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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07639 Canola endoplasmic reticulum 98.08 97.93
Bra000145.1-P Field mustard endoplasmic reticulum 97.93 97.64
AT2G39750.1 Thale cress endoplasmic reticulum, golgi 88.17 85.88
CDX74837 Canola mitochondrion 85.95 84.33
CDY20475 Canola endoplasmic reticulum, golgi 85.65 84.03
PGSC0003DMT400069783 Potato endoplasmic reticulum 71.89 71.68
Solyc05g052970.2.1 Tomato endoplasmic reticulum 71.3 71.09
VIT_13s0019g02250.t01 Wine grape golgi 71.89 70.85
KRG97843 Soybean endoplasmic reticulum 69.38 70.74
KRH15065 Soybean nucleus 69.23 70.48
KRH31030 Soybean endoplasmic reticulum, plasma membrane 69.67 70.3
KRH73069 Soybean endoplasmic reticulum 68.34 70.21
GSMUA_Achr5P28990_001 Banana cytosol 57.54 69.84
GSMUA_Achr9P03780_001 Banana cytosol 57.69 69.39
CDX98897 Canola golgi, mitochondrion 67.75 66.09
Zm00001d012400_P007 Maize plasma membrane 61.69 64.35
Os01t0846600-01 Rice mitochondrion 65.09 64.05
EES03874 Sorghum mitochondrion 64.94 63.81
TraesCS3D01G356400.1 Wheat endoplasmic reticulum 65.24 63.18
CDX87530 Canola cytosol, golgi, peroxisome, plastid 60.35 62.87
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 60.21 62.81
TraesCS3A01G362600.1 Wheat golgi 65.09 62.68
TraesCS3B01G395100.1 Wheat plastid 65.38 62.52
Zm00001d042883_P001 Maize mitochondrion, plastid 63.91 62.16
HORVU3Hr1G085900.1 Barley golgi, plastid 64.79 58.56
CDX70102 Canola cytosol 68.64 49.31
CDY10370 Canola cytosol 18.34 45.09
CDX85977 Canola cytosol 30.92 43.27
CDX93797 Canola cytosol 30.47 42.65
CDX86634 Canola endoplasmic reticulum, golgi 37.72 41.13
CDX89824 Canola endoplasmic reticulum, golgi 37.72 41.13
CDY15505 Canola endoplasmic reticulum, golgi 37.72 41.13
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 37.72 41.13
CDY50730 Canola cytosol 30.18 41.13
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 35.35 40.92
CDX94861 Canola endoplasmic reticulum, golgi 36.24 40.63
CDY43336 Canola cytosol 11.54 40.62
CDX92981 Canola endoplasmic reticulum, golgi 36.24 40.43
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 36.54 40.29
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 36.24 40.1
CDY70936 Canola cytosol 10.8 39.89
CDY01971 Canola endoplasmic reticulum, extracellular 24.11 39.18
CDX83493 Canola golgi 23.96 39.13
CDX70565 Canola endoplasmic reticulum 35.06 38.98
CDY70748 Canola cytosol, peroxisome 24.7 38.84
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 33.88 38.75
CDX76494 Canola endoplasmic reticulum, golgi 33.58 38.74
CDX78577 Canola endoplasmic reticulum, golgi 34.76 38.65
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 34.32 38.35
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 35.5 38.22
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 35.35 37.82
CDX84046 Canola cytosol 34.17 37.75
CDX70263 Canola plastid 32.99 37.67
CDX99540 Canola cytosol 29.88 37.62
CDY18904 Canola endoplasmic reticulum 35.21 37.6
CDY00911 Canola mitochondrion 32.4 37.44
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 38.02 37.41
CDX94256 Canola cytosol 33.88 37.0
CDY08621 Canola mitochondrion, plastid 31.95 36.99
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 32.99 36.98
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 32.99 36.98
CDY12278 Canola endoplasmic reticulum, golgi 32.69 36.83
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 32.84 36.82
CDY25257 Canola cytosol 33.73 36.77
CDY22567 Canola endoplasmic reticulum, golgi 32.54 36.67
CDY44966 Canola cytosol 33.58 36.61
CDY33299 Canola nucleus 32.54 36.42
CDX99539 Canola cytosol 33.58 36.32
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 33.28 36.29
CDY45006 Canola endoplasmic reticulum, golgi 32.4 36.2
CDY46435 Canola endoplasmic reticulum, golgi 32.25 36.15
CDY40268 Canola endoplasmic reticulum, golgi 32.4 36.14
CDX84330 Canola endoplasmic reticulum, plasma membrane 38.02 36.04
CDY16198 Canola endoplasmic reticulum, golgi 32.25 35.97
CDY54063 Canola mitochondrion 29.44 35.92
CDY57187 Canola cytosol 16.57 35.9
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 31.36 35.51
CDY24913 Canola mitochondrion 35.21 35.42
CDX74348 Canola plastid 31.21 35.34
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 34.47 35.3
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 32.25 35.05
CDX94669 Canola endoplasmic reticulum 38.76 34.98
CDY66535 Canola nucleus 33.88 34.96
CDY07198 Canola mitochondrion 30.92 34.89
CDY68187 Canola mitochondrion 31.8 34.85
CDY44314 Canola endoplasmic reticulum 38.31 34.81
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 33.58 34.55
CDX99828 Canola golgi 38.02 34.27
CDX98606 Canola vacuole 33.58 34.19
CDY51142 Canola cytosol 31.07 34.04
CDY48339 Canola cytosol 37.87 33.86
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 38.17 33.86
CDY66721 Canola golgi 26.48 33.84
CDY31339 Canola plasma membrane 38.17 33.77
CDY39830 Canola plasma membrane 38.31 33.55
CDY61681 Canola endoplasmic reticulum, golgi 33.73 33.43
CDX78919 Canola cytosol, golgi 34.02 32.53
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.72 31.91
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 34.62 30.51
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.57 30.24
CDY26666 Canola mitochondrion 31.95 30.13
CDY67390 Canola mitochondrion 31.66 29.72
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 31.51 29.38
CDY27362 Canola plasma membrane 35.21 23.59
CDY72237 Canola nucleus 11.39 19.2
CDY33300 Canola plastid 1.78 5.02
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078GI20UniProt:A0A078GI20EnsemblPlants:CDY24949
ProteinID:CDY24949ProteinID:CDY24949.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00028744001PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF789InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EC3118SEG:seg
Description
BnaC03g22230DBnaC03g22230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GI20]
Coordinates
chrLK032166:+:450345..453578
Molecular Weight (calculated)
76471.3 Da
IEP (calculated)
7.024
GRAVY (calculated)
-0.427
Length
676 amino acids
Sequence
(BLAST)
001: MKPLANADLL KSPTLIKISA LLLLTVASFY LGKHWSNDSY HQLLFFSSSS SATSGTSIPK ISISPNSNKT FNLSAIIPSN HTTTQPPNPI PIPSESNPPP
101: PPPIQSFGIV DENGAMSDDF EVGEVENVED WGNQTETVES ESDGESKPNR FRIKKFGMCP ESMREYIPCL DNADAIKKLE STERGEKFER HCLEKGNGLN
201: CLVPPPRGYR QPIPWPRSRD EVWFSNVPHT RLVEDKGGQN WISRDTKDKN KFKFPGGGTQ FIHGADQYLD QISKMVSDIT FGKHIRVAMD VGCGVASFGA
301: YLLSRDVLTM SVAPKDVHEN QIQFALERGV PAMAAAFATR RLLYPSQAFD LIHCSRCRIN WTRDDGILLL EINRMLRAGG YFAWAAQPVY KHEAALEEQW
401: TEMLNLTTSL CWKLVQKEGY IAIWQKPLNN TCYLSREAGT KQPLCDESDD PDNVWYTSLK PCISRIPENG YGGNVPSWPD RLHTPPDRLQ TITFDSYIAR
501: KELFKAESKF WNEIIGSYIR SMKWKKMKLR NVMDMKAGFG GFAAALNDHK LDCWVLNVVP ISGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDFLHASG
601: LFSVERKRCE MSTILLEMDR ILRPGGRAYI RDSIDVMDEI QEITKAMGWQ TSLRDTSEGP HASYRILTCE KRLLKA
Best Arabidopsis Sequence Match ( AT2G39750.1 )
(BLAST)
001: MKPLTNGDLF KSPTLIKISA LVFVTVAFFY LGKHWSDDGY QQLVFFSSST SGSSIPEVSV SPNSNRVFNL SAIIPTNHTQ IEIPATIRQQ PPSVVADTEK
101: VKVEANPPPP PPPSPSPPPP PGPVKSFGIV DANGVMSDDF EVGEVESDTV EDWGNQTEIV EAKSDGDSKA RVRIKKFGMC PESMREYIPC LDNTDVIKKL
201: KSTERGERFE RHCPEKGKGL NCLVPPPKGY RQPIPWPKSR DEVWFSNVPH TRLVEDKGGQ NWISRDKNKF KFPGGGTQFI HGADQYLDQM SKMVSDITFG
301: KHIRVAMDVG CGVASFGAYL LSRDVMTMSV APKDVHENQI QFALERGVPA MAAAFATRRL LYPSQAFDLI HCSRCRINWT RDDGILLLEI NRMLRAGGYF
401: AWAAQPVYKH EPALEEQWTE MLNLTISLCW KLVKKEGYVA IWQKPFNNDC YLSREAGTKP PLCDESDDPD NVWYTNLKPC ISRIPEKGYG GNVPLWPARL
501: HTPPDRLQTI KFDSYIARKE LFKAESKYWN EIIGGYVRAL KWKKMKLRNV LDMRAGFGGF AAALNDHKLD CWVLSVVPVS GPNTLPVIYD RGLLGVMHDW
601: CEPFDTYPRT YDFLHASGLF SIERKRCEMS TILLEMDRIL RPGGRAYIRD SIDVMDEIQE ITKAMGWHTS LRDTSEGPHA SYRILTCEKR LLRA
Arabidopsis Description
Probable methyltransferase PMT11 [Source:UniProtKB/Swiss-Prot;Acc:O22285]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.