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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d032703_P006 Maize endoplasmic reticulum, golgi, vacuole 95.78 96.88
Zm00001d014036_P002 Maize endoplasmic reticulum 96.43 90.83
TraesCS1D01G153300.1 Wheat endoplasmic reticulum, golgi 90.75 90.75
TraesCS1B01G170600.2 Wheat endoplasmic reticulum, golgi 90.58 90.58
Os10t0477100-01 Rice golgi 90.58 90.44
TraesCS1A01G154400.2 Wheat golgi 88.64 86.8
GSMUA_Achr6P36560_001 Banana endoplasmic reticulum, golgi, vacuole 74.68 74.19
VIT_05s0049g01180.t01 Wine grape endoplasmic reticulum, golgi 73.7 74.18
GSMUA_Achr1P20520_001 Banana endoplasmic reticulum, golgi, vacuole 74.03 73.43
GSMUA_Achr5P21350_001 Banana endoplasmic reticulum 73.7 73.11
Solyc09g090190.2.1 Tomato nucleus 73.05 72.82
PGSC0003DMT400044353 Potato endoplasmic reticulum, golgi 72.89 72.65
KRH31698 Soybean endoplasmic reticulum 73.7 72.64
VIT_07s0005g03630.t01 Wine grape endoplasmic reticulum, golgi 73.05 72.58
PGSC0003DMT400034882 Potato cytosol, endoplasmic reticulum, golgi, mitochondrion 72.73 72.37
CDX94861 Canola endoplasmic reticulum, golgi 70.78 72.31
AT3G23300.1 Thale cress endoplasmic reticulum, golgi, vacuole 71.59 72.18
KRH34393 Soybean endoplasmic reticulum 72.56 71.98
Bra001909.1-P Field mustard endoplasmic reticulum, golgi 70.78 71.95
CDX92981 Canola endoplasmic reticulum, golgi 70.78 71.95
AT4G14360.2 Thale cress endoplasmic reticulum, golgi 70.94 71.88
KRH69085 Soybean endoplasmic reticulum, golgi 72.89 71.84
KRG92410 Soybean endoplasmic reticulum, golgi 72.24 71.77
Solyc03g005600.2.1 Tomato nucleus, unclear 72.08 71.61
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 70.78 71.36
KRH32196 Soybean golgi 68.51 71.28
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 71.59 71.13
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 70.78 71.13
KRH19571 Soybean golgi 68.34 70.99
CDX89824 Canola endoplasmic reticulum, golgi 71.43 70.97
CDY15505 Canola endoplasmic reticulum, golgi 71.43 70.97
Bra014936.1-P Field mustard endoplasmic reticulum, golgi, vacuole 70.62 70.96
AT1G04430.1 Thale cress endoplasmic reticulum, golgi 71.75 70.95
CDX86634 Canola endoplasmic reticulum, golgi 71.27 70.81
Bra030570.1-P Field mustard endoplasmic reticulum, golgi 71.1 70.65
Bra015316.1-P Field mustard endoplasmic reticulum, golgi 71.43 70.63
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 69.97 69.07
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 70.29 68.08
OQU77908 Sorghum plasma membrane, plastid 39.45 39.13
EER96732 Sorghum endoplasmic reticulum, golgi 38.47 38.35
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 37.82 38.2
KXG38879 Sorghum mitochondrion 37.18 37.91
EES03874 Sorghum mitochondrion 42.05 37.65
EER89033 Sorghum cytosol 37.5 37.26
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 35.23 37.03
EER93951 Sorghum peroxisome 38.15 36.89
KXG26943 Sorghum plastid 37.99 36.51
EES11713 Sorghum plastid 41.07 35.84
EER94413 Sorghum plasma membrane 34.9 35.07
EES08791 Sorghum golgi 35.88 35.02
EES05735 Sorghum mitochondrion, plastid 37.5 34.68
EES03991 Sorghum plastid 40.42 31.48
OQU88046 Sorghum plastid 31.49 31.29
OQU87776 Sorghum endoplasmic reticulum, golgi 33.44 30.43
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 38.96 26.85
OQU77087 Sorghum mitochondrion 37.82 25.24
KXG23110 Sorghum endoplasmic reticulum 38.96 22.06
EER93372 Sorghum mitochondrion 33.6 15.8
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1UniProt:A0A1B6QK79GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259ProteinID:KXG38332.1ProteinID:KXG38333.1EnsemblPlants:OQU91634ProteinID:OQU91634ProteinID:OQU91634.1
PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF704InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3001G219800
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0003C6C87DSEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:20679494..20684986
Molecular Weight (calculated)
69880.6 Da
IEP (calculated)
6.752
GRAVY (calculated)
-0.396
Length
616 amino acids
Sequence
(BLAST)
001: MRGRNDSGHS KRPVVLCCVM IVCLCLLFLY FSGSKGQAGT TAFEYGTKFS RSLGWGSDDG DDGSEESIFG TGDADDVKPK SFPVCDDRHS ELIPCLDRNL
101: IYQMRLKLDL NLMEHYERHC PPPERRFNCL IPPPHGYKVP IKWPKSRDVV WKANIPHTHL AKEKSDQNWM VEAGEKIKFP GGGTHFHHGA DKYISNIANM
201: LNFKDNNINN EGMLRTVLDV GCGVASFGGY LLSSNVIAMS LAPNDVHQNQ IQFALERGIP AYLGVLGTKR LPYPSRSFEL AHCSRCRIDW LQRDGILLLE
301: LDRLLRPGGY FAYSSPEAYA QDEEDLRIWK EMSALVERMC WKIAEKRNQT VIWVKPLNND CYKRRAHGTK PPLCKSGDDP DSVWGVPMEA CITPYPEQMH
401: RDGGTGLAPW PARLTTPPPR LADLYVTADT FEKDTEMWQQ RVENYWSLLG PKVKSDAIRN IMDMKANFGS FAAALKEKDV WVMNVVPHDG PSTLKIIYDR
501: GLIGSNHDWC EAFSTYPRTY DLLHAWAVFS DLDKRGCSAE DLLLEMDRIL RPTGFAIVRD KSTIIEFIKK YLHALHWEAI TVVDAEPNPE SEENEMILII
601: RKKLWLPEAG SHVSST
Best Arabidopsis Sequence Match ( AT1G04430.2 )
(BLAST)
001: MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE
Arabidopsis Description
Probable methyltransferase PMT8 [Source:UniProtKB/Swiss-Prot;Acc:Q940J9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.