Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G102720.2 Barley cytosol 73.11 87.28
Os03t0379100-01 Rice endoplasmic reticulum, golgi, vacuole 84.75 84.62
TraesCS5D01G429900.1 Wheat endoplasmic reticulum, golgi, vacuole 84.43 84.15
TraesCS5B01G423200.2 Wheat cytosol, endoplasmic reticulum, golgi, mitochondrion 84.59 83.09
TraesCS5A01G421600.2 Wheat endoplasmic reticulum 83.93 82.45
Zm00001d029336_P002 Maize cytosol 92.3 81.95
Zm00001d047183_P002 Maize golgi 82.79 80.93
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 73.77 72.93
GSMUA_Achr3P01520_001 Banana endoplasmic reticulum, golgi 70.16 72.54
CDY50730 Canola cytosol 58.69 72.18
KRH70718 Soybean endoplasmic reticulum 69.51 69.85
GSMUA_Achr8P16940_001 Banana endoplasmic reticulum, golgi 40.82 69.75
KRH74853 Soybean endoplasmic reticulum, golgi 68.85 69.19
EER96732 Sorghum endoplasmic reticulum, golgi 70.0 69.09
PGSC0003DMT400080300 Potato endoplasmic reticulum, golgi 69.02 68.79
VIT_17s0000g06050.t01 Wine grape cytosol 68.69 68.69
Solyc05g007490.2.1 Tomato nucleus, plastid, unclear 68.85 68.63
KRG99086 Soybean endoplasmic reticulum 67.87 68.09
KRH45909 Soybean endoplasmic reticulum 67.87 68.09
PGSC0003DMT400016774 Potato endoplasmic reticulum, golgi 68.2 67.97
Solyc06g069870.2.1 Tomato endoplasmic reticulum 68.03 67.48
AT1G26850.2 Thale cress endoplasmic reticulum, golgi 68.03 67.37
CDY46435 Canola endoplasmic reticulum, golgi 66.56 67.33
Bra016293.1-P Field mustard endoplasmic reticulum, golgi 67.38 67.27
Solyc01g010870.2.1 Tomato nucleus, unclear 66.89 67.22
Bra024678.1-P Field mustard endoplasmic reticulum, golgi 67.54 67.1
CDY16198 Canola endoplasmic reticulum, golgi 66.56 67.0
CDY45006 Canola endoplasmic reticulum, golgi 66.39 66.94
CDY40268 Canola endoplasmic reticulum, golgi 66.39 66.83
Bra012437.1-P Field mustard endoplasmic reticulum, golgi 67.21 66.78
VIT_01s0026g02340.t01 Wine grape golgi 69.51 66.67
Solyc03g116150.2.1 Tomato nucleus 63.61 66.44
PGSC0003DMT400050242 Potato golgi 66.23 65.58
KXG38879 Sorghum mitochondrion 64.43 65.07
KRH63351 Soybean endoplasmic reticulum 63.93 64.36
KRH54546 Soybean golgi 59.84 63.15
EES08791 Sorghum golgi 62.79 60.7
EER89033 Sorghum cytosol 55.74 54.84
KXG26943 Sorghum plastid 55.57 52.89
EER93951 Sorghum peroxisome 53.28 51.02
EES05735 Sorghum mitochondrion, plastid 54.26 49.7
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 40.0 41.64
OQU88046 Sorghum plastid 40.66 40.0
EER94413 Sorghum plasma membrane 39.51 39.31
OQU91634 Sorghum endoplasmic reticulum, golgi 38.2 37.82
EES03874 Sorghum mitochondrion 36.89 32.7
OQU77908 Sorghum plasma membrane, plastid 32.95 32.37
EES11713 Sorghum plastid 36.89 31.87
EES03991 Sorghum plastid 38.52 29.71
OQU87776 Sorghum endoplasmic reticulum, golgi 31.97 28.8
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 36.07 24.61
OQU77087 Sorghum mitochondrion 36.23 23.94
KXG23110 Sorghum endoplasmic reticulum 35.25 19.76
EER93372 Sorghum mitochondrion 32.3 15.04
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EntrezGene:8080476UniProt:C5WYL4EnsemblPlants:EER94782ProteinID:EER94782
ProteinID:EER94782.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0032259PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1051
InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3001G355800SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0001A8335B
RefSeq:XP_002467784.1:::::
Description
hypothetical protein
Coordinates
chr1:-:64535081..64540009
Molecular Weight (calculated)
69339.3 Da
IEP (calculated)
8.447
GRAVY (calculated)
-0.399
Length
610 amino acids
Sequence
(BLAST)
001: MARNLTENRT RNTLIVIVIL GLCSFFYLLG AWQKSGSGGG DKTHQWVIEQ MKCAQLPNLS FETHHSASNL PNDTGSSKIE PFKPCDEQYT DYTPCEEQKR
101: AMSFPRDNMI YRERHCPLDK EKLHCLIPAP KGYVTPFRWP KSRDFVPYAN VPHKSLTVEK AIQNWVHYEG NVFRFPGGGT QFPQGADKYI DQLASVIPIA
201: EGKVRTALDT GCGVASLGAY LLKKNVLTMS FAPRDNHEAQ VQFALERGVP AYIGVLGSIK LPFPSRVFDM AHCSRCLIPW SGNDGMYMME VDRVLRPGGY
301: WVLSGPPIGW KIHYKGWQRS KEDLRNEQRN IEQFAQLLCW NKISEKDGIA IWRKRLNDKS CSMKQDNPKG GKCDLTSDSD VWYKKMEVCI TPLPEVNSVS
401: EVAGGQLEPF PKRLYAVPPR ITLGSVPGFS VQSYEEDNNL WQKHVKAYKK TNNLLDTGRY RNIMDMNAGL GSFAAALESP KLWVMNVIPT IANTSTLGVI
501: YERGLIGMYH DWCEGFSTYP RTYDLIHSND IFSLYQNKCQ FEDILLEMDR ILRPEGAVII RDKVDVLVKV EKIANAMRWK TRLADHEGGP HVPEKILFVV
601: KQYWDVSTSS
Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.