Factsheet for TraesCS1D01G202300.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G051470.3	Barley	endoplasmic reticulum	97.7	97.22
TraesCS1A01G198600.1	Wheat	golgi	99.01	95.86
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	98.85	94.35
Os04t0218400-00	Rice	cytosol	20.23	84.25
EER94413	Sorghum	plasma membrane	78.62	77.98
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	70.39	74.18
GSMUA_Achr4P27550_001	Banana	extracellular, plasma membrane	70.23	74.0
KRH76381	Soybean	cytosol, golgi, plasma membrane	67.11	68.34
GSMUA_Achr4P18470_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	67.11	68.23
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	66.94	68.17
Solyc08g075870.2.1	Tomato	nucleus, unclear	66.61	67.84
VIT_02s0033g01120.t01	Wine grape	cytosol	66.78	67.67
Solyc08g005490.2.1	Tomato	nucleus, unclear	66.28	67.5
PGSC0003DMT400079286	Potato	cytosol	66.28	67.5
CDY09274	Canola	cytosol, endoplasmic reticulum, golgi	65.46	67.34
CDX76494	Canola	endoplasmic reticulum, golgi	64.8	67.24
KRH07206	Soybean	cytosol, golgi, plasma membrane	65.95	67.06
AT4G19120.2	Thale cress	cytosol, endoplasmic reticulum, golgi	65.79	66.67
KRH07708	Soybean	cytosol	65.46	66.56
KRH39668	Soybean	endoplasmic reticulum	65.3	66.5
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	65.62	66.39
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	64.97	66.28
CDY12278	Canola	endoplasmic reticulum, golgi	65.3	66.17
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	65.3	66.17
CDY22567	Canola	endoplasmic reticulum, golgi	64.64	65.5
CDY67792	Canola	cytosol, endoplasmic reticulum, golgi	64.8	65.34
CDY47695	Canola	cytosol, endoplasmic reticulum, golgi	64.8	65.34
CDY47694	Canola	cytosol, endoplasmic reticulum, golgi	64.8	65.34
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	63.98	64.51
AT1G31850.3	Thale cress	cytosol, endoplasmic reticulum, golgi	63.98	64.51
KRH07208	Soybean	cytosol	62.66	63.08
CDY01583	Canola	endoplasmic reticulum, plasma membrane, vacuole	65.79	60.88
CDX98606	Canola	vacuole	65.79	60.24
CDY61681	Canola	endoplasmic reticulum, golgi	65.62	58.5
GSMUA_Achr5P18010_001	Banana	nucleus	70.23	57.09
CDX78919	Canola	cytosol, golgi	66.12	56.86
Bra013374.1-P	Field mustard	cytosol, golgi	65.95	56.72
TraesCS2D01G397900.1	Wheat	mitochondrion	45.72	43.57
TraesCS6D01G237200.1	Wheat	golgi	45.89	43.39
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	43.42	43.0
TraesCS6D01G025000.1	Wheat	cytosol	43.91	42.31
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	41.78	42.05
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	41.78	41.5
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	42.93	41.49
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	39.31	41.28
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	40.46	39.81
TraesCS7D01G433000.1	Wheat	plastid	37.17	36.87
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	36.84	36.78
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	35.2	34.74
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	33.06	33.5
TraesCS2D01G569900.1	Wheat	plastid	36.35	31.44
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	35.69	31.09
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	33.22	30.28
TraesCS3D01G401300.2	Wheat	golgi	38.49	29.14
TraesCS3D01G342700.1	Wheat	golgi	33.22	28.21
TraesCS5D01G418500.1	Wheat	mitochondrion	30.43	25.59
TraesCS7D01G380100.1	Wheat	mitochondrion	36.02	23.99
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	34.87	23.74
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	35.2	21.04
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	5.43	11.07

Protein Annotations

EnsemblPlants:TraesCS1D01G202300.2	EnsemblPlantsGene:TraesCS1D01G202300	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF984	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr1D:+:285441920..285443907

Molecular Weight (calculated)

67602.1 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.334

Length

608 amino acids

Sequence
(BLAST)

001: MKYSKEAKPE RAGGGGAGAR AVPVALMLLL LCGFSFYLGG IYSTGRTFTF SSTTTSIIPI VSTAKQEGSA IALAIARNGN GDDEVEFSEC PADYQDYTPC
101: TDPKRWRRYG NYRLSFMERH CPPPPERAVC LVPPPRGYKP PIRWPKSKDQ CWYRNVPYDW INSQKSNQHW LRKDGDRFTF PGGGTMFPNG VGAYVDLMAD
201: LIPGMKDGSV RTALDTGCGV ASWGGDLLAR NILTVSLAPR DNHEAQVQFA LERGIPAILG IISTQRLPIP SASMDMAHCS RCLIPWTEFG GLYLMEIQRV
301: LRPGGFWVLS GPPINYENRW HGWNTTVEAQ KADFDRLKKM LASMCFRLYN KKGDIAVWQK SLDAGCYDKL TPVTTPAKCD DSVDADAAWY VPMRSCVTAP
401: SPKSRGKALP KWPQRLGVAP ERVSVVPGGS GSTMKHDDGK WKAAVKHYKA LLPALGSDKV RNVMDMSTVY GGFAASLVKD PVWVMNVVSS YGPNSLGVVY
501: DRGLIGTNHD WCEAFSTYPR TYDLLHADGL FAAESHRCEM KFVLVEMDRI LRPTGYAIIR DNPYFLDSVA SIAKGMRWTC DRHDTENKEN EKEKLLICHK
601: QLWSAKKA

Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)

001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN

Arabidopsis Description

ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.