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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009158.1-P Field mustard cytosol 95.11 93.82
CDX98897 Canola golgi, mitochondrion 68.12 92.5
AT5G06050.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 63.23 87.24
CDY24949 Canola endoplasmic reticulum, plasma membrane 49.31 68.64
GSMUA_Achr5P28990_001 Banana cytosol 40.49 68.4
CDY07639 Canola endoplasmic reticulum 48.99 68.09
KRG97843 Soybean endoplasmic reticulum 47.93 68.02
PGSC0003DMT400069783 Potato endoplasmic reticulum 48.88 67.85
VIT_13s0019g02250.t01 Wine grape golgi 49.31 67.64
KRH31030 Soybean endoplasmic reticulum, plasma membrane 47.82 67.16
Solyc05g052970.2.1 Tomato endoplasmic reticulum 48.25 66.96
GSMUA_Achr9P03780_001 Banana cytosol 39.53 66.19
CDX74837 Canola mitochondrion 48.46 66.18
CDY20475 Canola endoplasmic reticulum, golgi 48.46 66.18
KRH15065 Soybean nucleus 46.44 65.81
KRH73069 Soybean endoplasmic reticulum 46.01 65.81
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 42.72 62.04
CDX87530 Canola cytosol, golgi, peroxisome, plastid 42.61 61.79
Zm00001d012400_P007 Maize plasma membrane 42.51 61.73
Os01t0846600-01 Rice mitochondrion 45.06 61.72
EES03874 Sorghum mitochondrion 45.06 61.63
Zm00001d042883_P001 Maize mitochondrion, plastid 44.31 60.0
TraesCS3D01G356400.1 Wheat endoplasmic reticulum 44.21 59.6
TraesCS3A01G362600.1 Wheat golgi 44.21 59.26
TraesCS3B01G395100.1 Wheat plastid 44.42 59.12
HORVU3Hr1G085900.1 Barley golgi, plastid 44.63 56.15
CDY43336 Canola cytosol 8.93 43.75
CDX85977 Canola cytosol 22.42 43.69
CDY50730 Canola cytosol 22.85 43.35
CDX93797 Canola cytosol 22.0 42.86
CDY10370 Canola cytosol 12.33 42.18
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 25.61 41.27
CDX94861 Canola endoplasmic reticulum, golgi 26.25 40.96
CDX92981 Canola endoplasmic reticulum, golgi 26.25 40.76
CDX89824 Canola endoplasmic reticulum, golgi 26.67 40.48
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 26.67 40.48
CDY70936 Canola cytosol 7.86 40.44
CDX83493 Canola golgi 17.75 40.34
CDX86634 Canola endoplasmic reticulum, golgi 26.46 40.16
CDY15505 Canola endoplasmic reticulum, golgi 26.46 40.16
CDX70565 Canola endoplasmic reticulum 25.93 40.13
CDX78577 Canola endoplasmic reticulum, golgi 25.93 40.13
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 26.14 40.13
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 25.82 39.77
CDY70748 Canola cytosol, peroxisome 17.96 39.3
CDY40268 Canola endoplasmic reticulum, golgi 25.19 39.11
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 25.08 39.01
CDY45006 Canola endoplasmic reticulum, golgi 24.97 38.84
CDY46435 Canola endoplasmic reticulum, golgi 24.87 38.81
CDY01971 Canola endoplasmic reticulum, extracellular 17.11 38.7
CDY16198 Canola endoplasmic reticulum, golgi 24.87 38.61
CDX70263 Canola plastid 24.23 38.51
CDY33299 Canola nucleus 24.44 38.08
CDX76494 Canola endoplasmic reticulum, golgi 23.59 37.88
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 25.19 37.74
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 27.52 37.7
CDX84046 Canola cytosol 24.44 37.58
CDY44966 Canola cytosol 24.55 37.26
CDX99540 Canola cytosol 21.25 37.24
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 23.38 37.23
CDY12278 Canola endoplasmic reticulum, golgi 23.7 37.17
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 24.44 37.1
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 24.44 36.98
CDY18904 Canola endoplasmic reticulum 24.87 36.97
CDY57187 Canola cytosol 12.22 36.86
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 23.38 36.85
CDY22567 Canola endoplasmic reticulum, golgi 23.49 36.83
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 24.65 36.71
CDX94256 Canola cytosol 24.12 36.67
CDY54063 Canola mitochondrion 21.57 36.64
CDY25257 Canola cytosol 24.12 36.61
CDX74348 Canola plastid 23.17 36.52
CDX84330 Canola endoplasmic reticulum, plasma membrane 27.63 36.47
CDY00911 Canola mitochondrion 22.64 36.41
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 23.27 36.32
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 23.27 36.32
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 23.17 36.15
CDY08621 Canola mitochondrion, plastid 22.42 36.13
CDX99539 Canola cytosol 23.91 36.0
CDY07198 Canola mitochondrion 22.85 35.89
CDY24913 Canola mitochondrion 25.61 35.86
CDY68187 Canola mitochondrion 23.49 35.82
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 24.97 35.61
CDY66535 Canola nucleus 24.76 35.57
CDY44314 Canola endoplasmic reticulum 27.95 35.35
CDX94669 Canola endoplasmic reticulum 27.95 35.11
CDY51142 Canola cytosol 22.85 34.85
CDY31339 Canola plasma membrane 28.06 34.55
CDY39830 Canola plasma membrane 28.27 34.46
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 27.84 34.38
CDX99828 Canola golgi 27.31 34.27
CDY48339 Canola cytosol 27.31 33.99
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 23.59 33.79
CDY66721 Canola golgi 18.81 33.46
CDX98606 Canola vacuole 23.49 33.28
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 28.16 33.17
CDY61681 Canola endoplasmic reticulum, golgi 23.49 32.4
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 26.25 32.2
CDX78919 Canola cytosol, golgi 23.7 31.54
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 28.06 31.43
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 24.12 31.31
CDY26666 Canola mitochondrion 23.8 31.24
CDY67390 Canola mitochondrion 23.7 30.97
CDY27362 Canola plasma membrane 25.08 23.39
CDY72237 Canola nucleus 7.97 18.7
CDY33300 Canola plastid 1.49 5.86
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-MapMan:17.4.1.3.7Gene3D:3.30.70.330Gene3D:3.40.50.150GO:A0A078C069EnsemblPlants:CDX70102
ProteinID:CDX70102ProteinID:CDX70102.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003743
GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005852GO:GO:0006412GO:GO:0008135GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00136211001InterPro:IPR000504
InterPro:IPR012677HAMAP:MF_03006InterPro:Nucleotide-bd_a/b_plait_sfPFAM:PF00076PFAM:PF03141PFAM:PF12353
PFscan:PS50102PANTHER:PTHR10108PANTHER:PTHR10108:SF789InterPro:Put_SAM_MeTrfaseInterPro:RBD_domain_sfInterPro:RRM_dom
InterPro:SAM-dependent_MTasesSMART:SM00360SUPFAM:SSF53335SUPFAM:SSF54928UniParc:UPI0004EEE1ACInterPro:eIF3G_RRM
InterPro:eIF3_gInterPro:eIF3g_NSEG:seg:::
Description
BnaA10g24510D
Coordinates
chrLK031790:-:3156717..3161821
Molecular Weight (calculated)
106966.0 Da
IEP (calculated)
6.481
GRAVY (calculated)
-0.437
Length
941 amino acids
Sequence
(BLAST)
001: MASMMQRTNN FQWGDIEEDD DDLDILLPQV IGPDENGIKK VIEYRLNEEG RRVKITTTTR VEKLLLSQRA AERRSWPKFG DAAREEAGLH LTVRSTEDIH
101: LERGSQAEEA TTSGDSMHQE GGVLMVCRVC RMRGDHWTAR CPQRDLLSLM ETPLTTTEAS TSTEVYVPPS MRTGADMRRR RNDDNSVRVA NLSEDTREQD
201: LMELFHPFGA VIRAYVAIDK NTNTSRGFGF VNFVSREDAQ RAISTLNGYG YDNLILRVEW ATPRPRGNLL RSSSFFKISI FVLISVACFF LGKHWSDDGF
301: RRLVFFSSEP SRSPIVSLSP DLGKTYNISD LIHKSHPIPP VPLTPPPPPS SVDLHVFGIV DENGTMSDEF QVGDYDAEAA ESSGNETESE PTTIARVSVG
401: RIEVCSEVMT DYIPCLDNEE AIKRLESTER GERFERHCPK EGTGLNCTVP VPNGYRPPIP WPKSRDEVWF NNVPHTRLVE DKGGQNWISK ENDKFKFPGG
501: GTQFIHGADQ YLDQISQMIP DISFGNHTRV VLDIGCGVAS FGAYLMSRDV LTMSIAPKDV HENQIQFALE RGVPAMVAAF TTRRLLYPSQ AFDLVHCSRC
601: RINWTRDDGI LLLEVNRMLR AGGYFVWAAQ PVYKHEKALE EQWEEMLNLT TRLCWVLVKK EGYIAIWQKP TNNTCYLSRD AGIIPPLCNP EDDPDSVWYV
701: NLKACITRIE DNGYGANLAP WPSRLQTPPD RLQTIQIDSY IARKELFMAE YKYWKEIISN YVNALHWKQI GLRNVMDMRA GFGGFAAALA ELKVDCWVLN
801: VVPVSGANTL PVIYDRGLLG VMHDWCEPFD TYPRTYDLLH AAGLFSIERK RCNMTTIMLE MDRILRPGGR VYIRDTINVM SELQEIGNAM RWHTTLRETA
901: EGPHASYRVL LCEKKFENKV ESSVDKHPAK KKRRKSKGKR H
Best Arabidopsis Sequence Match ( AT5G06050.1 )
(BLAST)
001: MKLFLNSNLL RNSIFFKISA FVLISVACFF LGKHWSEDGF RRLIFFSAEP SRSPIVALSP DFGKTYNISG LIYESHPILP PSLSPPPPPD SVELKVFGIV
101: NENGTMSDEF QIGDYDVESA ETLGNQTEFE SSDDDDIKST TARVSVRKFE ICSENMTEYI PCLDNVEAIK RLNSTARGER FERNCPNDGM GLNCTVPIPQ
201: GYRSPIPWPR SRDEVWFNNV PHTKLVEDKG GQNWIYKEND KFKFPGGGTQ FIHGADQYLD QISQMIPDIS FGNHTRVVLD IGCGVASFGA YLMSRNVLTM
301: SIAPKDVHEN QIQFALERGV PAMVAAFTTR RLLYPSQAFD LVHCSRCRIN WTRDDGILLL EVNRMLRAGG YFVWAAQPVY KHEKALEEQW EEMLNLTTRL
401: CWVLVKKEGY IAIWQKPVNN TCYLSRGAGV SPPLCNSEDD PDNVWYVDLK ACITRIEENG YGANLAPWPA RLLTPPDRLQ TIQIDSYIAR KELFVAESKY
501: WKEIISNYVN ALHWKQIGLR NVLDMRAGFG GFAAALAELK VDCWVLNVIP VSGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDLLHAAG LFSIERKRCN
601: MTTMMLEMDR ILRPGGRVYI RDTINVTSEL QEIGNAMRWH TSLRETAEGP HSSYRVLLCE KRFESSEKRR TKKRRKTKGK RA
Arabidopsis Description
Probable methyltransferase PMT12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG39]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.