Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94861 | Canola | endoplasmic reticulum, golgi | 92.96 | 94.2 |
| Bra001909.1-P | Field mustard | endoplasmic reticulum, golgi | 93.29 | 94.06 |
| CDX92981 | Canola | endoplasmic reticulum, golgi | 93.29 | 94.06 |
| CDX85084 | Canola | endoplasmic reticulum, golgi, vacuole | 93.29 | 93.29 |
| CDY68608 | Canola | endoplasmic reticulum, golgi, vacuole | 93.29 | 92.99 |
| Bra014936.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 92.64 | 92.33 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 91.0 | 91.45 |
| VIT_05s0049g01180.t01 | Wine grape | endoplasmic reticulum, golgi | 79.87 | 79.74 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 80.03 | 78.49 |
| PGSC0003DMT400034882 | Potato | cytosol, endoplasmic reticulum, golgi, mitochondrion | 78.23 | 77.22 |
| KRH31698 | Soybean | endoplasmic reticulum | 78.07 | 76.32 |
| KRH69085 | Soybean | endoplasmic reticulum, golgi | 78.07 | 76.32 |
| KRG92410 | Soybean | endoplasmic reticulum, golgi | 77.41 | 76.29 |
| Solyc09g090190.2.1 | Tomato | nucleus | 77.09 | 76.21 |
| KRH34393 | Soybean | endoplasmic reticulum | 77.41 | 76.17 |
| Solyc03g005600.2.1 | Tomato | nucleus, unclear | 77.09 | 75.97 |
| PGSC0003DMT400044353 | Potato | endoplasmic reticulum, golgi | 76.27 | 75.4 |
| GSMUA_Achr1P20520_001 | Banana | endoplasmic reticulum, golgi, vacuole | 74.3 | 73.11 |
| Zm00001d032703_P006 | Maize | endoplasmic reticulum, golgi, vacuole | 72.34 | 72.58 |
| GSMUA_Achr6P36560_001 | Banana | endoplasmic reticulum, golgi, vacuole | 73.32 | 72.26 |
| Os10t0477100-01 | Rice | golgi | 72.83 | 72.12 |
| OQU91634 | Sorghum | endoplasmic reticulum, golgi | 72.18 | 71.59 |
| GSMUA_Achr5P21350_001 | Banana | endoplasmic reticulum | 72.5 | 71.34 |
| TraesCS1B01G170600.2 | Wheat | endoplasmic reticulum, golgi | 71.69 | 71.1 |
| TraesCS1D01G153300.1 | Wheat | endoplasmic reticulum, golgi | 71.52 | 70.94 |
| TraesCS1A01G154400.2 | Wheat | golgi | 70.21 | 68.2 |
| Zm00001d014036_P002 | Maize | endoplasmic reticulum | 72.34 | 67.58 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 60.23 | 60.13 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 40.1 | 40.83 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 38.3 | 39.07 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 40.59 | 37.86 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 35.84 | 37.18 |
| AT4G00740.1 | Thale cress | golgi | 36.33 | 37.0 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 36.82 | 36.53 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 40.43 | 36.22 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 37.48 | 36.18 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 40.92 | 36.02 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 35.19 | 35.83 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 36.99 | 35.82 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 35.35 | 35.35 |
| AT1G33170.1 | Thale cress | cytosol | 36.66 | 35.05 |
| AT4G00750.1 | Thale cress | mitochondrion | 36.01 | 34.76 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 34.7 | 34.75 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 34.04 | 34.49 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 34.04 | 33.49 |
| AT1G29470.1 | Thale cress | golgi | 39.77 | 31.56 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 38.79 | 30.78 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 40.26 | 29.67 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 40.1 | 27.37 |
| AT1G19430.1 | Thale cress | mitochondrion | 30.77 | 25.97 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:821910 | UniProt:A0A178VBP4 | ProteinID:AEE76749.1 | ProteinID:ANM65095.1 |
| ArrayExpress:AT3G23300 | EnsemblPlantsGene:AT3G23300 | RefSeq:AT3G23300 | TAIR:AT3G23300 | RefSeq:AT3G23300-TAIR-G | EnsemblPlants:AT3G23300.1 |
| TAIR:AT3G23300.1 | EMBL:AY035138 | ProteinID:BAB02273.1 | EMBL:BT000890 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0032259 | RefSeq:NP_001327090.1 | RefSeq:NP_566725.2 | ProteinID:OAP03619.1 | PFAM:PF03141 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF704 | InterPro:Put_SAM_MeTrfase | UniProt:Q8H118 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI00000A7FF9 | SEG:seg | : | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBP4]
Coordinates
chr3:+:8332797..8336235
Molecular Weight (calculated)
69360.0 Da
IEP (calculated)
6.711
GRAVY (calculated)
-0.380
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGRSEGGKK KPVIVLLCVA SVVLVFVYLF FGSSNHKAIE YGRKLGLGGD DDDSTKKDDT SSSFYVEDVV GNGFTPRSFP VCDDRHSELI PCLDRNLIYQ
101: MRLKLDLSLM EHYERHCPPP ERRFNCLIPP PPGYKIPIKW PKSRDEVWKV NIPHTHLAHE KSDQNWMVVK GEKINFPGGG THFHYGADKY IASMANMLNF
201: PNNVLNNGGR LRTFLDVGCG VASFGGYLLA SEIMTMSLAP NDVHQNQIQF ALERGIPAYL GVLGTKRLPY PSRSFELAHC SRCRIDWLQR DGILLLELDR
301: VLRPGGYFAY SSPEAYAQDE EDLRIWREMS ALVGRMCWTI AAKRNQTVIW QKPLTNDCYL GREPGTQPPL CNSDSDPDAV YGVNMEACIT QYSDHDHKTK
401: GSGLAPWPAR LTSPPPRLAD FGYSTDIFEK DTETWRQRVD TYWDLLSPKI QSDTVRNIMD MKASMGSFAA ALKEKDVWVM NVVPEDGPNT LKLIYDRGLM
501: GAVHSWCEAF STYPRTYDLL HAWDIISDIK KRGCSAEDLL LEMDRILRPS GFILIRDKQS VVDLVKKYLK ALHWEAVETK TASESDQDSD NVILIVQKKL
601: WLTSESLRDL E
101: MRLKLDLSLM EHYERHCPPP ERRFNCLIPP PPGYKIPIKW PKSRDEVWKV NIPHTHLAHE KSDQNWMVVK GEKINFPGGG THFHYGADKY IASMANMLNF
201: PNNVLNNGGR LRTFLDVGCG VASFGGYLLA SEIMTMSLAP NDVHQNQIQF ALERGIPAYL GVLGTKRLPY PSRSFELAHC SRCRIDWLQR DGILLLELDR
301: VLRPGGYFAY SSPEAYAQDE EDLRIWREMS ALVGRMCWTI AAKRNQTVIW QKPLTNDCYL GREPGTQPPL CNSDSDPDAV YGVNMEACIT QYSDHDHKTK
401: GSGLAPWPAR LTSPPPRLAD FGYSTDIFEK DTETWRQRVD TYWDLLSPKI QSDTVRNIMD MKASMGSFAA ALKEKDVWVM NVVPEDGPNT LKLIYDRGLM
501: GAVHSWCEAF STYPRTYDLL HAWDIISDIK KRGCSAEDLL LEMDRILRPS GFILIRDKQS VVDLVKKYLK ALHWEAVETK TASESDQDSD NVILIVQKKL
601: WLTSESLRDL E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.