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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH57576 Soybean endoplasmic reticulum 95.27 95.27
VIT_02s0012g00580.t01 Wine grape endoplasmic reticulum, golgi 80.1 80.36
PGSC0003DMT400062230 Potato endoplasmic reticulum, golgi 75.69 75.32
CDY70748 Canola cytosol, peroxisome 52.69 75.12
Solyc08g077240.2.1 Tomato nucleus 75.2 74.84
Bra013282.1-P Field mustard endoplasmic reticulum, golgi, vacuole 74.23 73.39
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 74.06 73.23
AT4G18030.1 Thale cress endoplasmic reticulum, golgi, mitochondrion, plasma membrane 73.57 72.62
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 73.25 72.19
KRH70718 Soybean endoplasmic reticulum 70.31 71.0
KRH74853 Soybean endoplasmic reticulum, golgi 70.15 70.84
KRG99086 Soybean endoplasmic reticulum 69.66 70.23
TraesCS1A01G213400.1 Wheat endoplasmic reticulum, golgi 69.17 70.2
Os10t0569300-01 Rice golgi 69.17 70.08
KRH45909 Soybean endoplasmic reticulum 69.49 70.07
TraesCS1B01G226800.1 Wheat endoplasmic reticulum, golgi 69.0 70.03
TraesCS1D01G216200.1 Wheat endoplasmic reticulum, golgi 68.84 69.87
KXG38879 Sorghum mitochondrion 68.52 69.54
Zm00001d030012_P001 Maize golgi 67.54 68.54
KRH63351 Soybean endoplasmic reticulum 65.91 66.67
KRH54546 Soybean golgi 60.69 64.36
Bra017538.1-P Field mustard golgi, plasma membrane 72.76 61.69
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 72.76 61.52
KRH00647 Soybean cytosol 52.85 60.11
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 59.22 58.17
KRG91450 Soybean mitochondrion 54.16 55.33
KRH60099 Soybean cytosol 55.95 55.06
KRH09116 Soybean endoplasmic reticulum 56.28 54.59
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 55.95 54.19
KRH41379 Soybean cytosol 55.46 54.05
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 54.65 53.86
KRH48242 Soybean endoplasmic reticulum 52.85 50.55
KRH01812 Soybean extracellular, plasma membrane, vacuole 45.68 48.7
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 46.17 44.92
KRH39668 Soybean endoplasmic reticulum 43.23 44.39
KRH76381 Soybean cytosol, golgi, plasma membrane 42.41 43.55
KRH07708 Soybean cytosol 42.25 43.31
KRH07206 Soybean cytosol, golgi, plasma membrane 42.25 43.31
KRH07208 Soybean cytosol 41.76 42.38
KRH40535 Soybean plastid 40.78 41.88
KRH00643 Soybean endoplasmic reticulum, mitochondrion 40.29 41.44
KRH48238 Soybean endoplasmic reticulum 39.97 41.25
KRH65147 Soybean endoplasmic reticulum 39.64 40.7
KRH32196 Soybean golgi 35.89 37.16
KRH19571 Soybean golgi 35.89 37.1
KRH69085 Soybean endoplasmic reticulum, golgi 37.36 36.64
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 37.19 36.54
KRH34393 Soybean endoplasmic reticulum 36.87 36.39
KRH31698 Soybean endoplasmic reticulum 36.87 36.16
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 37.36 36.01
KRH73268 Soybean endoplasmic reticulum 34.75 35.8
KRG92410 Soybean endoplasmic reticulum, golgi 36.05 35.65
KRH14916 Soybean nucleus 34.58 35.63
KRH16455 Soybean endoplasmic reticulum, golgi 38.01 35.3
KRG97692 Soybean plastid 22.19 35.23
KRH72067 Soybean plastid 34.58 35.16
KRH18054 Soybean endoplasmic reticulum, golgi 38.01 35.14
KRG97843 Soybean endoplasmic reticulum 37.85 34.99
KRH73069 Soybean endoplasmic reticulum 37.52 34.95
KRH15065 Soybean nucleus 37.85 34.94
KRH33118 Soybean extracellular, golgi, plastid 34.26 34.65
KRH31030 Soybean endoplasmic reticulum, plasma membrane 37.52 34.33
KRH31179 Soybean plasma membrane 33.12 34.18
KRH53915 Soybean endoplasmic reticulum 38.01 28.91
KRH28732 Soybean endoplasmic reticulum 36.05 28.78
KRH05816 Soybean endoplasmic reticulum 32.63 28.61
KRH64022 Soybean endoplasmic reticulum 37.68 28.52
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 36.7 28.27
KRH69842 Soybean mitochondrion 37.85 28.09
KRH15210 Soybean mitochondrion 32.3 27.85
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 37.52 27.68
KRH40943 Soybean golgi 37.68 27.43
KRH53330 Soybean endoplasmic reticulum 37.19 27.31
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.03 27.22
Protein Annotations
EntrezGene:100527886Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02010395ncoils:CoilEnsemblPlantsGene:GLYMA_17G152700
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016740GO:GO:0032259
UniProt:I1MVC1EnsemblPlants:KRH04297ProteinID:KRH04297ProteinID:KRH04297.1ProteinID:KRH04298.1ProteinID:KRH04299.1
ProteinID:KRH04300.1PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF954InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI000233EC34:::
Description
hypothetical protein
Coordinates
chr17:+:12736004..12742355
Molecular Weight (calculated)
69428.7 Da
IEP (calculated)
8.476
GRAVY (calculated)
-0.355
Length
613 amino acids
Sequence
(BLAST)
001: MGSKTNASGY RARRPLSIFA VLGLCCFFYL LGAWQRSGSG KADKLALKVN NLMTGCTVLP NLSFESHHSD VEIVRPDVLK AKAFKPCDMK YTDYTPCQEQ
101: DQAMKFPREN MIYRERHCPA EKEKLHCLIP APEGYTTPFP WPKSRDYAYY ANVPYKSLTV EKAVQNWVQF QGNVFKFPGG GTMFPQGADA YIDELASVIP
201: IADGSVRTAL DTGCGVASWG AYLLKRNVLA MSFAPKDNHE AQVQFALERG VPAVIGVLGT IRLPYPSRAF DMAQCSRCLI PWTSNEGMYL MEVDRVLRPG
301: GYWILSGPPI NWKTYYQTWK RSKEDLKAEQ TKLEELAESL CWEKKYEKGD IAIWRKKIND KSCKRKSPNS CDLDNADDVW YQKMEVCKTP LPEVTSKTEV
401: AGGELQKFPA RLFAVPPRIA QGIIPGVTAE SYQEDNKLWK KHVNAYKRMN KLIGTTRYRN VMDMNAGLGG FAAVLESQKS WVMNVVPTIA ENTLGVVYER
501: GLIGIYHDWC EGFSTYPRTY DLIHANGLFS LYQDKCNLED ILLEMDRILR PEGAIIIRDE VDVLNKVKKI VRGMRWEAKL VDHEDGPLVP EKILVAVKVY
601: WVGTSKNKTS TEE
Best Arabidopsis Sequence Match ( AT4G18030.1 )
(BLAST)
001: MGSKHNPPGN NRSRSTLSLL VVVGLCCFFY LLGAWQKSGF GKGDSIAMEI TKQAQCTDIV TDLDFEPHHN TVKIPHKADP KPVSFKPCDV KLKDYTPCQE
101: QDRAMKFPRE NMIYRERHCP PDNEKLRCLV PAPKGYMTPF PWPKSRDYVH YANAPFKSLT VEKAGQNWVQ FQGNVFKFPG GGTMFPQGAD AYIEELASVI
201: PIKDGSVRTA LDTGCGVASW GAYMLKRNVL TMSFAPRDNH EAQVQFALER GVPAIIAVLG SILLPYPARA FDMAQCSRCL IPWTANEGTY LMEVDRVLRP
301: GGYWVLSGPP INWKTWHKTW NRTKAELNAE QKRIEGIAES LCWEKKYEKG DIAIFRKKIN DRSCDRSTPV DTCKRKDTDD VWYKEIETCV TPFPKVSNEE
401: EVAGGKLKKF PERLFAVPPS ISKGLINGVD EESYQEDINL WKKRVTGYKR INRLIGSTRY RNVMDMNAGL GGFAAALESP KSWVMNVIPT INKNTLSVVY
501: ERGLIGIYHD WCEGFSTYPR TYDFIHASGV FSLYQHSCKL EDILLETDRI LRPEGIVIFR DEVDVLNDVR KIVDGMRWDT KLMDHEDGPL VPEKILVATK
601: QYWVAGDDGN NSPSSSNSEE E
Arabidopsis Description
Probable methyltransferase PMT14 [Source:UniProtKB/Swiss-Prot;Acc:Q94EJ6]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.