Factsheet for GSMUA_Achr5P03280_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G095070.1	Barley	cytosol	58.71	77.83
GSMUA_Achr5P13670_001	Banana	plastid	75.78	73.11
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, golgi	62.54	67.61
CDY01971	Canola	endoplasmic reticulum, extracellular	48.61	67.07
GSMUA_Achr9P19890_001	Banana	cytosol	50.87	64.89
Zm00001d002625_P003	Maize	mitochondrion	68.12	61.29
KRH00647	Soybean	cytosol	57.49	61.22
KXG26943	Sorghum	plastid	68.12	61.0
TraesCS2D01G397900.1	Wheat	mitochondrion	67.25	60.5
TraesCS2A01G400300.1	Wheat	mitochondrion	66.72	60.41
GSMUA_Achr5P25650_001	Banana	cytosol	40.59	60.36
Zm00001d026079_P001	Maize	plastid	66.9	59.91
TraesCS2B01G418400.1	Wheat	golgi	66.55	59.87
Os04t0570800-02	Rice	golgi	67.07	59.6
GSMUA_Achr4P24710_001	Banana	cytosol	52.79	59.3
Os02t0675700-01	Rice	mitochondrion	65.51	58.2
HORVU6Hr1G065360.4	Barley	mitochondrion	64.81	57.67
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	64.46	57.54
TraesCS6D01G237200.1	Wheat	golgi	64.29	57.39
TraesCS6A01G256000.1	Wheat	mitochondrion	63.94	57.25
Zm00001d051442_P002	Maize	plasma membrane	64.11	56.88
KRG91450	Soybean	mitochondrion	59.41	56.83
KRH38569	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	61.85	56.08
EES05735	Sorghum	mitochondrion, plastid	64.81	55.86
KRH09116	Soybean	endoplasmic reticulum	61.5	55.85
VIT_15s0048g01940.t01	Wine grape	mitochondrion	60.28	54.75
KRH40534	Soybean	endoplasmic reticulum, mitochondrion, vacuole	59.23	54.66
VIT_16s0100g00570.t01	Wine grape	mitochondrion	62.37	54.57
PGSC0003DMT400071370	Potato	endoplasmic reticulum, golgi	60.45	54.56
PGSC0003DMT400037042	Potato	plastid	61.15	54.25
PGSC0003DMT400030542	Potato	plastid	59.93	54.0
Solyc01g009600.2.1	Tomato	plastid	59.58	53.94
Solyc01g091690.2.1	Tomato	plastid	59.58	53.77
Solyc03g026120.2.1	Tomato	plastid	60.8	53.69
Solyc06g035790.2.1	Tomato	plastid	60.28	53.15
PGSC0003DMT400065051	Potato	plastid	60.45	53.06
Bra008529.1-P	Field mustard	mitochondrion	57.32	52.98
GSMUA_Achr4P29040_001	Banana	cytosol, golgi, mitochondrion, peroxisome	55.57	52.55
AT4G00750.1	Thale cress	mitochondrion	57.49	52.13
GSMUA_Achr1P04180_001	Banana	cytosol	54.7	51.9
CDY18904	Canola	endoplasmic reticulum	57.14	51.82
CDY37061	Canola	endoplasmic reticulum, golgi, mitochondrion, plastid	56.62	51.75
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.97	51.74
CDX74761	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.97	51.74
GSMUA_Achr1P11480_001	Banana	cytosol	55.4	51.62
AT2G45750.1	Thale cress	endoplasmic reticulum, golgi	56.62	51.51
KRH48242	Soybean	endoplasmic reticulum	57.49	51.48
CDY54063	Canola	mitochondrion	49.65	51.44
Bra039319.1-P	Field mustard	golgi	56.62	51.42
GSMUA_Achr3P01520_001	Banana	endoplasmic reticulum, golgi	52.44	51.02
GSMUA_Achr3P20050_001	Banana	endoplasmic reticulum, golgi	51.22	49.83
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	51.05	47.49
GSMUA_Achr8P16940_001	Banana	endoplasmic reticulum, golgi	27.7	44.54
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	42.68	42.46
GSMUA_Achr4P27550_001	Banana	extracellular, plasma membrane	41.99	41.77
GSMUA_Achr4P18470_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	41.29	39.63
GSMUA_Achr11P...	Banana	golgi, mitochondrion	38.5	36.83
GSMUA_Achr9P03780_001	Banana	cytosol	35.89	36.65
GSMUA_Achr5P20080_001	Banana	mitochondrion	38.15	36.32
GSMUA_Achr5P28990_001	Banana	cytosol	34.15	35.19
GSMUA_Achr7P20830_001	Banana	endoplasmic reticulum, golgi, vacuole	36.24	34.15
GSMUA_Achr5P21350_001	Banana	endoplasmic reticulum	36.41	33.66
GSMUA_Achr1P20520_001	Banana	endoplasmic reticulum, golgi, vacuole	35.89	33.17
GSMUA_Achr6P36560_001	Banana	endoplasmic reticulum, golgi, vacuole	35.54	32.9
CDY27362	Canola	plasma membrane	56.97	32.41
GSMUA_Achr5P18010_001	Banana	nucleus	42.16	32.35
GSMUA_Achr8P32550_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	36.41	31.24
GSMUA_Achr3P09140_001	Banana	endoplasmic reticulum, golgi, vacuole	31.71	30.49
GSMUA_Achr4P18750_001	Banana	endoplasmic reticulum, golgi	32.93	30.39
GSMUA_Achr7P23260_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	36.06	28.36
GSMUA_Achr8P30140_001	Banana	nucleus	35.19	25.63
GSMUA_Achr6P05660_001	Banana	mitochondrion	30.66	25.25
GSMUA_Achr11P...	Banana	mitochondrion	36.41	25.09
GSMUA_Achr4P19870_001	Banana	golgi, mitochondrion	34.32	23.88
GSMUA_Achr8P08230_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	36.24	23.72

Protein Annotations

EnsemblPlants:GSMUA_Achr5P03280_001	EnsemblPlants:GSMUA_Achr5T03280_001	EnsemblPlantsGene:GSMUA_Achr5G03280_001	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTases	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1049	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335
UniParc:UPI0002952894	UniProt:M0SVA7	MapMan:35.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G03280_001]

Coordinates

chr5:-:2270210..2276538

Molecular Weight (calculated)

64217.2 Da

IEP (calculated)

8.835

GRAVY (calculated)

-0.345

Length

574 amino acids

Sequence
(BLAST)

001: MAGATTPSSG VWKLYQPYWK RTNLLQLGVR RLLRPEPPCH DNNCWRRDAG LRRPPRGGPV VDRVSGCPGI SGVRRQILGV HAVRGPDPVV AVRPEATHLP
101: GAALPGERRA PQVPDPGAAR AGQNWIRVDG DKFRFPGGGT MFPNGADTYI DDIDQLISLS DGSIRTAVDT GCGVASWGAY LLSRNVLTMS FAPKDSHEAQ
201: VQFALERGVP AMIGVLASIR LPYPSRAFDM AHCSRCLIQW HLYDGQYLME IDRILRPGGY WILSGPPINW KQHWKGWNRT KEDLSEVQSA IEAVARSLCW
301: NKLKEKGDIA IWQKPVNHIS CKANRKIIRS PQFCQSQDPD SAWYTKMETC IVPLPKVASP EETAGGAPKR WPERLTAVPP RIASGSVVGV TAETFLQDTE
401: LWKKRVGYYK KVIGQLGQAG RYRNLLDMNA NFGGFAAALI DDPLWVMNIV PTTSQVNTLG VIYERGLIGT YQDWCEAMST YPRTYDLLHA DSVFNLYKDR
501: CEMEDILLEM DRILRPEGTV IIRDDVDILV KIKSIADGMR WNSRIADHED GPLQREKLLL VVKTYWTAPG PDRQ

Best Arabidopsis Sequence Match ( AT4G00750.1 )
(BLAST)

001: MGNYRWPSKL SKLSLRAKQT NLYRVILIAI LCVTFYFVGV WQHSGRGISR SSISNHELTS VPCTFPHQTT PILNFASRHT APDLPPTITD ARVVQIPSCG
101: VEFSEYTPCE FVNRSLNFPR ERLIYRERHC PEKHEIVRCR IPAPYGYSLP FRWPESRDVA WFANVPHTEL TVEKKNQNWV RYEKDRFLFP GGGTMFPRGA
201: DAYIDEIGRL INLKDGSIRT AIDTGCGVAS FGAYLMSRNI VTMSFAPRDT HEAQVQFALE RGVPAIIGVL ASIRLPFPAR AFDIAHCSRC LIPWGQYNGT
301: YLIEVDRVLR PGGYWILSGP PINWQRHWKG WERTRDDLNS EQSQIERVAR SLCWRKLVQR EDLAVWQKPT NHVHCKRNRI ALGRPPFCHR TLPNQGWYTK
401: LETCLTPLPE VTGSEIKEVA GGQLARWPER LNALPPRIKS GSLEGITEDE FVSNTEKWQR RVSYYKKYDQ QLAETGRYRN FLDMNAHLGG FASALVDDPV
501: WVMNVVPVEA SVNTLGVIYE RGLIGTYQNW CEAMSTYPRT YDFIHADSVF SLYKDRCDME DILLEMDRIL RPKGSVIIRD DIDVLTKVKK ITDAMQWEGR
601: IGDHENGPLE REKILFLVKE YWTAPAPDQS SDP

Arabidopsis Description

Probable methyltransferase PMT15 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.