Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G389400.1 | Wheat | endoplasmic reticulum | 95.59 | 96.06 |
| TraesCS3B01G427600.1 | Wheat | cytosol | 58.99 | 94.5 |
| HORVU3Hr1G089210.3 | Barley | vacuole | 93.46 | 92.86 |
| OQU88046 | Sorghum | plastid | 72.71 | 71.77 |
| Zm00001d042499_P001 | Maize | plastid | 69.77 | 67.56 |
| GSMUA_Achr5P25650_001 | Banana | cytosol | 38.24 | 60.62 |
| CDX83493 | Canola | golgi | 34.97 | 51.69 |
| CDY57187 | Canola | cytosol | 25.98 | 50.96 |
| KRH01812 | Soybean | extracellular, plasma membrane, vacuole | 44.93 | 47.83 |
| Bra000296.1-P | Field mustard | plastid | 42.81 | 47.72 |
| VIT_05s0124g00530.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion, vacuole | 47.88 | 47.64 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 44.12 | 44.19 |
| TraesCS5A01G226900.1 | Wheat | golgi | 43.63 | 43.49 |
| KRH46879 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 44.44 | 43.17 |
| CDY68187 | Canola | mitochondrion | 43.14 | 42.79 |
| TraesCS2A01G400300.1 | Wheat | mitochondrion | 43.63 | 42.11 |
| TraesCS6A01G021300.1 | Wheat | cytosol | 42.81 | 41.52 |
| TraesCS5A01G421600.2 | Wheat | endoplasmic reticulum | 41.99 | 41.38 |
| TraesCS6A01G256000.1 | Wheat | mitochondrion | 42.65 | 40.72 |
| TraesCS1A01G213400.1 | Wheat | endoplasmic reticulum, golgi | 40.03 | 40.56 |
| TraesCS3A01G475800.1 | Wheat | cytosol | 33.01 | 40.24 |
| TraesCS4A01G458400.1 | Wheat | endoplasmic reticulum, golgi | 41.01 | 39.9 |
| TraesCS7A01G031100.1 | Wheat | endoplasmic reticulum, golgi | 40.85 | 39.75 |
| TraesCS4A01G163200.1 | Wheat | endoplasmic reticulum | 40.85 | 39.68 |
| TraesCS2A01G400900.1 | Wheat | golgi, mitochondrion | 36.44 | 38.72 |
| TraesCS1A01G198600.1 | Wheat | golgi | 36.93 | 35.99 |
| TraesCS7A01G444200.1 | Wheat | plastid | 34.97 | 35.2 |
| TraesCS1A01G154400.2 | Wheat | golgi | 33.99 | 33.07 |
| TraesCS1A01G233500.1 | Wheat | endoplasmic reticulum, plasma membrane | 29.74 | 30.33 |
| TraesCS3A01G362600.1 | Wheat | golgi | 34.31 | 29.91 |
| TraesCS1A01G297000.1 | Wheat | golgi | 31.86 | 29.32 |
| TraesCS2A01G560300.1 | Wheat | mitochondrion, peroxisome, plastid | 33.66 | 27.84 |
| TraesCS3A01G348800.1 | Wheat | golgi | 31.7 | 27.36 |
| TraesCS5A01G408700.1 | Wheat | mitochondrion | 30.72 | 26.26 |
| TraesCS3A01G406100.1 | Wheat | plastid | 34.31 | 25.99 |
| TraesCS4A01G220000.1 | Wheat | golgi | 32.03 | 21.92 |
| TraesCS7A01G383700.2 | Wheat | plastid | 30.72 | 20.5 |
| TraesCS5A01G114100.1 | Wheat | endoplasmic reticulum | 33.66 | 19.83 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G395800.1 | EnsemblPlantsGene:TraesCS3A01G395800 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | PANTHER:PTHR10108 |
| PANTHER:PTHR10108:SF968 | PFAM:PF03141 | PRINTS:PR01217 | SEG:seg | SUPFAM:SSF101447 | SUPFAM:SSF53335 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:642955107..642959020
Molecular Weight (calculated)
67225.8 Da
IEP (calculated)
7.632
GRAVY (calculated)
-0.323
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLPAPAVDA VIKPLPRALS LAGAAAAAAA TSLLLISAVV SRARDDYASP PPSTSASTTA ALPPAPEPSP QHHEHPHPPP PPVPPCPPNA SHHTPCHEPP
101: SGERHCPPHP PPPHPPHPPE DPPPHPPPPP PHCRVPPPPG YHPPPPWPAR RERARFANAD LPPLTAAKLA ASQDPVHARG EWLVFPKGAG NYVEQLERVV
201: PLRGGAVRTA LDIGCGVASF GDYLLSYGVL TMSIAPRERH GAHVQFALER GLPAMIGVLG ARRLPYPSRS FDMVHCADCH VSWTAHDGLY MLEIDRLLRP
301: GGYWVMSRPP ISWKSPYKGP NKTIENLDGQ QLAMEDTANK LCWEKVSDKG TVSVWRKPIN HLHCAQEAEF LRSPPLCTED DPDSAWYVNI SMCRTRLPRV
401: ELVGDIAGGP VEKWPQRLAA VPPRIANREI KGMSIQAYKH DFSIWKRRVE LYGTYLKDLS HRSYRNVMDM NAGFGSFAAA MLKYPVWVMN VVPANITDNT
501: LGIIYERGLI GTYMDWCEAF STYPRTYDLI HANGVFSLYI DKCGILDILV EMDRILRPGG AAIIRDAADV VLKVKEAADR LQWRSRVVNT EDEGPDPQKL
601: LIVDNSLPLP GS
101: SGERHCPPHP PPPHPPHPPE DPPPHPPPPP PHCRVPPPPG YHPPPPWPAR RERARFANAD LPPLTAAKLA ASQDPVHARG EWLVFPKGAG NYVEQLERVV
201: PLRGGAVRTA LDIGCGVASF GDYLLSYGVL TMSIAPRERH GAHVQFALER GLPAMIGVLG ARRLPYPSRS FDMVHCADCH VSWTAHDGLY MLEIDRLLRP
301: GGYWVMSRPP ISWKSPYKGP NKTIENLDGQ QLAMEDTANK LCWEKVSDKG TVSVWRKPIN HLHCAQEAEF LRSPPLCTED DPDSAWYVNI SMCRTRLPRV
401: ELVGDIAGGP VEKWPQRLAA VPPRIANREI KGMSIQAYKH DFSIWKRRVE LYGTYLKDLS HRSYRNVMDM NAGFGSFAAA MLKYPVWVMN VVPANITDNT
501: LGIIYERGLI GTYMDWCEAF STYPRTYDLI HANGVFSLYI DKCGILDILV EMDRILRPGG AAIIRDAADV VLKVKEAADR LQWRSRVVNT EDEGPDPQKL
601: LIVDNSLPLP GS
001: MAKENSSHSL AEAKRKRLTW ILCVSGLCIL SYVLGSWQTN TVPTSSSEAY SRMGCDETST TTRAQTTQTQ TNPSSDDTSS SLSSSEPVEL DFESHHKLEL
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS
Arabidopsis Description
Probable methyltransferase PMT18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C884]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.