Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000959.1-P | Field mustard | plastid | 94.5 | 94.97 |
| CDX91893 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 94.33 | 94.81 |
| CDX74348 | Canola | plastid | 94.17 | 94.64 |
| CDY07198 | Canola | mitochondrion | 92.17 | 92.32 |
| CDY51142 | Canola | cytosol | 89.83 | 87.36 |
| VIT_15s0048g01990.t01 | Wine grape | mitochondrion | 82.0 | 82.41 |
| PGSC0003DMT400071375 | Potato | mitochondrion | 81.33 | 81.47 |
| Solyc01g091640.2.1 | Tomato | nucleus | 80.83 | 80.97 |
| Bra037356.1-P | Field mustard | mitochondrion | 90.67 | 78.61 |
| KRH65147 | Soybean | endoplasmic reticulum | 76.83 | 77.22 |
| KRH48238 | Soybean | endoplasmic reticulum | 76.17 | 76.94 |
| KRH00643 | Soybean | endoplasmic reticulum, mitochondrion | 75.5 | 76.01 |
| KRH40535 | Soybean | plastid | 74.67 | 75.04 |
| GSMUA_Achr5P20080_001 | Banana | mitochondrion | 71.17 | 70.81 |
| GSMUA_Achr11P... | Banana | golgi, mitochondrion | 68.67 | 68.67 |
| TraesCS2B01G419000.1 | Wheat | golgi, plastid | 63.5 | 65.92 |
| TraesCS2D01G398400.1 | Wheat | golgi, mitochondrion, plastid | 63.5 | 65.8 |
| TraesCS2A01G400900.1 | Wheat | golgi, mitochondrion | 63.0 | 65.62 |
| HORVU6Hr1G056160.1 | Barley | cytosol | 50.0 | 64.66 |
| Os04t0569400-00 | Rice | golgi, mitochondrion | 62.83 | 64.33 |
| KXG26938 | Sorghum | endoplasmic reticulum, golgi, mitochondrion, plastid | 62.33 | 63.82 |
| HORVU2Hr1G095160.7 | Barley | plastid | 63.33 | 63.44 |
| Zm00001d002631_P003 | Maize | endoplasmic reticulum, golgi, mitochondrion, plastid | 62.0 | 62.63 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 42.67 | 41.22 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 42.0 | 40.91 |
| AT4G00750.1 | Thale cress | mitochondrion | 42.5 | 40.28 |
| AT1G33170.1 | Thale cress | cytosol | 42.33 | 39.75 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 41.67 | 39.49 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 39.17 | 39.17 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 39.67 | 38.95 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 39.0 | 38.81 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 40.67 | 38.67 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 37.0 | 36.33 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 36.33 | 35.86 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 35.0 | 35.65 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 36.17 | 34.83 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 35.17 | 34.48 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 33.83 | 33.83 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 34.33 | 33.77 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 32.83 | 32.89 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 35.67 | 32.67 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 35.5 | 31.23 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 35.33 | 30.55 |
| AT1G29470.1 | Thale cress | golgi | 37.33 | 29.09 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 36.5 | 28.44 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 36.17 | 26.18 |
| AT1G19430.1 | Thale cress | mitochondrion | 30.0 | 24.86 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 36.33 | 24.36 |
Protein Annotations
| MapMan:21.3.1.1.2 | Gene3D:3.40.50.150 | EntrezGene:828020 | ProteinID:AAD17338.1 | ProteinID:AEE81928.1 | ProteinID:ANM66439.1 |
| ArrayExpress:AT4G00740 | EnsemblPlantsGene:AT4G00740 | RefSeq:AT4G00740 | TAIR:AT4G00740 | RefSeq:AT4G00740-TAIR-G | EnsemblPlants:AT4G00740.1 |
| TAIR:AT4G00740.1 | EMBL:AY059835 | EMBL:AY059913 | EMBL:BT000151 | EMBL:BT008377 | ProteinID:CAB80883.1 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0032259 | GO:GO:0052546 | RefSeq:NP_001328335.1 | RefSeq:NP_567184.1 |
| PFAM:PF03141 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF763 | InterPro:Put_SAM_MeTrfase | UniProt:Q93W95 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI00000AC0FA | SEG:seg | : | : |
Description
Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
Coordinates
chr4:-:306869..310484
Molecular Weight (calculated)
67558.8 Da
IEP (calculated)
9.059
GRAVY (calculated)
-0.215
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.