Factsheet for Solyc08g077240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	98.21	98.21
KRH57576	Soybean	endoplasmic reticulum	75.32	75.69
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	75.0	75.61
KRH04297	Soybean	endoplasmic reticulum	74.84	75.2
CDY70748	Canola	cytosol, peroxisome	49.19	70.47
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	69.81	69.35
CDX78823	Canola	endoplasmic reticulum, golgi, vacuole	69.81	69.35
AT4G18030.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	69.81	69.24
CDY03207	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	68.34	67.68
Solyc01g010870.2.1	Tomato	nucleus, unclear	66.56	67.55
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	66.72	67.16
Os10t0569300-01	Rice	golgi	65.91	67.11
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	65.75	67.05
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	65.58	66.89
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	65.1	66.39
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	65.91	66.02
Solyc03g116150.2.1	Tomato	nucleus	62.5	65.92
KXG38879	Sorghum	mitochondrion	64.45	65.73
Zm00001d030012_P001	Maize	golgi	63.47	64.74
CDY35169	Canola	cytosol, endoplasmic reticulum, golgi	68.34	58.07
Bra017538.1-P	Field mustard	golgi, plasma membrane	68.02	57.95
HORVU1Hr1G054470.1	Barley	mitochondrion, plastid	56.33	55.61
Solyc08g013740.2.1	Tomato	unclear	55.36	54.04
Solyc03g026120.2.1	Tomato	plastid	54.22	51.38
Solyc01g091690.2.1	Tomato	plastid	52.76	51.1
Solyc06g035790.2.1	Tomato	plastid	53.73	50.84
Solyc01g009600.2.1	Tomato	plastid	52.11	50.63
Solyc08g005490.2.1	Tomato	nucleus, unclear	40.42	41.71
Solyc08g075870.2.1	Tomato	nucleus, unclear	39.77	41.04
Solyc01g091640.2.1	Tomato	nucleus	39.29	40.4
Solyc09g090190.2.1	Tomato	nucleus	37.01	36.89
Solyc02g067890.2.1	Tomato	nucleus	36.2	36.56
Solyc03g005600.2.1	Tomato	nucleus, unclear	36.69	36.45
Solyc10g079450.1.1	Tomato	plasma membrane	33.93	34.21
Solyc06g051000.2.1	Tomato	plastid	33.6	32.24
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	35.39	32.15
Solyc04g058180.2.1	Tomato	plastid	32.63	31.11
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	36.53	29.3
Solyc05g056580.2.1	Tomato	golgi	36.36	27.55
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	34.58	27.31
Solyc02g084670.2.1	Tomato	unclear	35.39	24.69
Solyc04g080360.2.1	Tomato	nucleus	31.01	24.55

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005802	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0009505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030312	GO:GO:0032259
UniProt:K4CN84	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF954	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	EnsemblPlantsGene:Solyc08g077240.2	EnsemblPlants:Solyc08g077240.2.1	TMHMM:TMhelix	UniParc:UPI000276C2A4	:

Description

No Description!

Coordinates

chr8:-:61165350..61172442

Molecular Weight (calculated)

70148.0 Da

IEP (calculated)

7.586

GRAVY (calculated)

-0.382

Length

616 amino acids

Sequence
(BLAST)

001: MASKYHGPIN RTRRPISILI VIGLCCFCYL IGIWQKSGSG KGDKLALQVT EQTADCNVFP QTTLDFESHH NYVETVETSE LTVKRFKSCE AKYTDYTPCH
101: EQDRAMKFPR EDMIYRERHC PPDDEKLRCL ILAPKGYTTP FPWPKSRDYA YYANVPYKHL TVEKAVQNWV QFQGNVFKFP GGGTMFPRGA DAYIDELASV
201: VPIGSGMIRT ALDTGCGVAS WGAYLLKRNI LAMSFAPKDN HEAQVQFALE RGVPAVIGVL GSISLPFPSR SFDMSHCSRC LIPWASKEGM YMMEVDRVLR
301: PGGYWILSGP PLNWKTYHRV WNRTKENCRA EQRRIEEHAE LLCWEKKYEK GDVAIWRKNI NGKSCRRASA NICQTKDADN VWYKKMDACI TPYPDVKNSD
401: EVAGGELKKF PARLFAVPPR IANDLVSGVT VESYEEDNKL WKKHVTSYKR SISLLGTTRY HNIMDMNAGL GGFAAALDSP KLWVMNVVPT IAENTLGVVY
501: ERGLIGIYHD WCEGFSTYPR TYDLLHANRL FTLYQDKCEF EDILLEMDRV LRPEGAVILR DGVEVLNKVR KIAAGLRWDT KLLDHEDGPL VPEKIFVAVK
601: QYFVEGDEDQ STPNDD

Best Arabidopsis Sequence Match ( AT4G18030.1 )
(BLAST)

001: MGSKHNPPGN NRSRSTLSLL VVVGLCCFFY LLGAWQKSGF GKGDSIAMEI TKQAQCTDIV TDLDFEPHHN TVKIPHKADP KPVSFKPCDV KLKDYTPCQE
101: QDRAMKFPRE NMIYRERHCP PDNEKLRCLV PAPKGYMTPF PWPKSRDYVH YANAPFKSLT VEKAGQNWVQ FQGNVFKFPG GGTMFPQGAD AYIEELASVI
201: PIKDGSVRTA LDTGCGVASW GAYMLKRNVL TMSFAPRDNH EAQVQFALER GVPAIIAVLG SILLPYPARA FDMAQCSRCL IPWTANEGTY LMEVDRVLRP
301: GGYWVLSGPP INWKTWHKTW NRTKAELNAE QKRIEGIAES LCWEKKYEKG DIAIFRKKIN DRSCDRSTPV DTCKRKDTDD VWYKEIETCV TPFPKVSNEE
401: EVAGGKLKKF PERLFAVPPS ISKGLINGVD EESYQEDINL WKKRVTGYKR INRLIGSTRY RNVMDMNAGL GGFAAALESP KSWVMNVIPT INKNTLSVVY
501: ERGLIGIYHD WCEGFSTYPR TYDFIHASGV FSLYQHSCKL EDILLETDRI LRPEGIVIFR DEVDVLNDVR KIVDGMRWDT KLMDHEDGPL VPEKILVATK
601: QYWVAGDDGN NSPSSSNSEE E

Arabidopsis Description

Probable methyltransferase PMT14 [Source:UniProtKB/Swiss-Prot;Acc:Q94EJ6]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.