Factsheet for TraesCS3D01G389400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
cytosol 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	96.06	95.59
TraesCS3B01G427600.1	Wheat	cytosol	58.95	93.98
HORVU3Hr1G089210.3	Barley	vacuole	92.61	91.56
OQU88046	Sorghum	plastid	72.41	71.13
Zm00001d042499_P001	Maize	plastid	69.79	67.25
GSMUA_Achr5P25650_001	Banana	cytosol	37.44	59.07
CDX83493	Canola	golgi	34.98	51.45
CDY57187	Canola	cytosol	25.94	50.64
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	48.11	47.64
KRH01812	Soybean	extracellular, plasma membrane, vacuole	44.83	47.48
Bra000296.1-P	Field mustard	plastid	42.69	47.36
AT2G43200.2	Thale cress	endoplasmic reticulum, golgi	44.01	43.86
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	43.68	43.32
KRH46879	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	44.34	42.86
CDY68187	Canola	mitochondrion	43.19	42.63
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	42.53	42.32
TraesCS2D01G397900.1	Wheat	mitochondrion	43.68	41.69
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	42.04	41.42
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	40.39	40.73
TraesCS6D01G025000.1	Wheat	cytosol	41.87	40.41
TraesCS6D01G237200.1	Wheat	golgi	42.53	40.28
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	40.89	39.59
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	36.29	38.17
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	36.78	36.84
TraesCS7D01G433000.1	Wheat	plastid	34.81	34.58
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	34.48	34.09
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	30.05	30.5
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	33.83	29.51
TraesCS2D01G569900.1	Wheat	plastid	33.83	29.3
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	31.86	29.09
TraesCS3D01G342700.1	Wheat	golgi	31.53	26.82
TraesCS3D01G401300.2	Wheat	golgi	34.48	26.15
TraesCS5D01G418500.1	Wheat	mitochondrion	30.87	26.0
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	32.68	22.28
TraesCS7D01G380100.1	Wheat	mitochondrion	32.02	21.36
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	33.5	20.06

Protein Annotations

EnsemblPlants:TraesCS3D01G389400.1	EnsemblPlantsGene:TraesCS3D01G389400	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF968	PFAM:PF03141	PRINTS:PR01217	SEG:seg	SUPFAM:SSF101447	SUPFAM:SSF53335
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:504973962..504977696

Molecular Weight (calculated)

66885.1 Da

IEP (calculated)

7.146

GRAVY (calculated)

-0.353

Length

609 amino acids

Sequence
(BLAST)

001: MPLPAPAVDA VIKPLPRALS LAGAAAAAAA TSLLLISAVV SRARDDYASP PPSTSASTTA ALPPAPEPSP QHHEHPHPPP PPVPPCPPNA SHHTPCHEPP
101: SGERHCPPHP PPPHPPHPPE DPPPHPPPPP PHCRVPPPPG YHPPPPWPAR RERARYANVD LPALTVAKLA ASQDPVHARG EWLVFPKGAG NYVEQLERVV
201: PLRGGAVRTA LDIGCGVASF GDYLLSYGVL TMSIAPRERH GADVQFALER GLPAMIGALG ARRLPYPSRS FDMVHCADCH VSWTAHDGLY MLEIDRLLRP
301: GGYWVMSSPP ISWKSPYKGP NKTIENLDGE QLAMEDTANK LCWEKVSDKG TLSVWRKPIN HLHCAQEAEF LRSPPLCTED DPDTAWYVNI SMCRTHLPRV
401: ELDGGPLEKW PQRLATVPPR IANGEIKGMS IQAYKHDCSV WRRRVELYGT YLKDLSHRSY RNVMDMNAGF GSFAAAMLKY PVWVMNVVPA NITDNNTLGI
501: IYERGLIGTY MDWCEAFSTY PRTYDLIHAN GVFSLYINKC GTLDILVEMD RILRPGGATI IRDAADVVLK VKEAADRLQW RSRVVNTDDE GPDPQKLLIV
601: DNSLQLPGS

Best Arabidopsis Sequence Match ( AT1G33170.1 )
(BLAST)

001: MAKENSSHSL AEAKRKRLTW ILCVSGLCIL SYVLGSWQTN TVPTSSSEAY SRMGCDETST TTRAQTTQTQ TNPSSDDTSS SLSSSEPVEL DFESHHKLEL
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS

Arabidopsis Description

Probable methyltransferase PMT18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C884]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.