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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane, plastid, vacuole
Any Predictor:golgi, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010830.1-P Field mustard golgi 98.11 98.83
CDY43336 Canola cytosol 27.22 97.4
CDY66721 Canola golgi 69.72 90.55
CDX99828 Canola golgi 90.83 83.2
CDY44314 Canola endoplasmic reticulum 89.81 82.93
CDX94669 Canola endoplasmic reticulum 90.1 82.64
CDY48339 Canola cytosol 90.39 82.14
AT1G29470.1 Thale cress golgi 91.56 81.69
CDX84330 Canola endoplasmic reticulum, plasma membrane 81.51 78.54
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 80.93 72.97
Os12t0178300-00 Rice cytosol 25.18 65.28
GSMUA_Achr8P32550_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 62.45 64.13
GSMUA_Achr7P23260_001 Banana cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 65.79 61.92
CDY33299 Canola nucleus 52.84 60.1
Zm00001d002943_P002 Maize plasma membrane 58.66 60.06
Os04t0692400-01 Rice mitochondrion, peroxisome 58.22 59.08
CDY31339 Canola plasma membrane 65.21 58.64
EES11713 Sorghum plastid 59.97 58.36
CDY39830 Canola plasma membrane 65.5 58.29
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 64.92 58.07
TraesCS2D01G569900.1 Wheat plastid 58.95 57.61
TraesCSU01G022400.1 Wheat plastid 58.37 56.88
EES03991 Sorghum plastid 65.36 56.76
Zm00001d012211_P008 Maize plastid 65.21 56.57
PGSC0003DMT400006139 Potato nucleus 65.36 56.34
CDY66535 Canola nucleus 53.71 56.34
GSMUA_Achr8P30140_001 Banana nucleus 64.34 56.09
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 65.21 56.07
TraesCS3D01G401300.2 Wheat golgi 65.36 55.92
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 65.07 55.67
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 65.07 55.32
TraesCS3A01G406100.1 Wheat plastid 65.07 55.32
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 64.77 55.21
CDY10370 Canola cytosol 21.98 54.91
TraesCS2A01G560300.1 Wheat mitochondrion, peroxisome, plastid 57.93 53.78
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 65.5 53.57
VIT_18s0001g01270.t01 Wine grape plasma membrane 67.1 52.51
GSMUA_Achr11P... Banana mitochondrion 63.61 52.46
HORVU2Hr1G127220.1 Barley cytosol 58.81 51.99
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 62.74 51.68
KRH53330 Soybean endoplasmic reticulum 62.01 51.02
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 56.19 50.33
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 42.36 49.83
GSMUA_Achr8P08230_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 63.03 49.37
Os11t0186300-01 Rice plasma membrane 59.24 46.94
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 41.34 46.94
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 59.68 45.86
Zm00001d004720_P001 Maize golgi 59.83 45.36
HORVU4Hr1G017470.1 Barley vacuole 58.81 45.29
TraesCS4A01G220000.1 Wheat golgi 58.37 44.85
TraesCS4D01G094600.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole 58.22 44.79
TraesCS4B01G098500.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 58.37 44.75
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 58.66 43.24
CDY70936 Canola cytosol 11.5 43.17
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 41.34 43.03
CDY24913 Canola mitochondrion 42.07 43.01
CDY50730 Canola cytosol 29.69 41.13
CDX85977 Canola cytosol 28.82 40.99
CDX93797 Canola cytosol 28.68 40.79
CDX94861 Canola endoplasmic reticulum, golgi 35.66 40.63
CDX92981 Canola endoplasmic reticulum, golgi 35.81 40.59
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 36.1 40.46
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 35.81 40.26
CDX89824 Canola endoplasmic reticulum, golgi 35.95 39.84
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 35.95 39.84
TraesCS5D01G127100.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 58.81 39.72
TraesCS5B01G120300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plasma membrane 58.81 39.65
CDX86634 Canola endoplasmic reticulum, golgi 35.23 39.03
CDY15505 Canola endoplasmic reticulum, golgi 35.23 39.03
TraesCS5A01G114100.1 Wheat endoplasmic reticulum 58.95 38.98
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 33.33 38.75
CDX76494 Canola endoplasmic reticulum, golgi 33.04 38.74
Zm00001d041844_P021 Maize golgi, mitochondrion, nucleus, plasma membrane, plastid 59.24 38.54
KXG23110 Sorghum endoplasmic reticulum 60.26 38.05
CDY24949 Canola endoplasmic reticulum, plasma membrane 37.41 38.02
CDX70263 Canola plastid 32.75 38.01
CDY01971 Canola endoplasmic reticulum, extracellular 23.0 37.98
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 33.33 37.98
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 33.33 37.98
CDY07639 Canola endoplasmic reticulum 37.41 37.96
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 32.9 37.86
CDY12278 Canola endoplasmic reticulum, golgi 33.04 37.83
CDY46435 Canola endoplasmic reticulum, golgi 33.19 37.81
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 33.19 37.81
CDX99540 Canola cytosol 29.55 37.8
CDY07198 Canola mitochondrion 32.9 37.73
CDX74348 Canola plastid 32.75 37.69
CDY45006 Canola endoplasmic reticulum, golgi 33.19 37.69
CDY22567 Canola endoplasmic reticulum, golgi 32.9 37.67
CDX70565 Canola endoplasmic reticulum 33.33 37.66
CDY26666 Canola mitochondrion 39.3 37.66
CDX78577 Canola endoplasmic reticulum, golgi 33.19 37.5
CDY16198 Canola endoplasmic reticulum, golgi 33.04 37.46
CDY40268 Canola endoplasmic reticulum, golgi 33.04 37.46
CDY70748 Canola cytosol, peroxisome 23.44 37.44
CDX83493 Canola golgi 22.56 37.44
CDY25257 Canola cytosol 33.77 37.42
CDX98897 Canola golgi, mitochondrion 37.7 37.37
CDX94256 Canola cytosol 33.62 37.32
CDY67390 Canola mitochondrion 39.01 37.22
CDX87530 Canola cytosol, golgi, peroxisome, plastid 34.64 36.67
CDX99539 Canola cytosol 33.33 36.64
CDX74837 Canola mitochondrion 36.68 36.57
CDX84046 Canola cytosol 32.46 36.44
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 34.35 36.42
CDY00911 Canola mitochondrion 31.0 36.41
CDY20475 Canola endoplasmic reticulum, golgi 36.39 36.28
CDY08621 Canola mitochondrion, plastid 30.71 36.13
CDY51142 Canola cytosol 32.17 35.82
CDY44966 Canola cytosol 32.31 35.81
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 32.02 35.48
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 31.73 35.05
CDY54063 Canola mitochondrion 28.24 35.02
CDY57187 Canola cytosol 15.57 34.29
CDY18904 Canola endoplasmic reticulum 31.59 34.28
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 32.75 34.25
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 31.3 34.24
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 31.44 34.18
CDX98606 Canola vacuole 32.9 34.04
CDY61681 Canola endoplasmic reticulum, golgi 33.33 33.58
CDY68187 Canola mitochondrion 29.55 32.9
CDX78919 Canola cytosol, golgi 33.33 32.39
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 32.17 30.48
CDY72237 Canola nucleus 17.47 29.93
CDX70102 Canola cytosol 37.7 27.52
CDY27362 Canola plasma membrane 31.44 21.41
CDY33300 Canola plastid 3.64 10.46
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078DLW8EnsemblPlants:CDX90190ProteinID:CDX90190
ProteinID:CDX90190.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00150742001
PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1056InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335
TMHMM:TMhelixUniParc:UPI0004EE63CESEG:seg:::
Description
BnaA08g17940D
Coordinates
chrLK031862:-:569251..572802
Molecular Weight (calculated)
77977.3 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.531
Length
687 amino acids
Sequence
(BLAST)
001: MAMGRYSRVD GKKSSSSFGL TITIVLIVSL SLVGAWMFMS SWSAPTESID FSSSQTTTKD VETTSKSDFT NEKNEETEVV TESNQEKVEE RKEFEDKNGE
101: GDRKNEKDTD KDVFPAGDQA EITKESTTRT GSWSTQLVES QNEKKAQVSS SSTSIKWKLC NVTAGPDYIP CLDNLQAIRK LHSTKHYEHR ERHCPEEAPR
201: CLVPLPEGYK RSIKWPKSRE KIWYNNIPHT KLAQVKGHQN WVKMSGEYLT FPGGGTQFKN GALHYIDFLQ ESYPDIAWGN RTRVILDVGC GVASFGGYLF
301: DRDVLALSFA PKDEHEAQVQ FALERGIPAM SNVMGTKRLP FPGSVFDLIH CARCRVPWHI EGGKLLLELN RALRPGGFFV WSATPVYRKT EEDVGIWKAM
401: SKLTKAMCWK LMTIKTDELN EVGAAIYQKP MTNECYNERS QDEPPLCKDS DDQNAAWNVP LEACMHKVTE DSSKRGAVWP EKWPERVETA PQWLESQEGV
501: YGKPAQEDFT ADHERWKNIV SKSYLNGMGI DWSYVRNVMD MRAVYGGFAA ALKDLKLWVM NVVPIDSADT LPIIYERGLF GIYHDWCESF STYPRTYDLL
601: HADHLFSALK KRCNLVSVMA EVDRILRPQG TFIVRDDSET VGEIEKMVKS MKWNVTMTHS KGGEGLLSVQ KSWWRPTEVE TITSAIA
Best Arabidopsis Sequence Match ( AT1G29470.1 )
(BLAST)
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Arabidopsis Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.