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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, golgi
Any Predictor:endoplasmic reticulum, golgi, nucleus
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87530 Canola cytosol, golgi, peroxisome, plastid 96.91 96.76
AT1G77260.1 Thale cress cytosol, endoplasmic reticulum, golgi, plastid 88.73 87.79
GSMUA_Achr5P28990_001 Banana cytosol 58.33 67.86
GSMUA_Achr9P03780_001 Banana cytosol 58.18 67.08
VIT_18s0001g01600.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 67.44 65.62
KRH18054 Soybean endoplasmic reticulum, golgi 64.97 63.5
KRH16455 Soybean endoplasmic reticulum, golgi 64.66 63.48
PGSC0003DMT400059283 Potato cytosol 52.62 61.44
CDY24949 Canola endoplasmic reticulum, plasma membrane 62.81 60.21
CDY07639 Canola endoplasmic reticulum 62.65 59.97
Os01t0846600-01 Rice mitochondrion 62.96 59.39
Zm00001d012400_P007 Maize plasma membrane 58.8 58.8
CDY20475 Canola endoplasmic reticulum, golgi 62.35 58.64
CDX74837 Canola mitochondrion 61.57 57.91
CDX98897 Canola golgi, mitochondrion 61.57 57.58
EES03874 Sorghum mitochondrion 61.11 57.56
Zm00001d042883_P001 Maize mitochondrion, plastid 60.96 56.83
TraesCS3D01G356400.1 Wheat endoplasmic reticulum 61.11 56.73
TraesCS3A01G362600.1 Wheat golgi 60.8 56.13
TraesCS3B01G395100.1 Wheat plastid 60.96 55.87
Solyc04g058180.2.1 Tomato plastid 55.25 55.42
HORVU3Hr1G085900.1 Barley golgi, plastid 61.27 53.07
CDX70102 Canola cytosol 62.04 42.72
CDY50730 Canola cytosol 31.94 41.73
CDX94861 Canola endoplasmic reticulum, golgi 38.58 41.46
CDX89824 Canola endoplasmic reticulum, golgi 39.66 41.45
CDX92981 Canola endoplasmic reticulum, golgi 38.73 41.42
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 39.51 41.29
CDX86634 Canola endoplasmic reticulum, golgi 39.35 41.13
CDY15505 Canola endoplasmic reticulum, golgi 39.35 41.13
CDY10370 Canola cytosol 17.44 41.09
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 38.73 40.95
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 38.27 40.59
CDX83493 Canola golgi 25.93 40.58
CDX85977 Canola cytosol 29.78 39.96
CDX70565 Canola endoplasmic reticulum 37.19 39.64
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 35.49 39.38
CDX78577 Canola endoplasmic reticulum, golgi 36.88 39.31
CDX93797 Canola cytosol 29.01 38.92
CDY57187 Canola cytosol 18.36 38.14
CDY70748 Canola cytosol, peroxisome 25.0 37.67
CDY01971 Canola endoplasmic reticulum, extracellular 24.07 37.5
CDY43336 Canola cytosol 11.11 37.5
CDY40268 Canola endoplasmic reticulum, golgi 34.88 37.29
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 34.72 37.19
CDY70936 Canola cytosol 10.49 37.16
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 35.65 36.78
CDY16198 Canola endoplasmic reticulum, golgi 34.26 36.63
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 33.33 36.55
CDY45006 Canola endoplasmic reticulum, golgi 34.1 36.53
CDY46435 Canola endoplasmic reticulum, golgi 33.95 36.48
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 35.34 36.23
CDX76494 Canola endoplasmic reticulum, golgi 32.72 36.18
CDY18904 Canola endoplasmic reticulum 35.34 36.18
CDY68187 Canola mitochondrion 34.41 36.14
CDY54063 Canola mitochondrion 30.86 36.1
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 33.18 36.01
CDX74348 Canola plastid 33.02 35.85
CDY22567 Canola endoplasmic reticulum, golgi 33.18 35.83
CDY12278 Canola endoplasmic reticulum, golgi 33.02 35.67
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 33.18 35.66
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 33.18 35.66
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 33.02 35.49
CDY00911 Canola mitochondrion 31.94 35.38
CDX99540 Canola cytosol 29.32 35.38
CDX70263 Canola plastid 32.25 35.3
CDY33299 Canola nucleus 32.87 35.26
CDY07198 Canola mitochondrion 32.56 35.23
CDY25257 Canola cytosol 33.64 35.16
CDX94256 Canola cytosol 33.49 35.06
CDX84046 Canola cytosol 33.02 34.97
CDY08621 Canola mitochondrion, plastid 31.48 34.93
CDY44966 Canola cytosol 33.18 34.68
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 33.18 34.57
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 35.03 34.39
CDY51142 Canola cytosol 32.72 34.36
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 32.87 34.35
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 36.42 34.35
CDX99539 Canola cytosol 33.02 34.24
CDY24913 Canola mitochondrion 35.19 33.93
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.19 33.8
CDY66535 Canola nucleus 33.8 33.44
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 33.18 32.72
CDY31339 Canola plasma membrane 38.27 32.46
CDX98606 Canola vacuole 33.18 32.38
CDY39830 Canola plasma membrane 38.43 32.25
CDY44314 Canola endoplasmic reticulum 36.88 32.12
CDX99828 Canola golgi 37.04 32.0
CDX94669 Canola endoplasmic reticulum 36.73 31.78
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.35 31.76
CDY61681 Canola endoplasmic reticulum, golgi 33.33 31.67
CDY48339 Canola cytosol 36.88 31.61
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 38.43 31.16
CDY66721 Canola golgi 25.0 30.62
CDX78919 Canola cytosol, golgi 33.33 30.55
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 38.58 29.76
CDY26666 Canola mitochondrion 32.72 29.57
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 32.72 29.24
CDY67390 Canola mitochondrion 32.41 29.17
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 34.26 28.94
CDY27362 Canola plasma membrane 36.11 23.19
CDY72237 Canola nucleus 11.27 18.2
CDY33300 Canola plastid 1.08 2.93
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078DIJ7EnsemblPlants:CDX88354ProteinID:CDX88354
ProteinID:CDX88354.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00147876001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF979InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EEBBD9SEG:seg:
Description
BnaC06g37980D
Coordinates
chrLK031855:-:519506..522876
Molecular Weight (calculated)
73139.8 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.324
Length
648 amino acids
Sequence
(BLAST)
001: MKLSDVGLDA VKTPRLVKVI AFALISITTI FLFNHFSDSF SYPSLVSSPE ALQTNATTVS AVPPSPPPRP RLKISPPPLP PTVVRTGIID ENGAMSDTFE
101: IGGFDPDAVD EIKTGNSSSS SEATGDSKAA FRIEKLSVCD KRKTDHIPCL DNEEEIKRLN STDRGENYER HCPKERLGCL IPPPDGYKKP IPWPQSRDKI
201: WFNNVPHTRL VEDKGGQNWI RREKDKFVFP GGGTQFIHGA DQYLDQISQM VPGITFGVST RAALDIGCGV ASFGAFLMQR NTTTLSVAPK DVHENQIQFA
301: LERGVPAMVA VFATRRLLYP SQAFEMIHCS RCRINWTRDD GILLLEANRM LRAGGYFVWA AQPVYKHEDN LQEQWKEMVD LTSRICWELI KKEGYIAVWR
401: KPLNNSCYLN REAGAKPPLC RPDDDPDDVW YVDMKPCITR LPETGYGANV SPWPARLHDP PERLQSIQMD AYISRKEIMK AESRFWFETV ESYVRVFRWK
501: EFKLRNVLDM KAGFGGFAAA LNDLGLDCWV MNVVPISGFN TLPVIYDRGL VGTMHDWCEP FDTYPRTYDL IHAAFLLSNE KKRCNITNIM VEMDRMLRPG
601: GRVYIRDSLS LMDQLKQIAT AIGWRAGVHD TGEGPHASVR ILICDKGI
Best Arabidopsis Sequence Match ( AT1G77260.1 )
(BLAST)
001: MKLSDVGLDV VKTPRLVKLI AFAFLSISTI FLFNHFSDSF SYPSLPFPIS SSSNVTEAIQ TNITSVAAVA PSPPPRPRLK ISPPPLPPTV VRTGIINENG
101: AMSDSFEIGG FDPDSIDELK SATGNSSVEE KESPEVGFQI EKLKLCDKTK IDYIPCLDNE EEIKRLNNTD RGENYERHCP KQSLDCLIPP PDGYKKPIQW
201: PQSRDKIWFN NVPHTRLVED KGGQNWIRRE KDKFVFPGGG TQFIHGADQY LDQISQMIPD ITFGSRTRVA LDIGCGVASF GAFLMQRNTT TLSVAPKDVH
301: ENQIQFALER GVPAMVAVFA TRRLLYPSQS FEMIHCSRCR INWTRDDGIL LLEVNRMLRA GGYFVWAAQP VYKHEDNLQE QWKEMLDLTN RICWELIKKE
401: GYIAVWRKPL NNSCYVSREA GTKPPLCRPD DDPDDVWYVD MKPCITRLPD NGYGANVSTW PARLHDPPER LQSIQMDAYI SRKEIMKAES RFWLEVVESY
501: VRVFRWKEFK LRNVLDMRAG FGGFAAALND LGLDCWVMNI VPVSGFNTLP VIYDRGLQGA MHDWCEPFDT YPRTYDLIHA AFLFSVEKKR CNITNIMLEM
601: DRMLRPGGHV YIRDSLSLMD QLQQVAKAIG WTAGVHDTGE GPHASVRILI CDKRI
Arabidopsis Description
Probable methyltransferase PMT10 [Source:UniProtKB/Swiss-Prot;Acc:Q94KE1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.