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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 96.2 88.18
Bra014710.1-P Field mustard endoplasmic reticulum, golgi, vacuole 95.54 85.5
AT3G56080.1 Thale cress endoplasmic reticulum, vacuole 85.95 85.25
CDY10370 Canola cytosol 28.43 62.55
VIT_13s0067g01690.t01 Wine grape endoplasmic reticulum, golgi 60.66 60.56
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 58.02 60.1
PGSC0003DMT400069743 Potato endoplasmic reticulum, golgi 58.84 58.08
PGSC0003DMT400077225 Potato plastid 61.32 57.7
Solyc06g051000.2.1 Tomato plastid 61.16 57.63
GSMUA_Achr4P18750_001 Banana endoplasmic reticulum, golgi 56.36 54.82
CDY24913 Canola mitochondrion 57.19 51.49
Os01t0828300-01 Rice golgi, plastid 54.71 49.11
TraesCS1D01G294500.1 Wheat golgi, plasma membrane, plastid 54.05 49.03
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 53.06 48.93
Os05t0472200-01 Rice endoplasmic reticulum, golgi 52.56 48.85
TraesCS1B01G305900.1 Wheat mitochondrion 53.22 48.28
TraesCS1A01G297000.1 Wheat golgi 52.73 47.97
Zm00001d043012_P018 Maize golgi 54.38 47.34
TraesCS3D01G342700.1 Wheat golgi 55.54 46.93
TraesCS3A01G348800.1 Wheat golgi 54.88 46.83
Solyc05g052500.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 59.83 46.41
TraesCS3B01G380800.1 Wheat plastid 54.71 46.1
CDY43336 Canola cytosol 14.55 45.83
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 54.88 44.38
Zm00001d010599_P002 Maize endoplasmic reticulum, plasma membrane, plastid 53.72 43.74
OQU87776 Sorghum endoplasmic reticulum, golgi 48.76 43.57
CDY33299 Canola nucleus 41.49 41.56
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 46.94 41.34
CDY70936 Canola cytosol 11.9 39.34
CDX85977 Canola cytosol 31.41 39.34
CDX84330 Canola endoplasmic reticulum, plasma membrane 46.12 39.13
CDX93797 Canola cytosol 30.74 38.51
CDX83493 Canola golgi 26.28 38.41
CDY50730 Canola cytosol 31.41 38.31
CDY66535 Canola nucleus 41.32 38.17
CDY31339 Canola plasma membrane 48.1 38.09
CDY44314 Canola endoplasmic reticulum 46.28 37.63
CDX94669 Canola endoplasmic reticulum 46.45 37.52
CDY12278 Canola endoplasmic reticulum, golgi 37.02 37.33
CDY22567 Canola endoplasmic reticulum, golgi 37.02 37.33
CDY39830 Canola plasma membrane 47.6 37.31
CDX76494 Canola endoplasmic reticulum, golgi 36.03 37.2
CDY66721 Canola golgi 32.4 37.05
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 46.61 37.01
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 36.03 36.89
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 36.69 36.82
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 36.69 36.82
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 36.69 36.82
CDX99828 Canola golgi 45.45 36.67
CDY48339 Canola cytosol 45.62 36.51
CDY70748 Canola cytosol, peroxisome 25.45 35.81
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 47.11 35.67
CDX70565 Canola endoplasmic reticulum 35.54 35.36
CDY01971 Canola endoplasmic reticulum, extracellular 24.3 35.34
CDX78577 Canola endoplasmic reticulum, golgi 35.37 35.2
CDX94861 Canola endoplasmic reticulum, golgi 34.88 34.99
CDX87530 Canola cytosol, golgi, peroxisome, plastid 37.52 34.98
CDX92981 Canola endoplasmic reticulum, golgi 34.88 34.82
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 37.19 34.72
CDY20475 Canola endoplasmic reticulum, golgi 39.5 34.69
CDX70263 Canola plastid 33.88 34.63
CDX74837 Canola mitochondrion 39.34 34.54
CDX99540 Canola cytosol 30.58 34.45
CDY24949 Canola endoplasmic reticulum, plasma membrane 38.35 34.32
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 35.21 34.24
CDX84046 Canola cytosol 34.55 34.15
CDY07639 Canola endoplasmic reticulum 38.18 34.12
CDY54063 Canola mitochondrion 31.24 34.12
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 34.55 34.09
CDX98897 Canola golgi, mitochondrion 39.01 34.05
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 34.38 34.04
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 33.55 34.0
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 42.98 33.9
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 34.71 33.87
CDX74348 Canola plastid 33.39 33.84
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 46.94 33.81
CDY07198 Canola mitochondrion 33.22 33.56
CDX86634 Canola endoplasmic reticulum, golgi 34.38 33.55
CDY15505 Canola endoplasmic reticulum, golgi 34.38 33.55
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 34.38 33.55
CDX94256 Canola cytosol 34.21 33.44
CDY68187 Canola mitochondrion 34.05 33.39
CDX89824 Canola endoplasmic reticulum, golgi 34.21 33.39
CDY25257 Canola cytosol 34.21 33.39
CDY44966 Canola cytosol 34.21 33.39
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 36.2 33.33
CDY57187 Canola cytosol 17.19 33.33
CDX99539 Canola cytosol 34.38 33.28
CDY67390 Canola mitochondrion 39.5 33.19
CDY46435 Canola endoplasmic reticulum, golgi 33.06 33.17
CDY45006 Canola endoplasmic reticulum, golgi 33.06 33.06
CDY26666 Canola mitochondrion 39.17 33.05
CDY40268 Canola endoplasmic reticulum, golgi 33.06 33.0
CDY16198 Canola endoplasmic reticulum, golgi 32.89 32.84
CDX98606 Canola vacuole 36.03 32.83
CDY00911 Canola mitochondrion 31.74 32.82
CDY51142 Canola cytosol 33.39 32.74
CDY08621 Canola mitochondrion, plastid 31.57 32.71
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 33.39 32.17
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 33.55 32.12
CDY18904 Canola endoplasmic reticulum 33.55 32.07
CDY61681 Canola endoplasmic reticulum, golgi 35.87 31.82
CDX78919 Canola cytosol, golgi 36.2 30.98
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 34.88 29.1
CDX70102 Canola cytosol 39.01 25.08
CDY27362 Canola plasma membrane 33.39 20.02
CDY72237 Canola nucleus 12.23 18.45
CDY33300 Canola plastid 1.32 3.35
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078I0H1UniProt:A0A078I0H1EnsemblPlants:CDY43341
ProteinID:CDY43341ProteinID:CDY43341.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00076397001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF887InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EAFAB3SEG:seg::
Description
BnaC04g25150DBnaC04g25150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0H1]
Coordinates
chrLK032553:-:75496..78152
Molecular Weight (calculated)
69001.3 Da
IEP (calculated)
8.497
GRAVY (calculated)
-0.284
Length
605 amino acids
Sequence
(BLAST)
001: MNIFQSRKFS GLCVLSILLV SVTILLLTND TIDLFPYLSL SYLRRSSLSD VPTFTPTSSP TTVDSPPPPP EPPVSQTPVV DDDEPVDQDL EMDWVKDKTS
101: LKVEWKRCES PDYMPCLDNV KAIKKLKSKR NMEHRERHCP VLAPRCLVPL PKRYKVPLPW PKSRDMIWYD NAPHPKLVDY KKDQNWIRKT GPFFVFPGGG
201: TQFKDGVIHY INYIQKTLPV LEWGKKVRVV LDVGCGVASF GGTLLDKNVI TMSFAPKDEH EAQIQFALER GIPATLAVIG TQKLPFPDNA YDVIHCARCR
301: VHWHGYGGRP LLELNRILRP GGFFVWSATP VYQHDEGHRN VWKTMESLTT SMCWKVVART RFTKVGFVIY QKPDSDSCYG ARKNNEPPLC NEEDTKKNSS
401: WYTPLLSCVP KVPVGLSGKW PSQWPGRLAD RPVTEQISEE SFREDTRLWS ETVSDIYLNG LAINWTKIHN VMDMNAGYGG FAAALINKPL WVMNVVPVQG
501: EDTLSMIFDR GLIGIYHEWC ESFNTYPRSY DLLHSSFLLT NLSQRCDLVE VVVEIDRIVR PGGYLVVQDT VEMMKKLNPI LLSLRWSTNV YKGKFLVGLK
601: SSWRP
Best Arabidopsis Sequence Match ( AT3G56080.1 )
(BLAST)
001: MIKNIFQSRK LSGLCVLSIL LVSVTILLLT NDTIDLFPYL SLPYLPRSSL SVIPTSTPIS SPTNDSSPPL ESPVNQTRVD DHPDDQGLEL DWLKDDKQWN
101: VSLKIDWKRC ESPDYIPCLD NTKAIKKLKS KRNMEHRERH CPERSPKCLV PLPQHYKVPL PWPQSRDMIW YDNVPHPKLV EYKKDQNWVR KSGPFFVFPG
201: GGTQFKDGVI HYINFIQKTL PILDWGKKVR VVLDVGCGVA SFGGTLLDKN VITMSFAPKD EHEAQIQFAL ERGIPATLAV IGTQKLPFPD NAYDVIHCAR
301: CRVHWHGYGG RPLLELNRVL RPGGFFVWSA TPVYQHDEGH RNVWKTMESL TTSMCWKVVA RTRFTKVGFV IYQKPDSDSC YESRKNKDPP LCIEEETKKN
401: SSWYTPLLTC LPKLPVSPIG KWPSGWPERL TETPVSLFRE QRSEESFRED SKLWSGVMSN IYLYSLAINW TRIHNVMDMN AGYGGFAAAL INKPLWVMNV
501: IPVEGEDTLS TIFDRGLIGI YHDWCESFNT YPRSYDLLHS SFLFTNLSQR CDLMEVVVEI DRILRPGGYL AVQDTVEMLK KLNPILLSLR WSTNLYRGKF
601: LVGLKSSWRP
Arabidopsis Description
Probable methyltransferase PMT22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN3]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.