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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 1
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033172.1-P Field mustard cytosol 99.35 99.19
CDY25257 Canola cytosol 99.35 99.19
CDY70936 Canola cytosol 27.14 91.8
CDX99540 Canola cytosol 79.0 91.06
CDX99539 Canola cytosol 91.92 91.04
AT4G10440.1 Thale cress cytosol, endoplasmic reticulum, mitochondrion, nucleus 91.6 89.57
CDX85977 Canola cytosol 64.78 83.02
CDX93797 Canola cytosol 64.46 82.61
CDX84046 Canola cytosol 78.19 79.08
CDY44966 Canola cytosol 77.87 77.74
GSMUA_Achr4P24710_001 Banana cytosol 57.35 69.47
GSMUA_Achr4P29040_001 Banana cytosol, golgi, mitochondrion, peroxisome 67.37 68.7
GSMUA_Achr9P19890_001 Banana cytosol 49.92 68.67
PGSC0003DMT400014851 Potato cytosol 69.14 68.59
VIT_02s0025g03200.t01 Wine grape cytosol 69.63 68.2
KRH60099 Soybean cytosol 68.01 67.58
Solyc08g013740.2.1 Tomato unclear 68.5 67.19
KRH41379 Soybean cytosol 67.85 66.77
GSMUA_Achr1P11480_001 Banana cytosol 65.11 65.42
Os10t0510400-01 Rice golgi, plasma membrane 66.24 64.67
Os06t0103900-01 Rice cytosol, golgi, mitochondrion, plastid 65.91 64.66
EER89033 Sorghum cytosol 63.97 63.87
TraesCS6D01G025000.1 Wheat cytosol 65.11 63.87
TraesCS6B01G029000.1 Wheat cytosol 64.94 63.71
TraesCS6A01G021300.1 Wheat cytosol 64.62 63.39
GSMUA_Achr1P04180_001 Banana cytosol 61.71 63.14
TraesCS4A01G458400.1 Wheat endoplasmic reticulum, golgi 63.65 62.64
TraesCS7A01G031100.1 Wheat endoplasmic reticulum, golgi 63.65 62.64
TraesCS7D01G027500.1 Wheat endoplasmic reticulum, golgi 63.65 62.64
EER93951 Sorghum peroxisome 64.14 62.32
Zm00001d035876_P002 Maize cytosol 62.36 62.26
CDY50730 Canola cytosol 48.3 60.28
CDY01971 Canola endoplasmic reticulum, extracellular 40.06 59.62
CDY70748 Canola cytosol, peroxisome 40.71 58.6
Zm00001d032476_P001 Maize cytosol, endoplasmic reticulum, mitochondrion, peroxisome 44.75 57.23
CDY18904 Canola endoplasmic reticulum 58.32 57.03
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 57.84 56.65
HORVU7Hr1G003860.2 Barley plasma membrane 63.97 55.93
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 56.54 55.73
CDY54063 Canola mitochondrion 49.43 55.23
CDY46435 Canola endoplasmic reticulum, golgi 53.8 55.22
CDY40268 Canola endoplasmic reticulum, golgi 53.96 55.12
CDY45006 Canola endoplasmic reticulum, golgi 53.63 54.88
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 54.93 54.84
CDY16198 Canola endoplasmic reticulum, golgi 53.63 54.79
HORVU6Hr1G003900.3 Barley cytosol 65.11 54.24
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 53.8 53.54
CDY57187 Canola cytosol 25.04 49.68
CDX83493 Canola golgi 33.12 49.52
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 53.63 45.79
CDY12278 Canola endoplasmic reticulum, golgi 42.65 44.0
CDY22567 Canola endoplasmic reticulum, golgi 42.65 44.0
CDY43336 Canola cytosol 13.57 43.75
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 42.49 43.62
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 42.49 43.62
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 42.33 43.45
CDX76494 Canola endoplasmic reticulum, golgi 40.06 42.32
CDY68187 Canola mitochondrion 41.84 41.98
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 39.74 41.62
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.9 41.37
CDX74348 Canola plastid 39.74 41.21
CDY07198 Canola mitochondrion 39.42 40.73
CDY51142 Canola cytosol 39.9 40.03
CDY10370 Canola cytosol 17.29 38.91
CDX70565 Canola endoplasmic reticulum 37.16 37.83
CDX94861 Canola endoplasmic reticulum, golgi 36.83 37.81
CDX92981 Canola endoplasmic reticulum, golgi 37.0 37.79
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 40.06 37.75
CDX78577 Canola endoplasmic reticulum, golgi 37.0 37.66
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 37.16 37.52
CDX98606 Canola vacuole 40.06 37.35
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 36.67 37.15
CDX89824 Canola endoplasmic reticulum, golgi 36.83 36.77
CDX86634 Canola endoplasmic reticulum, golgi 36.51 36.45
CDY15505 Canola endoplasmic reticulum, golgi 36.51 36.45
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 36.35 36.29
CDY61681 Canola endoplasmic reticulum, golgi 39.9 36.22
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 33.93 35.96
CDX78919 Canola cytosol, golgi 40.23 35.22
CDY27362 Canola plasma membrane 57.03 34.99
CDY08621 Canola mitochondrion, plastid 32.31 34.25
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 33.44 34.21
CDY00911 Canola mitochondrion 32.31 34.19
CDX70263 Canola plastid 32.63 34.12
CDY24949 Canola endoplasmic reticulum, plasma membrane 37.0 33.88
CDX87530 Canola cytosol, golgi, peroxisome, plastid 35.38 33.74
CDY07639 Canola endoplasmic reticulum 36.83 33.68
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.32 33.62
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 35.06 33.49
CDX74837 Canola mitochondrion 36.67 32.95
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.8 32.82
CDX98897 Canola golgi, mitochondrion 36.51 32.61
CDY20475 Canola endoplasmic reticulum, golgi 35.86 32.22
CDY33299 Canola nucleus 31.18 31.95
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 33.76 31.67
CDY24913 Canola mitochondrion 33.93 31.25
CDY44314 Canola endoplasmic reticulum 37.48 31.18
CDX94669 Canola endoplasmic reticulum 37.48 30.97
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.8 30.71
CDX99828 Canola golgi 37.0 30.53
CDY48339 Canola cytosol 37.16 30.42
CDY31339 Canola plasma membrane 36.67 29.71
CDY66535 Canola nucleus 31.02 29.31
CDY39830 Canola plasma membrane 36.51 29.27
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 36.51 28.29
CDY66721 Canola golgi 23.91 27.98
CDY26666 Canola mitochondrion 31.18 26.92
CDY67390 Canola mitochondrion 31.18 26.81
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 36.35 26.79
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 32.96 26.6
CDX70102 Canola cytosol 36.67 24.12
CDY72237 Canola nucleus 9.53 14.71
CDY33300 Canola plastid 1.45 3.77
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078DYI1EnsemblPlants:CDX94256ProteinID:CDX94256
ProteinID:CDX94256.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00157253001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1052InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EE14FC::
Description
BnaC02g29160D
Coordinates
chrLK031880:+:543106..545307
Molecular Weight (calculated)
71171.9 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.531
Length
619 amino acids
Sequence
(BLAST)
001: MAKDNTGLHH QTEARRKKLT LVLGVSGLCI LFYVLGAWQT SNVPASYSKI GCETQSNPSS ESADLDFKSH NQFEFKETNL TIKNFEPCDL SLSEYTPCED
101: RQRGRRFDRN MMKYRERHCP SKDELLYCLI PPPPNYKIPF KWPQSRDYAW YDNIPHRELS VEKAVQNWIQ VEGDRFRFPG GGTMFPRGAD AYIDDIARLI
201: PLTAGGIRTA IDTGCGVASF GAYLLKRDIM AVSFAPRDTH EAQVQFALER GVPAIIGIMG SKRLPYPARA FDLAHCSRCL IPWFKNEGLY LMEVDRVLRP
301: GGYWILSGPP INWKQYWRGW ERTEEDLKKE QDSIEDVAKS LCWKKVIEKG DLAIWRKPIN HIECKKLKQN NKSPPLCTSD NNADFAWYKD LESCITPLPE
401: TNNPEESSDG ALEDWPDRAF AVPPRIIRGT IQDINAEKFR EDNEVWKERI AYYKKIVPEI SHGRFRNIMD MNAYLGGFAA SMLKYPSWVM NVVPVDAEKQ
501: TLGVIYERGL IGTYQDWCEG FSTYPRTYDM IHAGGLFSLY ENKCDLTFIL LEMDRILRPE GTVVMRDNVE TLTKVERIAK GMKWNTQIVD HEKGPYNPEK
601: ILVAVKTYWT GQPSNNNNN
Best Arabidopsis Sequence Match ( AT4G10440.1 )
(BLAST)
001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN
Arabidopsis Description
Probable methyltransferase PMT17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX8]
SUBAcon: [mitochondrion,endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.