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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16198 Canola endoplasmic reticulum, golgi 98.53 99.83
Bra012437.1-P Field mustard endoplasmic reticulum, golgi 96.74 96.74
AT1G26850.2 Thale cress endoplasmic reticulum, golgi 96.09 95.78
Bra016293.1-P Field mustard endoplasmic reticulum, golgi 94.95 95.42
KRH74853 Soybean endoplasmic reticulum, golgi 79.15 80.07
KRH70718 Soybean endoplasmic reticulum 78.5 79.41
KRG99086 Soybean endoplasmic reticulum 78.5 79.28
KRH45909 Soybean endoplasmic reticulum 78.01 78.78
PGSC0003DMT400016774 Potato endoplasmic reticulum, golgi 76.55 76.8
Solyc01g010870.2.1 Tomato nucleus, unclear 75.73 76.61
VIT_01s0026g02340.t01 Wine grape golgi 78.99 76.26
Solyc05g007490.2.1 Tomato nucleus, plastid, unclear 75.41 75.65
GSMUA_Achr3P01520_001 Banana endoplasmic reticulum, golgi 72.64 75.59
PGSC0003DMT400080300 Potato endoplasmic reticulum, golgi 75.08 75.33
GSMUA_Achr3P20050_001 Banana endoplasmic reticulum, golgi 72.15 75.08
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 75.24 74.88
TraesCS5A01G226900.1 Wheat golgi 74.27 74.27
TraesCS5D01G234300.1 Wheat endoplasmic reticulum, golgi 74.27 74.27
TraesCS5B01G225500.1 Wheat cytosol, endoplasmic reticulum, golgi 74.1 74.1
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 73.78 73.78
EER96732 Sorghum endoplasmic reticulum, golgi 73.78 73.3
Zm00001d020461_P001 Maize plasma membrane 72.96 72.85
GSMUA_Achr8P16940_001 Banana endoplasmic reticulum, golgi 42.35 72.83
Os09t0415700-01 Rice golgi 72.48 72.24
HORVU5Hr1G102720.2 Barley cytosol 59.61 71.62
Os03t0379100-01 Rice endoplasmic reticulum, golgi, vacuole 69.06 69.39
TraesCS5D01G429900.1 Wheat endoplasmic reticulum, golgi, vacuole 68.57 68.79
TraesCS5B01G423200.2 Wheat cytosol, endoplasmic reticulum, golgi, mitochondrion 68.4 67.63
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 67.1 67.54
TraesCS5A01G421600.2 Wheat endoplasmic reticulum 68.24 67.47
Bra013282.1-P Field mustard endoplasmic reticulum, golgi, vacuole 66.45 65.81
Zm00001d029336_P002 Maize cytosol 67.1 59.97
Zm00001d047183_P002 Maize golgi 58.47 57.53
Bra017538.1-P Field mustard golgi, plasma membrane 65.8 55.88
Bra033172.1-P Field mustard cytosol 54.4 53.87
Bra037916.1-P Field mustard cytosol 54.4 53.44
Bra041005.1-P Field mustard cytosol 55.21 53.13
Bra035476.1-P Field mustard cytosol 54.89 52.57
Bra008529.1-P Field mustard mitochondrion 52.44 51.85
Bra039319.1-P Field mustard golgi 52.28 50.79
Bra004933.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion, plastid 52.28 50.79
Bra000296.1-P Field mustard plastid 43.97 49.18
Bra023213.1-P Field mustard endoplasmic reticulum, golgi 40.55 41.5
Bra000959.1-P Field mustard plastid 40.23 41.37
Bra012557.1-P Field mustard cytosol, golgi, nucleus 39.41 40.27
Bra033872.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plasma membrane 39.25 39.97
Bra020975.1-P Field mustard endoplasmic reticulum, golgi 38.6 39.77
Bra001909.1-P Field mustard endoplasmic reticulum, golgi 36.32 36.8
Bra006254.1-P Field mustard endoplasmic reticulum, golgi 36.16 36.51
Bra015316.1-P Field mustard endoplasmic reticulum, golgi 36.48 35.96
Bra037356.1-P Field mustard mitochondrion 40.39 35.84
Bra030570.1-P Field mustard endoplasmic reticulum, golgi 36.16 35.81
Bra014936.1-P Field mustard endoplasmic reticulum, golgi, vacuole 35.67 35.73
Bra029822.1-P Field mustard mitochondrion, plastid 33.22 34.93
Bra000181.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 32.9 34.59
Bra015681.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 36.32 34.41
Bra009489.1-P Field mustard plastid 32.74 34.01
Bra013374.1-P Field mustard cytosol, golgi 38.6 33.52
Bra010830.1-P Field mustard golgi 37.13 33.43
Bra000145.1-P Field mustard endoplasmic reticulum 35.5 32.15
Bra005018.1-P Field mustard mitochondrion 35.83 31.7
Bra032319.1-P Field mustard cytosol 37.78 30.81
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 37.13 30.4
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 36.97 29.79
Bra014710.1-P Field mustard endoplasmic reticulum, golgi, vacuole 32.41 29.44
Bra038881.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid, vacuole 36.97 25.17
Bra025737.1-P Field mustard mitochondrion 29.48 25.14
Bra009158.1-P Field mustard cytosol 37.46 24.11
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 35.83 23.55
Bra036837.1-P Field mustard golgi, mitochondrion, plasma membrane, plastid, vacuole 33.22 22.32
Bra031938.1-P Field mustard extracellular, mitochondrion, nucleus, plastid 7.65 15.77
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EnsemblPlantsGene:Bra024678EnsemblPlants:Bra024678.1EnsemblPlants:Bra024678.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0032259UniProt:M4E7C3PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF1051InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0002542820
SEG:seg:::::
Description
AT1G26850 (E=0.0) | dehydration-responsive family protein
Coordinates
chrA09:-:23552269..23554852
Molecular Weight (calculated)
69490.6 Da
IEP (calculated)
7.206
GRAVY (calculated)
-0.403
Length
614 amino acids
Sequence
(BLAST)
001: MAIKSSSADN KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSISGSSAK VKTFEPCDAL YTDYTPCQDQ
101: RRAMTFPRDS MIYRERHCAP ESEKLRCLVP APKGYVTPFS WPKSRDYVPY ANAPYKALTV EKAIQNWIQY EGEVFRFPGG GTQFPQGADK YIDQLASVIP
201: MGNGTVRTAL DTGCGVASWG AYLWSRNVRA MSFAPRDSHE AQVQFALERG VPAVIGVLGT IKLPYPTRAF DMAHCSRCLI PWGANDGMYL MEVDRVLRPG
301: GYWILSGPPI NWKINYKAWQ RPKEELQEEQ RKIEETAKLL CWEKKYEHGE IAIWQKRVND DACRSRQDDP RANFCKTDDT DDVWYKKMEA CITPYPETSS
401: SDEVAGGELQ VFPDRLNAVP PRISSGSISG VTVDAYEDDN RQWKKHVKAY KRINSLLDTG RYRNIMDMNA GFGGFAAAIE SQKLWVMNVV PTIAEKNRLG
501: VVYERGLIGI YHDWCEAFST YPRTYDLIHA NHLFSLYKNK CNADDILLEM DRILRPEGAV IIRDDVDTLI KVKRIISGMR WDSKLVDHED GPLVNEKVLI
601: AVKQYWVTNS TSAQ
Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.