Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • plastid 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043012_P018 Maize golgi 67.95 66.19
CDY10370 Canola cytosol 25.85 63.64
Os01t0828300-01 Rice golgi, plastid 60.86 61.13
TraesCS3A01G348800.1 Wheat golgi 61.45 58.67
TraesCS3D01G342700.1 Wheat golgi 61.74 58.38
TraesCS3B01G380800.1 Wheat plastid 61.45 57.94
KRG97692 Soybean plastid 31.91 55.96
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 61.15 55.35
GSMUA_Achr4P18750_001 Banana endoplasmic reticulum, golgi 48.89 53.22
VIT_13s0067g01690.t01 Wine grape endoplasmic reticulum, golgi 47.56 53.14
Bra000181.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 45.64 52.91
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 45.64 52.91
AT2G40280.1 Thale cress extracellular, plasma membrane 45.94 52.8
KRH31179 Soybean plasma membrane 46.23 52.69
KRH73268 Soybean endoplasmic reticulum 46.23 52.6
PGSC0003DMT400069743 Potato endoplasmic reticulum, golgi 46.82 51.71
KRH14916 Soybean nucleus 45.35 51.6
PGSC0003DMT400077225 Potato plastid 46.53 48.99
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 43.57 48.76
Solyc06g051000.2.1 Tomato plastid 45.94 48.44
AT3G56080.1 Thale cress endoplasmic reticulum, vacuole 43.28 48.03
CDY24913 Canola mitochondrion 45.35 45.68
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 43.57 44.7
Bra014710.1-P Field mustard endoplasmic reticulum, golgi, vacuole 42.98 43.05
Solyc05g052500.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 47.56 41.28
EES11713 Sorghum plastid 38.7 37.11
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 29.84 34.47
EES03991 Sorghum plastid 39.29 33.63
OQU91634 Sorghum endoplasmic reticulum, golgi 30.43 33.44
EER89033 Sorghum cytosol 29.39 32.1
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 28.8 31.97
KXG38879 Sorghum mitochondrion 28.36 31.79
KXG26943 Sorghum plastid 29.99 31.67
EER96732 Sorghum endoplasmic reticulum, golgi 28.8 31.55
EER93951 Sorghum peroxisome 29.54 31.4
EER94413 Sorghum plasma membrane 28.21 31.16
EES03874 Sorghum mitochondrion 31.61 31.1
EES08791 Sorghum golgi 28.8 30.9
OQU77908 Sorghum plasma membrane, plastid 27.03 29.47
OQU88046 Sorghum plastid 26.74 29.19
EES05735 Sorghum mitochondrion, plastid 28.66 29.13
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 37.08 28.08
OQU77087 Sorghum mitochondrion 37.81 27.74
KXG23110 Sorghum endoplasmic reticulum 38.55 23.99
EER93372 Sorghum mitochondrion 30.43 15.73
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1UniProt:A0A1W0W064GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259InterPro:Interferon-induced_GILTEnsemblPlants:OQU87776
ProteinID:OQU87776ProteinID:OQU87776.1PFAM:PF03141PFAM:PF03227PANTHER:PTHR10108PANTHER:PTHR10108:SF1050
InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3003G342500SUPFAM:SSF53335SignalP:SignalP-noTMUniParc:UPI0009DC8A08
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:66467291..66476921
Molecular Weight (calculated)
76773.0 Da
IEP (calculated)
8.004
GRAVY (calculated)
-0.230
Length
677 amino acids
Sequence
(BLAST)
001: MAPNPKPQPP LRLLPLVLLC LSPACAAGRV PVSVYYETLC PFCSAFVVND LSRVFRNGIS SIADLRLVPF GNGRVSADGT ITCQHGEEEC QLNAIEACVI
101: RIWPDAEQHF PFIQCVEHLA LTRKWDAWQA CFQETGLPYQ PAIDCYNSGY GRQLVLQYAA ETNALQPPHQ FVPWVVVNGK PLGDDYMNFE AYICSAYDGK
201: LPEACKGKHL AIAQETKASR GDKIWYNNVP HPKLVEYKKD QNWVRKSGNY FVFPGGGTQF KNGVTAYIRF IEQILPNIQW GIHTRTVLDV GCGVASFGGY
301: LLDRNVITMS FAPKDEHEAQ IQFALERGIP AFLAVIGTQK LPFPDNSFDV IHCARCRVHW YADGGKPLLE LNRILRPGGY YIWSATPVYR KDPRDIDDWN
401: AVVALTKSIC WRTVVRSRDI NKIGVVIYQK PTSNSCYIER KNNEPPLCSE SDRSRFPWYK PLDSCLFPSV PSSGGGNSWP IPWPERLNMK HSTTSNNSSI
501: QFPQEKIDSD TNYWKGLVSE VYLNEFAVNW SSVRNVMDMN AGFGGFAASI IDRPLWVMNV VPVDQPDTLH IIFNRGLIGV YHDWCESFNT YPRTYDLLHM
601: SHLLGPLTKR CHIIEIAAEI DRILRPGRWF VLQDTIDVIR KMDPVLRSLH YKTQIVKHQF LLATKGFWRP GSTDSKS
Best Arabidopsis Sequence Match ( AT2G40280.1 )
(BLAST)
001: MAISVQHVVV LLLSTLLIAI TFFLFTSDNA RFPFPSLSTT DYYTPIPKSP IPHRIVDVSS DQTPQKMKLN TSLEVGELKW DLCKGAESVD YIPCLDNYAA
101: IKQLKSRRHM EHRERHCPEP SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ FKFGVTHYVE FIEKALPSIK
201: WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG
301: FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL
401: WPKRLVSVKP QSISVKAETL KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD TLSVVYDRGL IGVYHDWCES
501: VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR
Arabidopsis Description
Probable methyltransferase PMT23 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ3]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.