Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 4
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05816 | Soybean | endoplasmic reticulum | 65.75 | 68.1 |
| KRH15210 | Soybean | mitochondrion | 66.85 | 68.07 |
| CDY26666 | Canola | mitochondrion | 62.71 | 63.32 |
| AT1G19430.1 | Thale cress | mitochondrion | 62.85 | 62.85 |
| Bra025737.1-P | Field mustard | mitochondrion | 62.43 | 62.78 |
| CDY67390 | Canola | mitochondrion | 62.29 | 62.64 |
| PGSC0003DMT400009562 | Potato | golgi, mitochondrion | 64.09 | 59.64 |
| Solyc04g080360.2.1 | Tomato | nucleus | 63.4 | 59.0 |
| GSMUA_Achr6P05660_001 | Banana | mitochondrion | 55.8 | 57.96 |
| HORVU5Hr1G099090.3 | Barley | mitochondrion | 51.93 | 52.51 |
| TraesCS5D01G418500.1 | Wheat | mitochondrion | 52.21 | 52.28 |
| TraesCS5B01G413400.3 | Wheat | mitochondrion | 51.8 | 51.94 |
| TraesCS5A01G408700.1 | Wheat | mitochondrion | 51.24 | 51.82 |
| Os03t0775200-01 | Rice | mitochondrion | 51.8 | 51.44 |
| VIT_04s0023g02790.t01 | Wine grape | cytosol | 35.5 | 50.79 |
| Zm00001d034250_P002 | Maize | mitochondrion | 50.41 | 49.93 |
| VIT_13s0067g01690.t01 | Wine grape | endoplasmic reticulum, golgi | 33.84 | 40.43 |
| VIT_04s0044g01670.t01 | Wine grape | cytosol | 43.78 | 38.42 |
| VIT_18s0001g01270.t01 | Wine grape | plasma membrane | 40.88 | 33.71 |
| VIT_13s0019g02250.t01 | Wine grape | golgi | 31.77 | 33.53 |
| VIT_05s0049g01180.t01 | Wine grape | endoplasmic reticulum, golgi | 28.18 | 33.33 |
| VIT_18s0001g01600.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 30.66 | 33.33 |
| VIT_07s0005g03630.t01 | Wine grape | endoplasmic reticulum, golgi | 28.18 | 32.9 |
| VIT_17s0000g06050.t01 | Wine grape | cytosol | 26.52 | 31.48 |
| VIT_02s0012g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 26.38 | 31.26 |
| VIT_05s0124g00530.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion, vacuole | 26.52 | 31.22 |
| VIT_15s0048g01990.t01 | Wine grape | mitochondrion | 25.69 | 31.16 |
| VIT_02s0033g01120.t01 | Wine grape | cytosol | 25.41 | 30.67 |
| VIT_01s0026g02340.t01 | Wine grape | golgi | 26.52 | 30.19 |
| VIT_08s0007g05750.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 25.0 | 30.12 |
| VIT_02s0025g03200.t01 | Wine grape | cytosol | 25.97 | 29.75 |
| VIT_15s0048g01940.t01 | Wine grape | mitochondrion | 25.83 | 29.59 |
| VIT_16s0100g00570.t01 | Wine grape | mitochondrion | 26.8 | 29.57 |
| EER93372 | Sorghum | mitochondrion | 50.55 | 27.94 |
Protein Annotations
| EntrezGene:100260939 | wikigene:100260939 | EntrezGene:109121680 | Gene3D:3.40.50.150 | MapMan:35.1 | ProteinID:CBI19694 |
| ProteinID:CBI19694.3 | UniProt:E0CQC6 | EMBL:FN595227 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0010181 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0032259 | GO:GO:0051536 | GO:GO:0055114 | EntrezGene:LOC100260939 | wikigene:LOC100260939 |
| PFAM:PF03141 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF733 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| TMHMM:TMhelix | UniParc:UPI00015C7E4E | ArrayExpress:VIT_18s0001g12470 | EnsemblPlantsGene:VIT_18s0001g12470 | EnsemblPlants:VIT_18s0001g12470.t01 | unigene:Vvi.11544 |
| RefSeq:XP_002281457 | RefSeq:XP_002281457.1 | RefSeq:XP_019072114.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:-:10663515..10668547
Molecular Weight (calculated)
81296.6 Da
IEP (calculated)
5.593
GRAVY (calculated)
-0.511
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: MALARFGRQA KRPYGVCVKM TAVAVLGMCF IFVWSMFSAS PSAVTSQRSS FGDINEPVPG STGVGSSRTG LKKNEPEKTE LSGGRNKVKF ESDLEEKDEK
101: KLDGSVTLAA NGNNSTNIDK KEEANEGKEG IDKQNHGSEG SENKESEKEK EEGEVGGDDK EEAVDREGEA NEDVDADGDW AVTVEEEPVG KVEEESGGSK
201: STGKKKKRNG PLFDLKAQYT WKLCSTRSKH NYIPCIDNES GTGRLQSYRH RERSCPRTPP MCLIPLPAKG YSSPVPWPES KLKVLYKNVA HPKLAAFIKT
301: HSWVVESGEY LMFPQNQSEF KGGVFHYLES LEEMVPDIEW GKNIRVVLDI GCTDVSFGAF LLDKEVLTLS LGLKDDLVDL AQVALERGFP AVVSPFGTRR
401: LPFPSGVFDA IHCGGCNIAW HSNGGKLLLE MNRILRPGGY FILSSKHDNI EDEEEMTSLT ASICWNVLAH KTDEISEVGV KIYQKPESND IYELRRKKNP
501: PICKEDEKPD AAWYVPMKTC LHTIPAAIEE RGTEWPEEWP KRLDTFPDWL ENRDKLIADS EHWKAIVSKS YLTGMGIDWS NVHNILDMKS IYGGFAAALS
601: DQKVWVMNVV PVHAPDTLPI IYERGLVGIY HDWCESFGTY PRSYDLLHAD HMFSRLKNRC KQPVAIVVEM DRILRPGGWA IIRDKVEILD PLEGILRSMH
701: WEIRMTFAQD KEGIMCAQKT LWRP
101: KLDGSVTLAA NGNNSTNIDK KEEANEGKEG IDKQNHGSEG SENKESEKEK EEGEVGGDDK EEAVDREGEA NEDVDADGDW AVTVEEEPVG KVEEESGGSK
201: STGKKKKRNG PLFDLKAQYT WKLCSTRSKH NYIPCIDNES GTGRLQSYRH RERSCPRTPP MCLIPLPAKG YSSPVPWPES KLKVLYKNVA HPKLAAFIKT
301: HSWVVESGEY LMFPQNQSEF KGGVFHYLES LEEMVPDIEW GKNIRVVLDI GCTDVSFGAF LLDKEVLTLS LGLKDDLVDL AQVALERGFP AVVSPFGTRR
401: LPFPSGVFDA IHCGGCNIAW HSNGGKLLLE MNRILRPGGY FILSSKHDNI EDEEEMTSLT ASICWNVLAH KTDEISEVGV KIYQKPESND IYELRRKKNP
501: PICKEDEKPD AAWYVPMKTC LHTIPAAIEE RGTEWPEEWP KRLDTFPDWL ENRDKLIADS EHWKAIVSKS YLTGMGIDWS NVHNILDMKS IYGGFAAALS
601: DQKVWVMNVV PVHAPDTLPI IYERGLVGIY HDWCESFGTY PRSYDLLHAD HMFSRLKNRC KQPVAIVVEM DRILRPGGWA IIRDKVEILD PLEGILRSMH
701: WEIRMTFAQD KEGIMCAQKT LWRP
001: MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP
Arabidopsis Description
Probable methyltransferase PMT28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.