Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 91.45 | 91.0 |
| VIT_05s0049g01180.t01 | Wine grape | endoplasmic reticulum, golgi | 80.59 | 80.07 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 81.74 | 79.78 |
| PGSC0003DMT400034882 | Potato | cytosol, endoplasmic reticulum, golgi, mitochondrion | 80.76 | 79.32 |
| Solyc09g090190.2.1 | Tomato | nucleus | 79.93 | 78.64 |
| Solyc03g005600.2.1 | Tomato | nucleus, unclear | 79.77 | 78.23 |
| PGSC0003DMT400044353 | Potato | endoplasmic reticulum, golgi | 79.28 | 77.99 |
| KRG92410 | Soybean | endoplasmic reticulum, golgi | 79.44 | 77.9 |
| KRH34393 | Soybean | endoplasmic reticulum | 78.78 | 77.13 |
| KRH31698 | Soybean | endoplasmic reticulum | 78.95 | 76.8 |
| KRH69085 | Soybean | endoplasmic reticulum, golgi | 78.95 | 76.8 |
| GSMUA_Achr1P20520_001 | Banana | endoplasmic reticulum, golgi, vacuole | 76.15 | 74.56 |
| GSMUA_Achr6P36560_001 | Banana | endoplasmic reticulum, golgi, vacuole | 75.33 | 73.87 |
| GSMUA_Achr5P21350_001 | Banana | endoplasmic reticulum | 73.68 | 72.14 |
| Os10t0477100-01 | Rice | golgi | 73.03 | 71.96 |
| Zm00001d032703_P006 | Maize | endoplasmic reticulum, golgi, vacuole | 71.71 | 71.59 |
| OQU91634 | Sorghum | endoplasmic reticulum, golgi | 71.88 | 70.94 |
| TraesCS1B01G170600.2 | Wheat | endoplasmic reticulum, golgi | 71.22 | 70.29 |
| TraesCS1D01G153300.1 | Wheat | endoplasmic reticulum, golgi | 71.22 | 70.29 |
| Zm00001d014036_P002 | Maize | endoplasmic reticulum | 72.37 | 67.28 |
| TraesCS1A01G154400.2 | Wheat | golgi | 69.57 | 67.25 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 60.36 | 59.97 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 39.97 | 40.5 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 37.83 | 38.4 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 40.95 | 38.02 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 35.69 | 36.84 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 37.17 | 36.69 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 41.12 | 36.66 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 41.78 | 36.6 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 36.51 | 36.33 |
| AT4G00740.1 | Thale cress | golgi | 35.86 | 36.33 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 37.66 | 36.29 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 35.53 | 36.0 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 37.17 | 35.7 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 35.03 | 34.92 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 34.38 | 34.66 |
| AT1G33170.1 | Thale cress | cytosol | 36.35 | 34.59 |
| AT4G00750.1 | Thale cress | mitochondrion | 35.86 | 34.44 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 34.38 | 33.66 |
| AT1G29470.1 | Thale cress | golgi | 40.62 | 32.08 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 39.64 | 31.3 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 40.62 | 29.79 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 40.13 | 27.26 |
| AT1G19430.1 | Thale cress | mitochondrion | 31.25 | 26.24 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:827079 | UniProt:A0A178V5A4 | ProteinID:AEE83426.1 | ProteinID:AEE83427.1 |
| ArrayExpress:AT4G14360 | EnsemblPlantsGene:AT4G14360 | RefSeq:AT4G14360 | TAIR:AT4G14360 | RefSeq:AT4G14360-TAIR-G | EnsemblPlants:AT4G14360.2 |
| TAIR:AT4G14360.2 | EMBL:AY059747 | EMBL:AY091393 | Unigene:At.22920 | ProteinID:CAB10215.1 | ProteinID:CAB78478.1 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008757 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0032259 | RefSeq:NP_001031639.1 | RefSeq:NP_567427.1 | ProteinID:OAP00848.1 | PFAM:PF03141 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR10108 | PANTHER:PTHR10108:SF704 | InterPro:Put_SAM_MeTrfase | UniProt:Q93YV7 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| TMHMM:TMhelix | UniParc:UPI00000A3F4C | SEG:seg | : | : | : |
Description
Probable methyltransferase PMT3 [Source:UniProtKB/Swiss-Prot;Acc:Q93YV7]
Coordinates
chr4:-:8267289..8271176
Molecular Weight (calculated)
69240.5 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.437
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGRSDGGQK KRVIALVCVA AVVLVFVYLF YGSSDHRASA IEYGRKLGLG GDDDDTKQDD TSSSFGVDDG FTPRSFPVCD DRHSELIPCL DRNLIYQMRL
101: KLDLSLMEHY ERHCPPPERR FNCLIPPPNG YKVPIKWPKS RDEVWKVNIP HTHLAHEKSD QNWMVVKGDK INFPGGGTHF HYGADKYIAS MANMLNYPNN
201: VLNNGGRLRT VFDVGCGVAS FGGYLLSSDI LTMSLAPNDV HQNQIQFALE RGIPASLGVL GTKRLPYPSR SFELSHCSRC RIDWLQRDGI LLLELDRVLR
301: PGGYFAYSSP EAYAQDEEDL RIWREMSALV ERMCWKIAAK RNQTVIWQKP LTNDCYLERE PGTQPPLCRS DNDPDAVWGV NMEACITSYS DHDHKTKGSG
401: LAPWPARLTS PPPRLADFGY STGMFEKDTE LWRQRVDTYW DLLSPRIESD TVRNIMDMKA SMGSFAAALK EKDVWVMNVV PEDGPNTLKL IYDRGLMGAV
501: HSWCEAFSTY PRTYDLLHAW DIISDIKKKG CSEVDLLLEM DRILRPSGFI IIRDKQRVVD FVKKYLKALH WEEVGTKTDS DSDQDSDNVV FIVQKKLWLT
601: SESLRDME
101: KLDLSLMEHY ERHCPPPERR FNCLIPPPNG YKVPIKWPKS RDEVWKVNIP HTHLAHEKSD QNWMVVKGDK INFPGGGTHF HYGADKYIAS MANMLNYPNN
201: VLNNGGRLRT VFDVGCGVAS FGGYLLSSDI LTMSLAPNDV HQNQIQFALE RGIPASLGVL GTKRLPYPSR SFELSHCSRC RIDWLQRDGI LLLELDRVLR
301: PGGYFAYSSP EAYAQDEEDL RIWREMSALV ERMCWKIAAK RNQTVIWQKP LTNDCYLERE PGTQPPLCRS DNDPDAVWGV NMEACITSYS DHDHKTKGSG
401: LAPWPARLTS PPPRLADFGY STGMFEKDTE LWRQRVDTYW DLLSPRIESD TVRNIMDMKA SMGSFAAALK EKDVWVMNVV PEDGPNTLKL IYDRGLMGAV
501: HSWCEAFSTY PRTYDLLHAW DIISDIKKKG CSEVDLLLEM DRILRPSGFI IIRDKQRVVD FVKKYLKALH WEEVGTKTDS DSDQDSDNVV FIVQKKLWLT
601: SESLRDME
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.