Factsheet for Solyc03g026120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037042	Potato	plastid	96.62	97.06
Solyc06g035790.2.1	Tomato	plastid	79.38	79.26
Solyc01g009600.2.1	Tomato	plastid	73.69	75.55
HORVU2Hr1G095070.1	Barley	cytosol	48.46	72.75
VIT_16s0100g00570.t01	Wine grape	mitochondrion	71.85	71.19
KRH38569	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	68.62	70.46
KRH09116	Soybean	endoplasmic reticulum	68.15	70.09
KRG91450	Soybean	mitochondrion	63.08	68.33
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, golgi	54.46	66.67
GSMUA_Achr5P13670_001	Banana	plastid	60.77	66.39
Solyc01g091690.2.1	Tomato	plastid	64.77	66.19
KXG26943	Sorghum	plastid	63.38	64.27
Zm00001d026079_P001	Maize	plastid	63.38	64.27
Zm00001d002625_P003	Maize	mitochondrion	62.92	64.11
Os04t0570800-02	Rice	golgi	63.69	64.09
TraesCS2A01G400300.1	Wheat	mitochondrion	62.31	63.88
TraesCS6D01G237200.1	Wheat	golgi	63.08	63.76
TraesCS6A01G256000.1	Wheat	mitochondrion	62.77	63.65
TraesCS2D01G397900.1	Wheat	mitochondrion	62.46	63.64
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	62.92	63.61
TraesCS2B01G418400.1	Wheat	golgi	62.31	63.48
Os02t0675700-01	Rice	mitochondrion	63.08	63.47
HORVU6Hr1G065360.4	Barley	mitochondrion	62.77	63.26
Zm00001d051442_P002	Maize	plasma membrane	62.15	62.44
EES05735	Sorghum	mitochondrion, plastid	62.46	60.96
GSMUA_Achr5P03280_001	Banana	plastid	53.69	60.8
Solyc08g013740.2.1	Tomato	unclear	57.23	58.95
Solyc03g116150.2.1	Tomato	nucleus	49.54	55.14
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	52.0	54.96
Solyc08g077240.2.1	Tomato	nucleus	51.38	54.22
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	50.62	53.76
Solyc01g010870.2.1	Tomato	nucleus, unclear	50.15	53.71
Solyc08g075870.2.1	Tomato	nucleus, unclear	41.54	45.23
Solyc08g005490.2.1	Tomato	nucleus, unclear	41.38	45.06
Solyc01g091640.2.1	Tomato	nucleus	39.38	42.74
Solyc09g090190.2.1	Tomato	nucleus	36.46	38.35
Solyc02g067890.2.1	Tomato	nucleus	35.85	38.2
Solyc03g005600.2.1	Tomato	nucleus, unclear	35.85	37.58
Solyc10g079450.1.1	Tomato	plasma membrane	32.92	35.02
Solyc06g051000.2.1	Tomato	plastid	32.77	33.18
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	34.15	32.74
Solyc04g058180.2.1	Tomato	plastid	31.85	32.04
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	35.54	30.08
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	32.92	27.44
Solyc05g056580.2.1	Tomato	golgi	34.31	27.43
Solyc04g080360.2.1	Tomato	nucleus	30.46	25.45
Solyc02g084670.2.1	Tomato	unclear	33.85	24.92

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:K4BF85
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1049	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc03g026120.2	EnsemblPlants:Solyc03g026120.2.1	TMHMM:TMhelix	UniParc:UPI0002769095	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:3530164..3533170

Molecular Weight (calculated)

73747.4 Da

IEP (calculated)

7.726

GRAVY (calculated)

-0.482

Length

650 amino acids

Sequence
(BLAST)

001: MAGSNQTPTP YYTPTSKPSP PNYPFSSWKK LNLYYSLAAI TFLCCACYYA GQLQHTTTNV GLHLSNTAST CFSSQNTTSP VSSSSPVSSS SQLDFTTHHS
101: AGDGAGGAVV PDDTVKIYPP CDVKYSEYTP CEDPTRSLKY NRDRLIYRER HCPEKSEFLK CRIPAPYGYK NPFKWPMSRD LAWYANVPHK ELTVEKAVQN
201: WIRFEGDRFR FPGGGTMFPN GADAYIDDIG KLINLKDGSI RTAIDTGCGV ASWGAYLLSR NILAISFAPR DTHEAQVQFA LERGVPALIG VIASKRLPYP
301: SRAFDMAHCS RCLIPWGEYD GTYLIEVDRV LRPGGYWILS GPPIHWRKYW KGWERTKQDL NAEQTKIEKV ARSLCWKKFV EKDDIAIWQK PYNHLQCKEL
401: RKASKNPPMC PAQDPDKAWY TDIETCLTSL PEVSSEEKVA GGQLEKWPKR LHAIPPRISR GTVNGVTSDT FNEDSQLWKR RVSYYKTVNN QLGQPGRYRN
501: LLDMNAYLGG FAANLVDDPV WVMNIVPPEA KVNTLGIIYE RGLIGTYQSW CEAMSTYPRT YDLIHADSVF TLYKDRCEME DILLEMDRIL RPEGSVIIRD
601: DVDTLIKVKR ITDGLNWDSQ IVDHEDGPLE REKLLFAVKS YWTAPSIQES

Best Arabidopsis Sequence Match ( AT4G00750.1 )
(BLAST)

001: MGNYRWPSKL SKLSLRAKQT NLYRVILIAI LCVTFYFVGV WQHSGRGISR SSISNHELTS VPCTFPHQTT PILNFASRHT APDLPPTITD ARVVQIPSCG
101: VEFSEYTPCE FVNRSLNFPR ERLIYRERHC PEKHEIVRCR IPAPYGYSLP FRWPESRDVA WFANVPHTEL TVEKKNQNWV RYEKDRFLFP GGGTMFPRGA
201: DAYIDEIGRL INLKDGSIRT AIDTGCGVAS FGAYLMSRNI VTMSFAPRDT HEAQVQFALE RGVPAIIGVL ASIRLPFPAR AFDIAHCSRC LIPWGQYNGT
301: YLIEVDRVLR PGGYWILSGP PINWQRHWKG WERTRDDLNS EQSQIERVAR SLCWRKLVQR EDLAVWQKPT NHVHCKRNRI ALGRPPFCHR TLPNQGWYTK
401: LETCLTPLPE VTGSEIKEVA GGQLARWPER LNALPPRIKS GSLEGITEDE FVSNTEKWQR RVSYYKKYDQ QLAETGRYRN FLDMNAHLGG FASALVDDPV
501: WVMNVVPVEA SVNTLGVIYE RGLIGTYQNW CEAMSTYPRT YDFIHADSVF SLYKDRCDME DILLEMDRIL RPKGSVIIRD DIDVLTKVKK ITDAMQWEGR
601: IGDHENGPLE REKILFLVKE YWTAPAPDQS SDP

Arabidopsis Description

Probable methyltransferase PMT15 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.