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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • golgi 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH69085 Soybean endoplasmic reticulum, golgi 95.36 95.36
KRG92410 Soybean endoplasmic reticulum, golgi 86.88 87.58
KRH34393 Soybean endoplasmic reticulum 86.24 86.8
VIT_05s0049g01180.t01 Wine grape endoplasmic reticulum, golgi 81.44 83.17
Solyc09g090190.2.1 Tomato nucleus 80.0 80.91
PGSC0003DMT400044353 Potato endoplasmic reticulum, golgi 79.36 80.26
PGSC0003DMT400034882 Potato cytosol, endoplasmic reticulum, golgi, mitochondrion 78.88 79.64
Solyc03g005600.2.1 Tomato nucleus, unclear 78.4 79.03
AT4G14360.2 Thale cress endoplasmic reticulum, golgi 76.8 78.95
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 77.28 78.79
Bra014936.1-P Field mustard endoplasmic reticulum, golgi, vacuole 76.96 78.47
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 76.48 78.23
CDX94861 Canola endoplasmic reticulum, golgi 75.36 78.11
AT3G23300.1 Thale cress endoplasmic reticulum, golgi, vacuole 76.32 78.07
CDX92981 Canola endoplasmic reticulum, golgi 75.36 77.72
Bra001909.1-P Field mustard endoplasmic reticulum, golgi 75.36 77.72
GSMUA_Achr1P20520_001 Banana endoplasmic reticulum, golgi, vacuole 75.68 76.17
GSMUA_Achr6P36560_001 Banana endoplasmic reticulum, golgi, vacuole 75.52 76.13
Zm00001d032703_P006 Maize endoplasmic reticulum, golgi, vacuole 73.12 75.04
KRH32196 Soybean golgi 71.04 75.0
GSMUA_Achr5P21350_001 Banana endoplasmic reticulum 74.24 74.72
KRH19571 Soybean golgi 70.72 74.54
OQU91634 Sorghum endoplasmic reticulum, golgi 72.64 73.7
TraesCS1B01G170600.2 Wheat endoplasmic reticulum, golgi 72.32 73.38
Os10t0477100-01 Rice golgi 72.32 73.26
TraesCS1D01G153300.1 Wheat endoplasmic reticulum, golgi 72.0 73.05
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 71.36 71.47
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 72.48 71.23
TraesCS1A01G154400.2 Wheat golgi 71.04 70.59
Zm00001d014036_P002 Maize endoplasmic reticulum 71.84 68.65
KRH00647 Soybean cytosol 37.12 43.04
KRH33118 Soybean extracellular, golgi, plastid 40.48 41.75
KRH72067 Soybean plastid 40.16 41.63
KRG97692 Soybean plastid 24.8 40.16
KRH73268 Soybean endoplasmic reticulum 36.96 38.82
KRH45909 Soybean endoplasmic reticulum 37.76 38.82
KRH60099 Soybean cytosol 38.56 38.68
KRH14916 Soybean nucleus 36.8 38.66
KRH15065 Soybean nucleus 40.96 38.55
KRG99086 Soybean endoplasmic reticulum 37.44 38.49
KRH73069 Soybean endoplasmic reticulum 40.48 38.45
KRH01812 Soybean extracellular, plasma membrane, vacuole 35.36 38.43
KRH31179 Soybean plasma membrane 36.48 38.38
KRG91450 Soybean mitochondrion 36.8 38.33
KRH41379 Soybean cytosol 38.56 38.31
KRG97843 Soybean endoplasmic reticulum 40.64 38.31
KRH48238 Soybean endoplasmic reticulum 36.32 38.22
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 37.76 37.94
KRH16455 Soybean endoplasmic reticulum, golgi 40.0 37.88
KRH31030 Soybean endoplasmic reticulum, plasma membrane 40.32 37.61
KRH65147 Soybean endoplasmic reticulum 35.84 37.52
KRH63351 Soybean endoplasmic reticulum 36.32 37.46
KRH18054 Soybean endoplasmic reticulum, golgi 39.68 37.41
KRH57576 Soybean endoplasmic reticulum 36.48 37.19
KRH70718 Soybean endoplasmic reticulum 36.0 37.07
KRH40535 Soybean plastid 35.36 37.02
KRH74853 Soybean endoplasmic reticulum, golgi 35.84 36.9
KRH04297 Soybean endoplasmic reticulum 36.16 36.87
KRH00643 Soybean endoplasmic reticulum, mitochondrion 35.04 36.74
KRH76381 Soybean cytosol, golgi, plasma membrane 35.04 36.68
KRH48242 Soybean endoplasmic reticulum 37.44 36.51
KRH09116 Soybean endoplasmic reticulum 36.8 36.39
KRH39668 Soybean endoplasmic reticulum 34.72 36.35
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 36.8 36.33
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 36.32 36.03
KRH54546 Soybean golgi 33.12 35.81
KRH07708 Soybean cytosol 34.24 35.79
KRH07206 Soybean cytosol, golgi, plasma membrane 33.92 35.45
KRH07208 Soybean cytosol 34.24 35.43
KRH53915 Soybean endoplasmic reticulum 39.84 30.89
KRH28732 Soybean endoplasmic reticulum 37.92 30.86
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 39.04 30.65
KRH64022 Soybean endoplasmic reticulum 39.68 30.62
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 40.16 30.2
KRH40943 Soybean golgi 40.16 29.81
KRH69842 Soybean mitochondrion 38.88 29.42
KRH53330 Soybean endoplasmic reticulum 39.04 29.22
KRH05816 Soybean endoplasmic reticulum 32.64 29.18
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.88 29.14
KRH15210 Soybean mitochondrion 32.96 28.97
Protein Annotations
EntrezGene:100806600Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02006076EnsemblPlantsGene:GLYMA_10G006100GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1L7H1EnsemblPlants:KRH31698ProteinID:KRH31698ProteinID:KRH31698.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF704InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI000233D20ASEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:605546..612323
Molecular Weight (calculated)
70566.9 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.401
Length
625 amino acids
Sequence
(BLAST)
001: MTRGRYDGSP KKHLVASVCG VAVFLGLLYV FQRSIFGSQN SGSSALEYGS KSLKRLGASY LGSDDDADSK QDESSSSIAQ GDGEADIVPK SFPVCDDRHS
101: ELIPCLDRHL IYQMRLKLDL SLMEHYERHC PPAERRFNCL IPPPAGYKVP IKWPQSRDEV WKANIPHTHL AHEKSDQNWM IVKGEKIVFP GGGTHFHKGA
201: DKYIASIANM LNFSNNNLNN EGRLRTVLDV GCGVASFGAY LLSSDIIAMS LAPNDVHQNQ IQFALERGIP AYLGVLGTKR LPYPSRSFEL AHCSRCRIDW
301: LQRDGILLLE LDRLLRPGGY FAYSSPEAYA QDEEDQRIWR EMSALVGRMC WRIAAKRNQT VIWQKPLTNE CYMEREPGTR PPLCQSDDDP DAIWGVNMEA
401: CITPYSDHDN RAKGSGLAPW PARLTTPPPR LADFGYSNEM FEKDTELWQG RVENYWNLLG PKISSNTVRN VLDMKANMGS FAAALRGKDV WVMNVVPRDG
501: PNTLKLIYDR GLIGSIHDWC EAYSTYPRTY DLLHAWTVFS DIETRGCSPE DLLIEIDRLL RPTGFIIIRD KQHVIDFVKK YLTAMHWEAV ATADASADSD
601: QDGNEVIIVI QKKLWLTTES LRNTE
Best Arabidopsis Sequence Match ( AT3G23300.1 )
(BLAST)
001: MRGRSEGGKK KPVIVLLCVA SVVLVFVYLF FGSSNHKAIE YGRKLGLGGD DDDSTKKDDT SSSFYVEDVV GNGFTPRSFP VCDDRHSELI PCLDRNLIYQ
101: MRLKLDLSLM EHYERHCPPP ERRFNCLIPP PPGYKIPIKW PKSRDEVWKV NIPHTHLAHE KSDQNWMVVK GEKINFPGGG THFHYGADKY IASMANMLNF
201: PNNVLNNGGR LRTFLDVGCG VASFGGYLLA SEIMTMSLAP NDVHQNQIQF ALERGIPAYL GVLGTKRLPY PSRSFELAHC SRCRIDWLQR DGILLLELDR
301: VLRPGGYFAY SSPEAYAQDE EDLRIWREMS ALVGRMCWTI AAKRNQTVIW QKPLTNDCYL GREPGTQPPL CNSDSDPDAV YGVNMEACIT QYSDHDHKTK
401: GSGLAPWPAR LTSPPPRLAD FGYSTDIFEK DTETWRQRVD TYWDLLSPKI QSDTVRNIMD MKASMGSFAA ALKEKDVWVM NVVPEDGPNT LKLIYDRGLM
501: GAVHSWCEAF STYPRTYDLL HAWDIISDIK KRGCSAEDLL LEMDRILRPS GFILIRDKQS VVDLVKKYLK ALHWEAVETK TASESDQDSD NVILIVQKKL
601: WLTSESLRDL E
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBP4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.