Factsheet for PGSC0003DMT400047515

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g005490.2.1	Tomato	nucleus, unclear	97.32	97.32
PGSC0003DMT400079286	Potato	cytosol	83.92	83.92
VIT_02s0033g01120.t01	Wine grape	cytosol	81.91	81.5
KRH76381	Soybean	cytosol, golgi, plasma membrane	78.56	78.56
CDY09274	Canola	cytosol, endoplasmic reticulum, golgi	77.55	78.34
CDX76494	Canola	endoplasmic reticulum, golgi	76.21	77.65
KRH39668	Soybean	endoplasmic reticulum	77.55	77.55
GSMUA_Achr4P27550_001	Banana	extracellular, plasma membrane	74.87	77.47
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	77.89	77.37
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	76.88	77.01
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	73.87	76.43
AT4G19120.2	Thale cress	cytosol, endoplasmic reticulum, golgi	76.72	76.33
KRH07206	Soybean	cytosol, golgi, plasma membrane	76.38	76.25
CDY12278	Canola	endoplasmic reticulum, golgi	76.55	76.17
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	76.55	76.17
Os04t0218400-00	Rice	cytosol	18.59	76.03
KRH07708	Soybean	cytosol	76.05	75.92
CDY22567	Canola	endoplasmic reticulum, golgi	76.21	75.83
AT1G31850.3	Thale cress	cytosol, endoplasmic reticulum, golgi	76.55	75.79
CDY47695	Canola	cytosol, endoplasmic reticulum, golgi	76.21	75.46
CDY67792	Canola	cytosol, endoplasmic reticulum, golgi	76.21	75.46
CDY47694	Canola	cytosol, endoplasmic reticulum, golgi	76.05	75.29
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	75.04	74.3
KRH07208	Soybean	cytosol	74.87	74.01
GSMUA_Achr4P18470_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	73.03	72.91
CDY01583	Canola	endoplasmic reticulum, plasma membrane, vacuole	77.72	70.62
CDX98606	Canola	vacuole	77.72	69.88
EER94413	Sorghum	plasma membrane	70.02	68.19
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	68.17	66.94
HORVU1Hr1G051470.3	Barley	endoplasmic reticulum	68.51	66.94
CDY61681	Canola	endoplasmic reticulum, golgi	76.38	66.86
TraesCS1A01G198600.1	Wheat	golgi	68.17	64.81
CDX78919	Canola	cytosol, golgi	76.72	64.78
Bra013374.1-P	Field mustard	cytosol, golgi	76.72	64.78
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	67.84	63.58
GSMUA_Achr5P18010_001	Banana	nucleus	75.21	60.03
PGSC0003DMT400030542	Potato	plastid	46.06	43.17
PGSC0003DMT400071370	Potato	endoplasmic reticulum, golgi	45.23	42.45
PGSC0003DMT400037042	Potato	plastid	45.9	42.35
PGSC0003DMT400014851	Potato	cytosol	44.05	42.15
PGSC0003DMT400080300	Potato	endoplasmic reticulum, golgi	41.71	40.69
PGSC0003DMT400065051	Potato	plastid	44.56	40.67
PGSC0003DMT400071375	Potato	mitochondrion	40.54	40.4
PGSC0003DMT400016774	Potato	endoplasmic reticulum, golgi	41.37	40.36
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	41.37	40.1
PGSC0003DMT400050242	Potato	golgi	40.7	39.45
PGSC0003DMT400059283	Potato	cytosol	33.5	36.04
PGSC0003DMT400017929	Potato	endoplasmic reticulum, golgi	36.18	35.41
PGSC0003DMT400069743	Potato	endoplasmic reticulum, golgi	36.35	35.4
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	36.35	35.11
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	36.35	35.06
PGSC0003DMT400077225	Potato	plastid	35.34	32.81
PGSC0003DMT400069783	Potato	endoplasmic reticulum	36.52	32.15
PGSC0003DMT400027588	Potato	endoplasmic reticulum, plasma membrane, plastid	29.31	30.54
PGSC0003DMT400006139	Potato	nucleus	37.19	27.85
PGSC0003DMT400059933	Potato	golgi	36.85	27.06
PGSC0003DMT400009110	Potato	cytosol	36.35	26.46
PGSC0003DMT400009562	Potato	golgi, mitochondrion	31.49	24.16

Protein Annotations

EntrezGene:102605358	Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0032259	UniProt:M1BKX0	PFAM:PF03141	EnsemblPlantsGene:PGSC0003DMG400018465	PGSC:PGSC0003DMG400018465	EnsemblPlants:PGSC0003DMT400047515
PANTHER:PTHR10108	PANTHER:PTHR10108:SF984	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix
UniParc:UPI000295BB6C	RefSeq:XP_006361241.1	SEG:seg	:	:	:

Description

Methyltransferase PMT20 [Source:PGSC_GENE;Acc:PGSC0003DMG400018465]

Coordinates

chr8:+:3772252..3776822

Molecular Weight (calculated)

68004.4 Da

IEP (calculated)

8.637

GRAVY (calculated)

-0.480

Length

597 amino acids

Sequence
(BLAST)

001: MKHKDGKPHQ SDKSSWKVPV ALTVVVLCGL SFYLGGIFCS ERERYVAEAV NKAVNTPTGT ATVPGQIKAV SFPECSAEYQ DYTPCTDPKR WHKYGRHRLA
101: FLERHCPPSF ERQECLVPPP DGYKSPIRWP KSKNECWYRN VPYDWINKQK SNQHWLKKEG EKFLFPGGGT MFPNGVGAYV DLMQDLIPQM KDGTIRTAID
201: TGCGVASWGG DLLDRGILTV SLAPRDNHQA QVQFALERGI PAILGIISTQ RLPFPSNSFD MAHCSRCLIP WTEFGGVYLL EVHRILRPGG FWVLSGPPVN
301: YQRRWRGWNT TIEEQKSDYD KLQELLTSMC FKLFNKKDDI AVWQKLSDNS CYKKLDNPEN YPSKCDDGTE PDSAWYTPLR PCVVVPNPAA KKVKLEALPK
401: WPERLHAAPE RVSDVRGGNA GSFKHDDGKW KARAKHYKKL LPALGTDKIR NVMDMNTLYG GFAAAVVDDP LWVMNVVSSY APNTLSVVYD RGLIGTIHDW
501: CEAFSTYPRT YDLLHLDGLF SAESHRCEMK YVLLEMDRIL RPNGYAIIRE SSYFVDAIAT MVKGMRWSCR KEETEYGVEK EKILICQKKL WYSKQNS

Best Arabidopsis Sequence Match ( AT1G31850.1 )
(BLAST)

001: MKSGKQSSQP EKGTSRILSL TVLFIAFCGF SFYLGGIFCS ERDKIVAKDV TRTTTKAVAS PKEPTATPIQ IKSVSFPECG SEFQDYTPCT DPKRWKKYGV
101: HRLSFLERHC PPVYEKNECL IPPPDGYKPP IRWPKSREQC WYRNVPYDWI NKQKSNQHWL KKEGDKFHFP GGGTMFPRGV SHYVDLMQDL IPEMKDGTVR
201: TAIDTGCGVA SWGGDLLDRG ILSLSLAPRD NHEAQVQFAL ERGIPAILGI ISTQRLPFPS NAFDMAHCSR CLIPWTEFGG IYLLEIHRIV RPGGFWVLSG
301: PPVNYNRRWR GWNTTMEDQK SDYNKLQSLL TSMCFKKYAQ KDDIAVWQKL SDKSCYDKIA KNMEAYPPKC DDSIEPDSAW YTPLRPCVVA PTPKVKKSGL
401: GSIPKWPERL HVAPERIGDV HGGSANSLKH DDGKWKNRVK HYKKVLPALG TDKIRNVMDM NTVYGGFSAA LIEDPIWVMN VVSSYSANSL PVVFDRGLIG
501: TYHDWCEAFS TYPRTYDLLH LDSLFTLESH RCEMKYILLE MDRILRPSGY VIIRESSYFM DAITTLAKGI RWSCRREETE YAVKSEKILV CQKKLWFSSN
601: QTS

Arabidopsis Description

Probable methyltransferase PMT20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S7]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.