Factsheet for VIT_05s0124g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, vacuole

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25650_001	Banana	cytosol	42.6	67.88
Bra000296.1-P	Field mustard	plastid	55.77	62.48
KRH01812	Soybean	extracellular, plasma membrane, vacuole	57.89	61.91
CDX83493	Canola	golgi	41.63	61.84
CDY57187	Canola	cytosol	30.41	59.94
AT2G43200.2	Thale cress	endoplasmic reticulum, golgi	56.75	57.12
TraesCS3B01G427600.1	Wheat	cytosol	35.45	57.07
KRH46879	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	58.05	56.67
CDY68187	Canola	mitochondrion	55.28	55.11
VIT_02s0025g03200.t01	Wine grape	cytosol	52.03	50.63
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	49.11	49.43
VIT_17s0000g06050.t01	Wine grape	cytosol	48.78	49.18
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	47.64	48.11
VIT_15s0048g01940.t01	Wine grape	mitochondrion	49.27	47.94
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	47.64	47.88
VIT_01s0026g02340.t01	Wine grape	golgi	49.11	47.48
HORVU3Hr1G089210.3	Barley	vacuole	47.32	47.24
VIT_16s0100g00570.t01	Wine grape	mitochondrion	50.08	46.95
OQU88046	Sorghum	plastid	45.85	45.48
Zm00001d042499_P001	Maize	plastid	44.72	43.51
VIT_02s0033g01120.t01	Wine grape	cytosol	40.81	41.83
VIT_04s0023g02790.t01	Wine grape	cytosol	33.5	40.71
VIT_15s0048g01990.t01	Wine grape	mitochondrion	38.05	39.2
VIT_05s0049g01180.t01	Wine grape	endoplasmic reticulum, golgi	37.72	37.91
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	36.42	36.96
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	37.24	36.94
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	34.15	34.94
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	37.07	34.23
VIT_13s0019g02250.t01	Wine grape	golgi	37.72	33.82
VIT_04s0044g01670.t01	Wine grape	cytosol	35.77	26.67
VIT_18s0001g12470.t01	Wine grape	mitochondrion	31.22	26.52
VIT_18s0001g01270.t01	Wine grape	plasma membrane	36.75	25.74

Protein Annotations

EntrezGene:104879421	Gene3D:3.40.50.150	MapMan:35.1	EMBL:AM423942	ProteinID:CAN62352	ProteinID:CAN62352.1
ProteinID:CCB61602	ProteinID:CCB61602.1	ncoils:Coil	UniProt:F6I3T4	EMBL:FN596743	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0032259	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF968	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI00015CCD1F	ArrayExpress:VIT_05s0124g00530	EnsemblPlantsGene:VIT_05s0124g00530	EnsemblPlants:VIT_05s0124g00530.t01
unigene:Vvi.19811	RefSeq:XP_010650488.1	RefSeq:XP_010650489.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:-:21118536..21124131

Molecular Weight (calculated)

69916.5 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.288

Length

615 amino acids

Sequence
(BLAST)

001: MATQQHPPPT PNLLRRPLIK VFFVAIVFCA CYFLGSYSNP SSTLSTIQAH PQHCFPSNAS TPKHPSPSLV LDFEAHHILP LPQESSQSGG FFELCPSNFT
101: HYCPCQDPSR AKEFNVTKFF HRERHCPGSH QALRCLVPRP KGYRRPFPWP KSRDYAWFNN VPFPKLSVYK KSQNWVRVEG DRLVFPGGGT SFPKGVKDYV
201: DEIRRVVPLK SGNIRTALDV GCGVASFGAS LMDYNILTMS IAPMDIHEAQ VQFALERGLP AMLGILSTYR LPYPSRSFDM AHCSRCLVPW TAYDGVYLME
301: IDRVLRPGGY WVVSGPPISW KSSYKGWERK AQDLEKEQIS LEDLARRLCW KKIAERGPIA VWRKPTNHIH CIQKLKAWKS PHFCAETDPD AGWYKEMDPC
401: ITPLPKVTDI RSISGGALER WPKMLNTAPP RIRNGVTRGA TVNTFNKDNQ IWIKRVSYYG SVLKSLGAGK YRNIMDMNAG LGGFAAAISK QQVWVMNVVP
501: FDAQNNTLGI VYERGLIGTY MNWCEAFSTY PRTYDLIHAH GVFSMYMGKC DILDILFEMY RILRPEGAAI IRDHIDIIVK VKGITDRMRW KSKILHSEYG
601: PFHPEKILFV DNSEA

Best Arabidopsis Sequence Match ( AT2G43200.1 )
(BLAST)

001: MNPSQQHLPK LCPKRLFLFF TPFLLFSLYY ILTTIKTITI SSQDRHHPPQ LHVPSISHYY SLPETSENRS SPPPLLLPPP PSSSSSLSSY FPLCPKNFTN
101: YLPCHDPSTA RQYSIERHYR RERHCPDIAQ EKFRCLVPKP TGYKTPFPWP ESRKYAWFRN VPFKRLAELK KTQNWVRLEG DRFVFPGGGT SFPGGVKDYV
201: DVILSVLPLA SGSIRTVLDI GCGVASFGAF LLNYKILTMS IAPRDIHEAQ VQFALERGLP AMLGVLSTYK LPYPSRSFDM VHCSRCLVNW TSYDGLYLME
301: VDRVLRPEGY WVLSGPPVAS RVKFKNQKRD SKELQNQMEK LNDVFRRLCW EKIAESYPVV IWRKPSNHLQ CRKRLKALKF PGLCSSSDPD AAWYKEMEPC
401: ITPLPDVNDT NKTVLKNWPE RLNHVPRMKT GSIQGTTIAG FKADTNLWQR RVLYYDTKFK FLSNGKYRNV IDMNAGLGGF AAALIKYPMW VMNVVPFDLK
501: PNTLGVVYDR GLIGTYMNWC EALSTYPRTY DLIHANGVFS LYLDKCDIVD ILLEMQRILR PEGAVIIRDR FDVLVKVKAI TNQMRWNGTM YPEDNSVFDH
601: GTILIVDNSI K

Arabidopsis Description

Probable methyltransferase PMT19 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW75]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.