Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G226900.1 | Wheat | golgi | 98.86 | 98.86 |
| TraesCS5D01G234300.1 | Wheat | endoplasmic reticulum, golgi | 98.7 | 98.7 |
| HORVU5Hr1G065680.2 | Barley | cytosol, endoplasmic reticulum, golgi | 98.37 | 98.37 |
| EER96732 | Sorghum | endoplasmic reticulum, golgi | 91.53 | 90.94 |
| Os09t0415700-01 | Rice | golgi | 91.04 | 90.75 |
| Zm00001d020461_P001 | Maize | plasma membrane | 90.23 | 90.08 |
| KRH70718 | Soybean | endoplasmic reticulum | 76.87 | 77.76 |
| GSMUA_Achr3P20050_001 | Banana | endoplasmic reticulum, golgi | 74.59 | 77.63 |
| KRH74853 | Soybean | endoplasmic reticulum, golgi | 76.38 | 77.27 |
| CDY50730 | Canola | cytosol | 62.22 | 77.02 |
| KRH45909 | Soybean | endoplasmic reticulum | 75.9 | 76.64 |
| KRG99086 | Soybean | endoplasmic reticulum | 75.24 | 75.99 |
| VIT_17s0000g06050.t01 | Wine grape | cytosol | 74.59 | 75.08 |
| Solyc06g069870.2.1 | Tomato | endoplasmic reticulum | 74.92 | 74.8 |
| PGSC0003DMT400016774 | Potato | endoplasmic reticulum, golgi | 74.43 | 74.67 |
| PGSC0003DMT400080300 | Potato | endoplasmic reticulum, golgi | 74.43 | 74.67 |
| Solyc01g010870.2.1 | Tomato | nucleus, unclear | 73.78 | 74.63 |
| CDY46435 | Canola | endoplasmic reticulum, golgi | 73.29 | 74.63 |
| Solyc05g007490.2.1 | Tomato | nucleus, plastid, unclear | 74.1 | 74.35 |
| CDY16198 | Canola | endoplasmic reticulum, golgi | 73.29 | 74.26 |
| Bra016293.1-P | Field mustard | endoplasmic reticulum, golgi | 73.78 | 74.14 |
| Bra024678.1-P | Field mustard | endoplasmic reticulum, golgi | 74.1 | 74.1 |
| CDY40268 | Canola | endoplasmic reticulum, golgi | 73.13 | 74.09 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 74.27 | 74.03 |
| Bra012437.1-P | Field mustard | endoplasmic reticulum, golgi | 73.78 | 73.78 |
| CDY45006 | Canola | endoplasmic reticulum, golgi | 72.48 | 73.55 |
| VIT_01s0026g02340.t01 | Wine grape | golgi | 73.94 | 71.38 |
| PGSC0003DMT400050242 | Potato | golgi | 71.01 | 70.78 |
| Solyc03g116150.2.1 | Tomato | nucleus | 67.26 | 70.72 |
| KRH63351 | Soybean | endoplasmic reticulum | 69.22 | 70.13 |
| TraesCS1B01G226800.1 | Wheat | endoplasmic reticulum, golgi | 68.4 | 69.54 |
| TraesCS5B01G423200.2 | Wheat | cytosol, endoplasmic reticulum, golgi, mitochondrion | 69.87 | 69.08 |
| KRH54546 | Soybean | golgi | 64.82 | 68.86 |
| TraesCS4B01G125500.1 | Wheat | endoplasmic reticulum | 65.64 | 65.21 |
| TraesCS6B01G269400.1 | Wheat | mitochondrion, plastid | 56.51 | 53.97 |
| TraesCS2B01G418400.1 | Wheat | golgi | 55.7 | 53.6 |
| TraesCS3B01G427600.1 | Wheat | cytosol | 32.41 | 52.09 |
| TraesCS6B01G029000.1 | Wheat | cytosol | 53.42 | 51.98 |
| TraesCS2B01G419000.1 | Wheat | golgi, plastid | 41.04 | 43.6 |
| TraesCS1B01G213600.1 | Wheat | endoplasmic reticulum | 43.32 | 41.76 |
| TraesCS1B01G170600.2 | Wheat | endoplasmic reticulum, golgi | 38.11 | 37.99 |
| TraesCS7B01G342700.1 | Wheat | plastid | 37.78 | 37.85 |
| TraesCS1B01G250100.1 | Wheat | plasma membrane | 34.2 | 35.29 |
| TraesCS3B01G395100.1 | Wheat | plastid | 38.11 | 33.1 |
| TraesCS1B01G305900.1 | Wheat | mitochondrion | 33.88 | 31.18 |
| TraesCS3B01G439800.3 | Wheat | cytosol, golgi, mitochondrion, plastid, vacuole | 38.6 | 29.51 |
| TraesCS3B01G380800.1 | Wheat | plastid | 34.36 | 29.39 |
| TraesCS5B01G413400.3 | Wheat | mitochondrion | 29.8 | 25.35 |
| TraesCS7B01G286500.1 | Wheat | mitochondrion | 36.48 | 24.51 |
| TraesCS4B01G098500.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 35.5 | 24.33 |
| TraesCS5B01G120300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 35.5 | 21.39 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G225500.1 | EnsemblPlantsGene:TraesCS5B01G225500 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | ncoils:Coil |
| PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1061 | PFAM:PF03141 | SUPFAM:SSF53335 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr5B:-:401009164..401011674
Molecular Weight (calculated)
68997.1 Da
IEP (calculated)
8.861
GRAVY (calculated)
-0.350
Length
614 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVKGGPADN RTRSTVSICI VIGLCCFFYI LGAWQKSGFG KGDSIALEIT KRTDCTILPN LSFDTHHSKQ GSSRDLVSPV KKFKPCPDRF TDYTPCQDQN
101: RAMKFPRENM NYRERHCPPQ KEKLHCLVPP PKGYVAPFPW PKSRDYVPFA NCPYKSLTVE KAIQNWVQYE GNVFRFPGGG TQFPQGADKY IDQLASVIPI
201: ANGTVRTALD TGCGVASWGA YLLKRNVLAM SFAPRDSHEA QVQFALERGV PAVIGVLGTI KLPYPSRAFD MAHCSRCLIP WGMNDGLYMM EVDRVLRPGG
301: YWVLSGPPIN WKANYKGWQR TKEDLEAEQN KIEEMAKLLC WEKVSEKGET AIWRKRVNTE SCPSRLEEST VQMCESTNAD DVWYKKMKAC VTPLPDVENP
401: SEVAGGAIEP FPSRLNAIPP RISNGLIPGV SSQAYQKDNK MWKKHVKAYS NVNKYLLTGR YRNIMDMNAG FGGFAAAIES PKSWVMNVVP TIAKIATLGA
501: VYERGLIGIY HDWCEAFSTY PRTYDLIHAS GLFTLYSNKC SMEDILLEMD RILRPEGAVI MRDDVDVLTK VNKLARGMRW NTKLVDHEDG PLVREKILYA
601: VKQYWVGGNQ TAAS
101: RAMKFPRENM NYRERHCPPQ KEKLHCLVPP PKGYVAPFPW PKSRDYVPFA NCPYKSLTVE KAIQNWVQYE GNVFRFPGGG TQFPQGADKY IDQLASVIPI
201: ANGTVRTALD TGCGVASWGA YLLKRNVLAM SFAPRDSHEA QVQFALERGV PAVIGVLGTI KLPYPSRAFD MAHCSRCLIP WGMNDGLYMM EVDRVLRPGG
301: YWVLSGPPIN WKANYKGWQR TKEDLEAEQN KIEEMAKLLC WEKVSEKGET AIWRKRVNTE SCPSRLEEST VQMCESTNAD DVWYKKMKAC VTPLPDVENP
401: SEVAGGAIEP FPSRLNAIPP RISNGLIPGV SSQAYQKDNK MWKKHVKAYS NVNKYLLTGR YRNIMDMNAG FGGFAAAIES PKSWVMNVVP TIAKIATLGA
501: VYERGLIGIY HDWCEAFSTY PRTYDLIHAS GLFTLYSNKC SMEDILLEMD RILRPEGAVI MRDDVDVLTK VNKLARGMRW NTKLVDHEDG PLVREKILYA
601: VKQYWVGGNQ TAAS
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.