Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 4
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70565 | Canola | endoplasmic reticulum | 91.34 | 91.94 |
| CDX78577 | Canola | endoplasmic reticulum, golgi | 91.01 | 91.61 |
| Bra006254.1-P | Field mustard | endoplasmic reticulum, golgi | 91.01 | 91.61 |
| Solyc02g067890.2.1 | Tomato | nucleus | 69.61 | 69.84 |
| PGSC0003DMT400017929 | Potato | endoplasmic reticulum, golgi | 69.44 | 69.67 |
| TraesCS3A01G475800.1 | Wheat | cytosol | 56.86 | 69.32 |
| GSMUA_Achr7P20830_001 | Banana | endoplasmic reticulum, golgi, vacuole | 65.36 | 65.68 |
| Os06t0687450-01 | Rice | endoplasmic reticulum, golgi | 64.38 | 65.56 |
| TraesCS7A01G444200.1 | Wheat | plastid | 64.71 | 65.13 |
| TraesCS7D01G433000.1 | Wheat | plastid | 64.71 | 64.6 |
| TraesCS7B01G342700.1 | Wheat | plastid | 64.54 | 64.44 |
| HORVU7Hr1G100920.3 | Barley | plastid | 62.58 | 64.05 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 59.97 | 60.36 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 60.13 | 60.23 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 58.99 | 57.95 |
| Zm00001d036545_P001 | Maize | golgi | 50.49 | 56.59 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 39.87 | 40.67 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 38.07 | 38.9 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 35.62 | 37.01 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 36.76 | 36.53 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 35.95 | 36.07 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 37.09 | 35.97 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 38.4 | 35.88 |
| AT1G33170.1 | Thale cress | cytosol | 37.25 | 35.68 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 35.62 | 35.68 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 39.71 | 35.63 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 34.8 | 35.5 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 36.44 | 35.23 |
| AT4G00740.1 | Thale cress | golgi | 34.48 | 35.17 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 39.54 | 34.87 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 33.99 | 34.49 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 34.64 | 34.14 |
| AT4G00750.1 | Thale cress | mitochondrion | 35.29 | 34.12 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 38.24 | 30.39 |
| AT1G29470.1 | Thale cress | golgi | 37.75 | 30.0 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 37.42 | 27.62 |
| AT1G19430.1 | Thale cress | mitochondrion | 30.56 | 25.83 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 37.75 | 25.81 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:831294 | UniProt:A0A178UH64 | ProteinID:AED92032.1 | EMBL:AK222240 |
| ArrayExpress:AT5G14430 | EnsemblPlantsGene:AT5G14430 | RefSeq:AT5G14430 | TAIR:AT5G14430 | RefSeq:AT5G14430-TAIR-G | EnsemblPlants:AT5G14430.1 |
| TAIR:AT5G14430.1 | EMBL:AY063807 | EMBL:AY113997 | Unigene:At.5178 | ProteinID:CAB87782.1 | GO:GO:0000139 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005802 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0009505 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0030312 | GO:GO:0032259 | RefSeq:NP_196947.2 | ProteinID:OAO92594.1 |
| PFAM:PF03141 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF692 | InterPro:Put_SAM_MeTrfase | UniProt:Q8VZV7 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI00000A36E4 | SEG:seg | : |
Description
Probable methyltransferase PMT9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZV7]
Coordinates
chr5:+:4652915..4655973
Molecular Weight (calculated)
69867.4 Da
IEP (calculated)
9.069
GRAVY (calculated)
-0.333
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHFRTERVR ATPKLFTYVL VGFIALLGLT CLYYGSSFAP GSRKSDEFDG SNNRVRTGIG SLRNRDIVLA VSRFEVPKSV PICDSRHSEL IPCLDRNLHY
101: QLKLKLNLSL MEHYEHHCPP SERRFNCLVP PPVGYKIPLR WPVSRDEVWK ANIPHTHLAQ EKSDQNWMVV NGDKINFPGG GTHFHNGADK YIVSLAQMLK
201: FPGDKLNNGG SIRNVLDVGC GVASFGAYLL SHDIIAMSLA PNDVHQNQIQ FALERGIPST LGVLGTKRLP YPSRSFELAH CSRCRIDWLQ RDGILLLELD
301: RLLRPGGYFV YSSPEAYAHD PENRKIGNAM HDLFKRMCWK VVAKRDQSVI WGKPISNSCY LKRDPGVLPP LCPSGDDPDA TWNVSMKACI SPYSVRMHKE
401: RWSGLVPWPR RLTAPPPRLE EIGVTPEQFR EDTETWRLRV IEYWKLLKPM VQKNSIRNVM DMSSNLGGFA AALNDKDVWV MNVMPVQSSP RMKIIYDRGL
501: IGATHDWCEA FDTYPRTFDL IHAWNTFTET QARGCSFEDL LIEMDRILRP EGFVIIRDTT DNISYIKKYL TLLKWDKWST ETTPKGDPLS TKDEIVLIAR
601: KKLWSLPAIS VS
101: QLKLKLNLSL MEHYEHHCPP SERRFNCLVP PPVGYKIPLR WPVSRDEVWK ANIPHTHLAQ EKSDQNWMVV NGDKINFPGG GTHFHNGADK YIVSLAQMLK
201: FPGDKLNNGG SIRNVLDVGC GVASFGAYLL SHDIIAMSLA PNDVHQNQIQ FALERGIPST LGVLGTKRLP YPSRSFELAH CSRCRIDWLQ RDGILLLELD
301: RLLRPGGYFV YSSPEAYAHD PENRKIGNAM HDLFKRMCWK VVAKRDQSVI WGKPISNSCY LKRDPGVLPP LCPSGDDPDA TWNVSMKACI SPYSVRMHKE
401: RWSGLVPWPR RLTAPPPRLE EIGVTPEQFR EDTETWRLRV IEYWKLLKPM VQKNSIRNVM DMSSNLGGFA AALNDKDVWV MNVMPVQSSP RMKIIYDRGL
501: IGATHDWCEA FDTYPRTFDL IHAWNTFTET QARGCSFEDL LIEMDRILRP EGFVIIRDTT DNISYIKKYL TLLKWDKWST ETTPKGDPLS TKDEIVLIAR
601: KKLWSLPAIS VS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.