CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035876_P002	Maize	cytosol	95.16	95.16
Os06t0103900-01	Rice	cytosol, golgi, mitochondrion, plastid	84.68	83.2
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	79.68	78.54
TraesCS4A01G458400.1	Wheat	endoplasmic reticulum, golgi	79.35	78.22
TraesCS7A01G031100.1	Wheat	endoplasmic reticulum, golgi	79.35	78.22
GSMUA_Achr1P11480_001	Banana	cytosol	72.26	72.73
HORVU7Hr1G003860.2	Barley	plasma membrane	80.81	70.76
CDX85977	Canola	cytosol	54.68	70.19
CDX93797	Canola	cytosol	54.52	69.98
VIT_02s0025g03200.t01	Wine grape	cytosol	70.16	68.83
Solyc08g013740.2.1	Tomato	unclear	69.03	67.83
PGSC0003DMT400014851	Potato	cytosol	68.23	67.79
KRH60099	Soybean	cytosol	67.42	67.09
KRH41379	Soybean	cytosol	67.9	66.93
CDY70936	Canola	cytosol	19.35	65.57
EER93951	Sorghum	peroxisome	66.29	64.52
Bra037916.1-P	Field mustard	cytosol	64.52	64.0
CDX99539	Canola	cytosol	64.52	64.0
AT4G10440.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, nucleus	65.32	63.98
CDX94256	Canola	cytosol	63.87	63.97
CDX84046	Canola	cytosol	63.06	63.89
Bra033172.1-P	Field mustard	cytosol	63.39	63.39
CDY25257	Canola	cytosol	63.39	63.39
CDY44966	Canola	cytosol	63.06	63.06
CDX99540	Canola	cytosol	54.52	62.94
AT1G33170.1	Thale cress	cytosol	64.35	62.44
Bra041005.1-P	Field mustard	cytosol	63.55	61.76
Bra035476.1-P	Field mustard	cytosol	63.39	61.31
KXG26943	Sorghum	plastid	60.32	58.35
EER96732	Sorghum	endoplasmic reticulum, golgi	55.65	55.83
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	54.84	55.74
KXG38879	Sorghum	mitochondrion	53.87	55.3
EES05735	Sorghum	mitochondrion, plastid	57.74	53.75
EES08791	Sorghum	golgi	52.58	51.66
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	41.94	44.37
EER94413	Sorghum	plasma membrane	42.42	42.9
OQU88046	Sorghum	plastid	38.71	38.71
OQU91634	Sorghum	endoplasmic reticulum, golgi	37.26	37.5
EES03874	Sorghum	mitochondrion	38.23	34.45
OQU77908	Sorghum	plasma membrane, plastid	34.19	34.14
EES11713	Sorghum	plastid	37.58	33.0
OQU87776	Sorghum	endoplasmic reticulum, golgi	32.1	29.39
EES03991	Sorghum	plastid	37.42	29.33
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	37.1	25.73
OQU77087	Sorghum	mitochondrion	35.97	24.16
KXG23110	Sorghum	endoplasmic reticulum	36.13	20.59
EER93372	Sorghum	mitochondrion	31.29	14.81

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EntrezGene:8065363	UniProt:C5Z236	ncoils:Coil	EnsemblPlants:EER89033
ProteinID:EER89033	ProteinID:EER89033.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	ProteinID:KXG19090.1	ProteinID:OQU75675.1
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1058	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3010G002600
SUPFAM:SSF53335	unigene:Sbi.19445	TMHMM:TMhelix	UniParc:UPI0001A89945	RefSeq:XP_002437666.1	:

Description

hypothetical protein

Coordinates

chr10:-:238608..243715

Molecular Weight (calculated)

71031.5 Da

IEP (calculated)

8.538

GRAVY (calculated)

-0.460

Length

620 amino acids

Sequence
(BLAST)

001: MAKEQDGSPK VRHPEFQRMR VTLTIGVIGL CVTAYILGAW QGTSNGINSS LISTRTQCKD NVRSSGARLD FQAHHQVGFN ESVLAVEKFP PCQLKYSEYT
101: PCQDPRRARK FPKKMMQYRE RHCPKKEDML RCLIPAPPNY NNPFQWPRSR DYAWFNNIPH RELSIEKAVQ NWIHVEGDLL RFPGGGTMFP HGADAYIDGI
201: NALVPLNEGN IRTALDTGCG VASWGAYLMK RNITTMSFAP RDSHEAQVQF ALERGVPAMI GVMGTERLPY PARAFDMAHC SRCLIPWNKL DGIYLIEVDR
301: VLRPGGYWIL SGPPIHWKRH YKGWERTEED LKQEQDEIED LAKRLCWKKV IEKGDLAIWQ KPINHVECVD SRKVYDAPQI CKSNDVDSAW YKKMDSCISP
401: LPDVKSEDEV AGGALERWPK RAFVVPPRII RGSVPGFTPE KFQEDNKVWS ERVNHYKKLI PPLGKRRYRN VMDMNAGIGG FAAALMEYPL WVMNVVPSGL
501: AHDTLGVIYE RGFIGTYQDW CEAFSTYPRT YDLIHADKIF SSYQDRCDIT YILLEMDRIL RPEGTVIIRD NVEVLVKVQA ITGGMRWKSQ IMDHESGPFN
601: PDKILVAVKT YWTGKPMEKQ

Best Arabidopsis Sequence Match ( AT4G10440.1 )
(BLAST)

001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN

Arabidopsis Description

Probable methyltransferase PMT17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX8]
SUBAcon: [mitochondrion,endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.