Factsheet for PGSC0003DMT400017929

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g067890.2.1	Tomato	nucleus	98.36	98.36
CDX70565	Canola	endoplasmic reticulum	70.49	70.72
Bra006254.1-P	Field mustard	endoplasmic reticulum, golgi	70.33	70.56
TraesCS3A01G475800.1	Wheat	cytosol	57.87	70.32
CDX78577	Canola	endoplasmic reticulum, golgi	70.0	70.23
AT5G14430.1	Thale cress	endoplasmic reticulum	69.67	69.44
GSMUA_Achr7P20830_001	Banana	endoplasmic reticulum, golgi, vacuole	66.89	67.0
Os06t0687450-01	Rice	endoplasmic reticulum, golgi	64.92	65.89
TraesCS7A01G444200.1	Wheat	plastid	63.93	64.14
HORVU7Hr1G100920.3	Barley	plastid	62.62	63.88
TraesCS7D01G433000.1	Wheat	plastid	63.77	63.46
TraesCS7B01G342700.1	Wheat	plastid	63.44	63.13
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	60.98	60.19
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	59.67	58.8
Zm00001d036545_P001	Maize	golgi	49.18	54.95
PGSC0003DMT400027588	Potato	endoplasmic reticulum, plasma membrane, plastid	36.39	38.74
PGSC0003DMT400014851	Potato	cytosol	39.34	38.46
PGSC0003DMT400016774	Potato	endoplasmic reticulum, golgi	38.36	38.24
PGSC0003DMT400059283	Potato	cytosol	34.75	38.2
PGSC0003DMT400071370	Potato	endoplasmic reticulum, golgi	38.69	37.11
PGSC0003DMT400080300	Potato	endoplasmic reticulum, golgi	37.21	37.09
PGSC0003DMT400079286	Potato	cytosol	36.07	36.85
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	37.05	36.69
PGSC0003DMT400030542	Potato	plastid	38.2	36.58
PGSC0003DMT400069743	Potato	endoplasmic reticulum, golgi	36.72	36.54
PGSC0003DMT400071375	Potato	mitochondrion	35.74	36.39
PGSC0003DMT400065051	Potato	plastid	39.02	36.39
PGSC0003DMT400050242	Potato	golgi	36.72	36.36
PGSC0003DMT400037042	Potato	plastid	38.52	36.32
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	35.41	36.18
PGSC0003DMT400069783	Potato	endoplasmic reticulum	40.16	36.14
PGSC0003DMT400077225	Potato	plastid	37.21	35.3
PGSC0003DMT400006139	Potato	nucleus	38.85	29.74
PGSC0003DMT400059933	Potato	golgi	38.85	29.15
PGSC0003DMT400009110	Potato	cytosol	37.05	27.56
PGSC0003DMT400009562	Potato	golgi, mitochondrion	30.82	24.16

Protein Annotations

EntrezGene:102593832	Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773
GO:GO:0005774	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030312	GO:GO:0032259
UniProt:M1A9R3	PFAM:PF03141	EnsemblPlantsGene:PGSC0003DMG400006963	PGSC:PGSC0003DMG400006963	EnsemblPlants:PGSC0003DMT400017929	PANTHER:PTHR10108
PANTHER:PTHR10108:SF692	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002968C8E
RefSeq:XP_006357164.1	RefSeq:XP_006357165.1	SEG:seg	:	:	:

Description

S-adenosylmethionine-dependent methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400006963]

Coordinates

chr2:-:26582917..26587189

Molecular Weight (calculated)

70071.2 Da

IEP (calculated)

8.171

GRAVY (calculated)

-0.313

Length

610 amino acids

Sequence
(BLAST)

001: MKQKKELSHR PKLLKYVLFG MIVFLGLVCL YNCSFMGPGL PIARDPLAID DGSDPVTGIS YHGRMDMDME DQELEVPKSI PVCDMSYSEL IPCLDRNLIY
101: QLRLRLNLTV MEHYERHCPP PQRRFNCLIP PPAGYKIPIR WPASRDQVWK ANIPHTHLAQ EKSDQNWMIV DGDKIKFPGG GTHFHYGADI YIAAIAGMLK
201: LPGEKLSNGG NIRNVLDVGC GVASFGAYLL SHDIIAMSLA PNDVHENQIQ FALERGIPST LGVLGTKRLP YPSRSFELAH CSRCRIDWLQ RDGILLLELD
301: RLLRPGGYFV YSSPEAYAHD AENRRIWNAM YDLLRRMCWR VVSRRDQTVI WAKPLSNSCY MKRSRGTQPP LCMSGDEPDE SWNVPMKACI TPYSAKVHKE
401: KGTGLEPWPR RLMAPPPRLE EIGVTLDEFH KDTNVWHERV VDYWKQMKSV ILKNSVRNVM DMNSNLGGFA AALKDKDIWV MNVAPVNMSS RLKIIYDRGL
501: IGTVHDWCES FSTYPRTYDL LHAWMILSET EDRGCSIEDL LIEMDRMLRP EGFIIIRDKP HIINSVRKFM PALKWDGWSS EVEPRTDALS LSEERILIAR
601: KKFWREKLTI

Best Arabidopsis Sequence Match ( AT5G14430.1 )
(BLAST)

001: MKHFRTERVR ATPKLFTYVL VGFIALLGLT CLYYGSSFAP GSRKSDEFDG SNNRVRTGIG SLRNRDIVLA VSRFEVPKSV PICDSRHSEL IPCLDRNLHY
101: QLKLKLNLSL MEHYEHHCPP SERRFNCLVP PPVGYKIPLR WPVSRDEVWK ANIPHTHLAQ EKSDQNWMVV NGDKINFPGG GTHFHNGADK YIVSLAQMLK
201: FPGDKLNNGG SIRNVLDVGC GVASFGAYLL SHDIIAMSLA PNDVHQNQIQ FALERGIPST LGVLGTKRLP YPSRSFELAH CSRCRIDWLQ RDGILLLELD
301: RLLRPGGYFV YSSPEAYAHD PENRKIGNAM HDLFKRMCWK VVAKRDQSVI WGKPISNSCY LKRDPGVLPP LCPSGDDPDA TWNVSMKACI SPYSVRMHKE
401: RWSGLVPWPR RLTAPPPRLE EIGVTPEQFR EDTETWRLRV IEYWKLLKPM VQKNSIRNVM DMSSNLGGFA AALNDKDVWV MNVMPVQSSP RMKIIYDRGL
501: IGATHDWCEA FDTYPRTFDL IHAWNTFTET QARGCSFEDL LIEMDRILRP EGFVIIRDTT DNISYIKKYL TLLKWDKWST ETTPKGDPLS TKDEIVLIAR
601: KKLWSLPAIS VS

Arabidopsis Description

Probable methyltransferase PMT9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZV7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.