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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • endoplasmic reticulum 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99539 Canola cytosol 100.0 85.92
Bra037916.1-P Field mustard cytosol 99.63 85.6
CDX94256 Canola cytosol 91.06 79.0
CDY25257 Canola cytosol 90.88 78.71
AT4G10440.1 Thale cress cytosol, endoplasmic reticulum, mitochondrion, nucleus 92.18 78.2
CDX85977 Canola cytosol 63.31 70.39
CDX93797 Canola cytosol 62.94 69.98
CDX84046 Canola cytosol 79.33 69.61
CDY44966 Canola cytosol 79.14 68.55
VIT_02s0025g03200.t01 Wine grape cytosol 71.51 60.76
KRH60099 Soybean cytosol 69.65 60.03
PGSC0003DMT400014851 Potato cytosol 69.65 59.94
Solyc08g013740.2.1 Tomato unclear 69.65 59.27
KRH41379 Soybean cytosol 68.9 58.82
GSMUA_Achr4P29040_001 Banana cytosol, golgi, mitochondrion, peroxisome 66.48 58.81
CDY70936 Canola cytosol 19.74 57.92
GSMUA_Achr4P24710_001 Banana cytosol 54.93 57.73
GSMUA_Achr1P11480_001 Banana cytosol 65.92 57.47
Os10t0510400-01 Rice golgi, plasma membrane 67.04 56.78
GSMUA_Achr9P19890_001 Banana cytosol 46.74 55.78
Os06t0103900-01 Rice cytosol, golgi, mitochondrion, plastid 64.99 55.31
EER93951 Sorghum peroxisome 65.18 54.95
TraesCS6D01G025000.1 Wheat cytosol 64.06 54.52
EER89033 Sorghum cytosol 62.94 54.52
TraesCS6A01G021300.1 Wheat cytosol 63.87 54.36
TraesCS6B01G029000.1 Wheat cytosol 63.69 54.2
CDY54063 Canola mitochondrion 55.31 53.61
TraesCS4A01G458400.1 Wheat endoplasmic reticulum, golgi 62.76 53.58
TraesCS7D01G027500.1 Wheat endoplasmic reticulum, golgi 62.76 53.58
Zm00001d035876_P002 Maize cytosol 61.83 53.55
TraesCS7A01G031100.1 Wheat endoplasmic reticulum, golgi 62.38 53.26
GSMUA_Achr1P04180_001 Banana cytosol 59.4 52.73
CDY50730 Canola cytosol 46.74 50.6
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 59.03 50.16
CDY18904 Canola endoplasmic reticulum 59.03 50.08
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 56.98 48.73
HORVU7Hr1G003860.2 Barley plasma membrane 64.06 48.59
CDY01971 Canola endoplasmic reticulum, extracellular 37.43 48.32
Zm00001d032476_P001 Maize cytosol, endoplasmic reticulum, mitochondrion, peroxisome 43.2 47.93
CDY40268 Canola endoplasmic reticulum, golgi 53.63 47.52
CDY46435 Canola endoplasmic reticulum, golgi 53.07 47.26
CDY16198 Canola endoplasmic reticulum, golgi 53.26 47.19
CDY45006 Canola endoplasmic reticulum, golgi 52.89 46.94
HORVU6Hr1G003900.3 Barley cytosol 64.43 46.57
CDY70748 Canola cytosol, peroxisome 37.24 46.51
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 53.45 46.29
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 52.7 45.5
CDX83493 Canola golgi 32.77 42.51
CDY57187 Canola cytosol 23.09 39.74
CDY12278 Canola endoplasmic reticulum, golgi 43.76 39.17
CDY22567 Canola endoplasmic reticulum, golgi 43.76 39.17
CDX76494 Canola endoplasmic reticulum, golgi 42.64 39.08
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 52.33 38.76
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 43.39 38.64
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 43.39 38.64
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 43.39 38.64
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 42.27 38.41
CDY68187 Canola mitochondrion 43.95 38.25
CDY10370 Canola cytosol 19.55 38.18
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.04 36.01
CDX74348 Canola plastid 39.85 35.85
CDY07198 Canola mitochondrion 39.85 35.73
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 42.83 35.01
CDY51142 Canola cytosol 39.85 34.68
CDX98606 Canola vacuole 42.64 34.49
CDX70565 Canola endoplasmic reticulum 38.55 34.05
CDX78577 Canola endoplasmic reticulum, golgi 38.36 33.88
CDY61681 Canola endoplasmic reticulum, golgi 42.83 33.72
CDX94861 Canola endoplasmic reticulum, golgi 37.8 33.66
CDX92981 Canola endoplasmic reticulum, golgi 37.99 33.66
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 37.99 33.28
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 37.62 33.06
CDX89824 Canola endoplasmic reticulum, golgi 37.99 32.9
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 37.8 32.74
CDX78919 Canola cytosol, golgi 43.02 32.67
CDX86634 Canola endoplasmic reticulum, golgi 37.62 32.58
CDY15505 Canola endoplasmic reticulum, golgi 37.62 32.58
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 34.82 32.02
CDY27362 Canola plasma membrane 57.54 30.62
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 34.45 30.58
CDY00911 Canola mitochondrion 33.15 30.43
CDX70263 Canola plastid 33.33 30.24
CDY08621 Canola mitochondrion, plastid 32.77 30.14
CDY24949 Canola endoplasmic reticulum, plasma membrane 37.62 29.88
CDY07639 Canola endoplasmic reticulum 37.62 29.84
CDX87530 Canola cytosol, golgi, peroxisome, plastid 35.75 29.58
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.8 29.55
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 35.38 29.32
CDY33299 Canola nucleus 32.59 28.97
CDX74837 Canola mitochondrion 37.06 28.88
CDX98897 Canola golgi, mitochondrion 37.06 28.72
CDY43336 Canola cytosol 10.24 28.65
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.99 28.61
CDY66721 Canola golgi 27.93 28.36
CDY20475 Canola endoplasmic reticulum, golgi 36.31 28.3
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 34.45 28.03
CDY24913 Canola mitochondrion 35.01 27.98
CDY44314 Canola endoplasmic reticulum 38.17 27.55
CDX94669 Canola endoplasmic reticulum 38.36 27.5
CDX99828 Canola golgi 37.99 27.2
CDY48339 Canola cytosol 38.17 27.12
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.99 26.77
CDY66535 Canola nucleus 32.03 26.26
CDY31339 Canola plasma membrane 36.87 25.92
CDY39830 Canola plasma membrane 36.69 25.52
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 36.69 24.66
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 34.26 23.99
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 36.69 23.45
CDY26666 Canola mitochondrion 31.1 23.29
CDY67390 Canola mitochondrion 31.1 23.19
CDX70102 Canola cytosol 37.24 21.25
CDY72237 Canola nucleus 11.17 14.96
CDY33300 Canola plastid 1.68 3.77
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078EBW2EnsemblPlants:CDX99540ProteinID:CDX99540
ProteinID:CDX99540.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00107971001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1052InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EF2948SEG:seg:
Description
BnaC09g24520D
Coordinates
chrLK031911:-:669461..671325
Molecular Weight (calculated)
61399.1 Da
IEP (calculated)
8.065
GRAVY (calculated)
-0.539
Length
537 amino acids
Sequence
(BLAST)
001: MAKENTGQHQ QTEARRKKLT LILGVSGLCI LFYILGAWQN NNVPASYSKM GCETKSNPSS STSSSSSESL DFKSHNQDEF KETNQTIKYF EPCDLSLSEY
101: TPCEDRQRGR KFDRNMLKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYGNIP HKELSVEKAV QNWIQVEGDR FRFPGGGTMF PRGADAYIDD
201: IARLIPLTNG GIRTAIDTGC GVASFGAYLL KRDIMAVSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH CSRCLIPWFK NDGLYLMEVD
301: RVLRPGGYWI LSGPPINWKQ YWREQDSIED VAKSLCWKKV IEKGDLSIWQ KPINHIECKK LKQNNKSPPI CSSSDNADSA WYKDLEPCVT PLPNTNNPEE
401: SAGGALEDWP DRAFAVPPRI IRGTIQDINT EMFREDNEVW KERIAHYKKI VPELSRGRFR NIMDMNAYLG GFAASMLKYP SWVMNVVPVH AEKQTLGVIY
501: ERGLIGTYQD WCEGFSTYPR TYDMIHAGGL FTLYDNR
Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.