Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50730 | Canola | cytosol | 63.52 | 81.45 |
| KRG99086 | Soybean | endoplasmic reticulum | 77.83 | 81.41 |
| KRH45909 | Soybean | endoplasmic reticulum | 77.36 | 80.92 |
| VIT_17s0000g06050.t01 | Wine grape | cytosol | 77.36 | 80.66 |
| KRH74853 | Soybean | endoplasmic reticulum, golgi | 76.89 | 80.56 |
| KRH70718 | Soybean | endoplasmic reticulum | 76.57 | 80.23 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 76.73 | 79.22 |
| CDY16198 | Canola | endoplasmic reticulum, golgi | 75.47 | 79.21 |
| Bra024678.1-P | Field mustard | endoplasmic reticulum, golgi | 76.26 | 78.99 |
| CDY40268 | Canola | endoplasmic reticulum, golgi | 75.0 | 78.71 |
| PGSC0003DMT400016774 | Potato | endoplasmic reticulum, golgi | 75.47 | 78.43 |
| Bra012437.1-P | Field mustard | endoplasmic reticulum, golgi | 75.63 | 78.34 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 75.79 | 78.12 |
| CDY46435 | Canola | endoplasmic reticulum, golgi | 73.9 | 77.94 |
| CDY45006 | Canola | endoplasmic reticulum, golgi | 73.9 | 77.69 |
| Bra016293.1-P | Field mustard | endoplasmic reticulum, golgi | 74.53 | 77.58 |
| GSMUA_Achr3P01520_001 | Banana | endoplasmic reticulum, golgi | 71.7 | 77.29 |
| Solyc05g007490.2.1 | Tomato | nucleus, plastid, unclear | 74.37 | 77.29 |
| Solyc01g010870.2.1 | Tomato | nucleus, unclear | 73.74 | 77.27 |
| PGSC0003DMT400080300 | Potato | endoplasmic reticulum, golgi | 74.06 | 76.96 |
| GSMUA_Achr3P20050_001 | Banana | endoplasmic reticulum, golgi | 69.97 | 75.42 |
| TraesCS5D01G234300.1 | Wheat | endoplasmic reticulum, golgi | 71.54 | 74.1 |
| VIT_02s0012g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 71.07 | 73.98 |
| TraesCS5B01G225500.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 71.38 | 73.94 |
| TraesCS5A01G226900.1 | Wheat | golgi | 71.07 | 73.62 |
| HORVU5Hr1G065680.2 | Barley | cytosol, endoplasmic reticulum, golgi | 70.91 | 73.45 |
| GSMUA_Achr8P16940_001 | Banana | endoplasmic reticulum, golgi | 41.2 | 73.39 |
| Os09t0415700-01 | Rice | golgi | 70.44 | 72.73 |
| EER96732 | Sorghum | endoplasmic reticulum, golgi | 70.6 | 72.65 |
| Zm00001d020461_P001 | Maize | plasma membrane | 70.13 | 72.52 |
| HORVU5Hr1G102720.2 | Barley | cytosol | 58.02 | 72.21 |
| EER94782 | Sorghum | endoplasmic reticulum, golgi, vacuole | 66.67 | 69.51 |
| Os03t0379100-01 | Rice | endoplasmic reticulum, golgi, vacuole | 66.35 | 69.07 |
| TraesCS5D01G429900.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.35 | 68.95 |
| TraesCS5A01G421600.2 | Wheat | endoplasmic reticulum | 66.51 | 68.12 |
| TraesCS5B01G423200.2 | Wheat | cytosol, endoplasmic reticulum, golgi, mitochondrion | 66.35 | 67.95 |
| Zm00001d029336_P002 | Maize | cytosol | 66.98 | 62.01 |
| Zm00001d047183_P002 | Maize | golgi | 57.7 | 58.81 |
| VIT_02s0025g03200.t01 | Wine grape | cytosol | 54.25 | 54.59 |
| VIT_16s0100g00570.t01 | Wine grape | mitochondrion | 54.09 | 52.44 |
| VIT_15s0048g01940.t01 | Wine grape | mitochondrion | 50.79 | 51.11 |
| VIT_05s0124g00530.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion, vacuole | 47.48 | 49.11 |
| VIT_02s0033g01120.t01 | Wine grape | cytosol | 40.25 | 42.67 |
| VIT_04s0023g02790.t01 | Wine grape | cytosol | 32.39 | 40.71 |
| VIT_15s0048g01990.t01 | Wine grape | mitochondrion | 37.74 | 40.2 |
| VIT_05s0049g01180.t01 | Wine grape | endoplasmic reticulum, golgi | 36.16 | 37.58 |
| VIT_07s0005g03630.t01 | Wine grape | endoplasmic reticulum, golgi | 35.22 | 36.13 |
| VIT_18s0001g01600.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 36.79 | 35.14 |
| VIT_08s0007g05750.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 32.86 | 34.78 |
| VIT_13s0019g02250.t01 | Wine grape | golgi | 36.64 | 33.97 |
| VIT_13s0067g01690.t01 | Wine grape | endoplasmic reticulum, golgi | 32.23 | 33.83 |
| VIT_04s0044g01670.t01 | Wine grape | cytosol | 35.22 | 27.15 |
| VIT_18s0001g12470.t01 | Wine grape | mitochondrion | 30.19 | 26.52 |
| VIT_18s0001g01270.t01 | Wine grape | plasma membrane | 36.32 | 26.31 |
Protein Annotations
| EntrezGene:100258541 | wikigene:100258541 | Gene3D:3.40.50.150 | MapMan:35.1 | ProteinID:CCB56552 | ProteinID:CCB56552.1 |
| UniProt:F6HPC4 | EMBL:FN596002 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | EntrezGene:LOC100258541 | wikigene:LOC100258541 |
| PFAM:PF03141 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1061 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| TIGR:TC62843 | TMHMM:TMhelix | UniParc:UPI0002108B21 | ArrayExpress:VIT_01s0026g02340 | EnsemblPlantsGene:VIT_01s0026g02340 | EnsemblPlants:VIT_01s0026g02340.t01 |
| unigene:Vvi.14142 | RefSeq:XP_002273644 | RefSeq:XP_002273644.1 | : | : | : |
Description
No Description!
Coordinates
chr1:-:11821377..11826136
Molecular Weight (calculated)
71776.0 Da
IEP (calculated)
7.234
GRAVY (calculated)
-0.323
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKRGIGLRL EVLYEMFIMA TKIISADSRT RSSISIFIVV GLCCFFYILG AWQRSGFGKG DSIAVEMTKS GADCSIISNL NFETHHGGEP VTTDDSESKP
101: KVFKPCRSKY IDYTPCQHQK RAMTFPRENM VYRERHCPAE NEKLHCLIPA PEGYVTPFPW PKSRDYVPYA NAPYKSLTVE KAVQNWIQYE GNVFRFPGGG
201: TQFPQGADAY INQLASVIPI DNGTVRTALD TGCGVASWGA YLLKKNVIAM SFAPRDNHEA QVQFALERGV PAVIGVLGTI KLPYPSRAFD MAHCSRCLIP
301: WGANDGIYMM EVDRVLRPGG YWVLSGPPIN WRNNYKAWLR PKEELQEEQR KIEDIARLLC WEKKYEQGEI AIWQKRVNAG ACSGRQDDAR TTFCKAEETD
401: DTWYKNMEPC ISPYPDVNSP EEVSGGELQP FPKRLYAVPP RVASGSIPGV SVETYLEDNK LWKKHLNAYK KINKIIDSGR YRNIMDMNAG LGGFAAALES
501: PKLWVMNVVP TIAEKSTLGA VYERGLIGIY HDWCEAFSTY PRTYDLIHAH GVFSLYKDKC DAEDILLEMD RILRPEGAVI FRDEVDVLIK VKKIVGGMRW
601: DTKLVDHEDG PLVSEKILVA VKQYWVVSAE NSTSSQ
101: KVFKPCRSKY IDYTPCQHQK RAMTFPRENM VYRERHCPAE NEKLHCLIPA PEGYVTPFPW PKSRDYVPYA NAPYKSLTVE KAVQNWIQYE GNVFRFPGGG
201: TQFPQGADAY INQLASVIPI DNGTVRTALD TGCGVASWGA YLLKKNVIAM SFAPRDNHEA QVQFALERGV PAVIGVLGTI KLPYPSRAFD MAHCSRCLIP
301: WGANDGIYMM EVDRVLRPGG YWVLSGPPIN WRNNYKAWLR PKEELQEEQR KIEDIARLLC WEKKYEQGEI AIWQKRVNAG ACSGRQDDAR TTFCKAEETD
401: DTWYKNMEPC ISPYPDVNSP EEVSGGELQP FPKRLYAVPP RVASGSIPGV SVETYLEDNK LWKKHLNAYK KINKIIDSGR YRNIMDMNAG LGGFAAALES
501: PKLWVMNVVP TIAEKSTLGA VYERGLIGIY HDWCEAFSTY PRTYDLIHAH GVFSLYKDKC DAEDILLEMD RILRPEGAVI FRDEVDVLIK VKKIVGGMRW
601: DTKLVDHEDG PLVSEKILVA VKQYWVVSAE NSTSSQ
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.