CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030012_P001	Maize	golgi	96.36	96.36
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	85.26	85.26
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	84.93	84.93
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	84.93	84.93
Os10t0569300-01	Rice	golgi	82.45	82.31
HORVU1Hr1G054470.1	Barley	mitochondrion, plastid	73.51	71.15
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	70.36	69.56
KRH57576	Soybean	endoplasmic reticulum	69.7	68.68
KRH04297	Soybean	endoplasmic reticulum	69.54	68.52
EER96732	Sorghum	endoplasmic reticulum, golgi	67.05	65.53
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	65.89	64.61
Solyc08g077240.2.1	Tomato	nucleus	65.73	64.45
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	65.07	64.43
CDY70748	Canola	cytosol, peroxisome	45.86	64.42
CDY03207	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	65.4	63.5
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	64.9	63.23
CDX78823	Canola	endoplasmic reticulum, golgi, vacuole	64.9	63.23
AT4G18030.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	64.9	63.12
EES08791	Sorghum	golgi	60.76	58.16
Bra017538.1-P	Field mustard	golgi, plasma membrane	65.23	54.5
CDY35169	Canola	cytosol, endoplasmic reticulum, golgi	65.23	54.34
EER89033	Sorghum	cytosol	55.3	53.87
KXG26943	Sorghum	plastid	54.97	51.79
EER93951	Sorghum	peroxisome	53.97	51.18
EES05735	Sorghum	mitochondrion, plastid	53.48	48.5
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	40.89	42.15
EER94413	Sorghum	plasma membrane	41.89	41.27
OQU88046	Sorghum	plastid	38.74	37.74
OQU91634	Sorghum	endoplasmic reticulum, golgi	37.91	37.18
OQU77908	Sorghum	plasma membrane, plastid	34.27	33.33
EES03874	Sorghum	mitochondrion	35.76	31.4
EES11713	Sorghum	plastid	35.93	30.74
EES03991	Sorghum	plastid	38.58	29.46
OQU87776	Sorghum	endoplasmic reticulum, golgi	31.79	28.36
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	34.77	23.49
OQU77087	Sorghum	mitochondrion	35.43	23.19
KXG23110	Sorghum	endoplasmic reticulum	35.26	19.58
EER93372	Sorghum	mitochondrion	30.3	13.97

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A1B6QLS7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773
GO:GO:0005774	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030312	GO:GO:0032259
EnsemblPlants:KXG38879	ProteinID:KXG38879	ProteinID:KXG38879.1	ProteinID:KXG38880.1	PFAM:PF03141	PFscan:PS51257
PANTHER:PTHR10108	PANTHER:PTHR10108:SF954	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G291400	SUPFAM:SSF53335
TMHMM:TMhelix	UniParc:UPI0001C80B8A	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:56811046..56817798

Molecular Weight (calculated)

68882.6 Da

IEP (calculated)

7.210

GRAVY (calculated)

-0.417

Length

604 amino acids

Sequence
(BLAST)

001: MRGSRMNPGD RRTRSTMTIV IVMGLSCFFY ILGAWQKSGT GRGDSIALRV NQETDCTILP NLHFETHHTI SGTNPLIMSN KMIEPCHIRY SDYTPCQDQD
101: RAMTFPRENM TYRERHCPVE NEKLHCLIPA PKGYVTPFSW PKSRDYVPYA NAPYKSLIVE KAVQNWIQYQ GDVFKFPGGG TMFPNGANAY LDELASVIPL
201: ADGTIRTALD TGCGVASFGA YLMDRNILTM SFAPRDSHEA QVQFALERGV PAVIGVLGTI KLPYPSRSFD MAHCSRCLIP WESNGGMYMM EVDRVLRPGG
301: YWILSGPPIN WKKYYQSWKR SKQDAEEDQH IIENIAEMLC WDKIYEKDDI AIWQKQRNSY SCHQKDGHAS KMCKVQDADD VWYKKMESCV TPPVEAAQLK
401: KFPDRLSAIP PRILEGQVPG ITEEVYEEDN KLWKKHVNTY KRVNKLIGSS RYRNIMDMNA GLGSFAATLH SPMSWVMNVV PSISERNTLG IIYDRGLIGI
501: YHDWCEAFST YPRTYDLIHG NGIFSLYQNK CDAEDILLEM DRILRPEGAV ILRDSADVLN KVRSMVAGMR WKSKLLDHED GPHVPEKILI SVKEYWVGSE
601: EQNS

Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.