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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46435 Canola endoplasmic reticulum, golgi 97.52 97.84
CDY50730 Canola cytosol 78.68 95.97
CDY16198 Canola endoplasmic reticulum, golgi 94.88 94.72
CDY40268 Canola endoplasmic reticulum, golgi 94.21 94.06
AT1G26850.2 Thale cress endoplasmic reticulum, golgi 94.21 92.53
KRH74853 Soybean endoplasmic reticulum, golgi 78.35 78.09
KRG99086 Soybean endoplasmic reticulum 78.35 77.96
KRH70718 Soybean endoplasmic reticulum 77.85 77.59
KRH45909 Soybean endoplasmic reticulum 77.85 77.47
PGSC0003DMT400016774 Potato endoplasmic reticulum, golgi 77.02 76.14
Solyc01g010870.2.1 Tomato nucleus, unclear 76.36 76.11
Solyc05g007490.2.1 Tomato nucleus, plastid, unclear 75.87 75.0
PGSC0003DMT400080300 Potato endoplasmic reticulum, golgi 75.54 74.67
GSMUA_Achr3P01520_001 Banana endoplasmic reticulum, golgi 72.73 74.58
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi 75.37 73.91
VIT_01s0026g02340.t01 Wine grape golgi 77.69 73.9
GSMUA_Achr3P20050_001 Banana endoplasmic reticulum, golgi 71.74 73.56
GSMUA_Achr8P16940_001 Banana endoplasmic reticulum, golgi 43.14 73.11
TraesCS5A01G226900.1 Wheat golgi 73.72 72.64
TraesCS5D01G234300.1 Wheat endoplasmic reticulum, golgi 73.72 72.64
TraesCS5B01G225500.1 Wheat cytosol, endoplasmic reticulum, golgi 73.55 72.48
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 73.22 72.15
Zm00001d020461_P001 Maize plasma membrane 72.89 71.71
EER96732 Sorghum endoplasmic reticulum, golgi 73.22 71.68
Os09t0415700-01 Rice golgi 72.23 70.94
HORVU5Hr1G102720.2 Barley cytosol 59.34 70.25
Os03t0379100-01 Rice endoplasmic reticulum, golgi, vacuole 68.93 68.25
TraesCS5D01G429900.1 Wheat endoplasmic reticulum, golgi, vacuole 68.26 67.48
CDY70748 Canola cytosol, peroxisome 47.27 66.51
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 66.94 66.39
TraesCS5B01G423200.2 Wheat cytosol, endoplasmic reticulum, golgi, mitochondrion 68.1 66.34
TraesCS5A01G421600.2 Wheat endoplasmic reticulum 67.93 66.18
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 67.11 65.48
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 67.11 65.27
CDX85977 Canola cytosol 47.44 59.42
CDX93797 Canola cytosol 47.11 59.01
Zm00001d029336_P002 Maize cytosol 66.78 58.81
CDY70936 Canola cytosol 17.36 57.38
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 67.11 56.0
Zm00001d047183_P002 Maize golgi 57.69 55.93
CDY01971 Canola endoplasmic reticulum, extracellular 38.02 55.29
CDX84046 Canola cytosol 54.55 53.92
CDX94256 Canola cytosol 54.88 53.63
CDY25257 Canola cytosol 54.88 53.55
CDY44966 Canola cytosol 54.71 53.39
CDX99540 Canola cytosol 46.94 52.89
CDX99539 Canola cytosol 54.38 52.64
CDX83493 Canola golgi 35.21 51.45
CDY18904 Canola endoplasmic reticulum 52.89 50.55
CDY57187 Canola cytosol 25.95 50.32
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 52.07 50.16
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 52.4 50.16
CDY54063 Canola mitochondrion 45.45 49.64
CDY68187 Canola mitochondrion 44.13 43.27
CDY43336 Canola cytosol 13.55 42.71
CDY12278 Canola endoplasmic reticulum, golgi 41.49 41.83
CDY22567 Canola endoplasmic reticulum, golgi 41.49 41.83
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 41.49 41.63
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 41.49 41.63
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 41.32 41.46
CDX74348 Canola plastid 40.33 40.87
CDX76494 Canola endoplasmic reticulum, golgi 39.5 40.78
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.0 40.54
CDY07198 Canola mitochondrion 40.0 40.4
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 39.34 40.27
CDY51142 Canola cytosol 40.33 39.55
CDY10370 Canola cytosol 17.69 38.91
CDX94861 Canola endoplasmic reticulum, golgi 36.69 36.82
CDX92981 Canola endoplasmic reticulum, golgi 36.86 36.8
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 39.67 36.53
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 36.53 36.17
CDX98606 Canola vacuole 39.67 36.14
CDX89824 Canola endoplasmic reticulum, golgi 37.02 36.13
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 36.53 36.05
CDX70565 Canola endoplasmic reticulum 36.2 36.02
CDX78577 Canola endoplasmic reticulum, golgi 36.03 35.86
CDX86634 Canola endoplasmic reticulum, golgi 36.53 35.65
CDY15505 Canola endoplasmic reticulum, golgi 36.53 35.65
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 36.53 35.65
CDY00911 Canola mitochondrion 33.72 34.87
CDY61681 Canola endoplasmic reticulum, golgi 39.17 34.75
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 33.39 34.59
CDY08621 Canola mitochondrion, plastid 33.39 34.59
CDX87530 Canola cytosol, golgi, peroxisome, plastid 36.69 34.21
CDX70263 Canola plastid 33.39 34.12
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 36.53 34.1
CDX78919 Canola cytosol, golgi 39.34 33.66
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.69 33.19
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 33.06 33.06
CDX98897 Canola golgi, mitochondrion 37.69 32.9
CDY24949 Canola endoplasmic reticulum, plasma membrane 36.2 32.4
CDY07639 Canola endoplasmic reticulum 36.03 32.2
CDX74837 Canola mitochondrion 36.2 31.79
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.36 31.7
CDY33299 Canola nucleus 31.41 31.46
CDY20475 Canola endoplasmic reticulum, golgi 35.7 31.35
CDY27362 Canola plasma membrane 52.23 31.32
CDX99828 Canola golgi 38.68 31.2
CDY48339 Canola cytosol 38.68 30.95
CDY44314 Canola endoplasmic reticulum 37.69 30.65
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 33.39 30.61
CDX94669 Canola endoplasmic reticulum 37.69 30.44
CDY31339 Canola plasma membrane 38.02 30.1
CDY24913 Canola mitochondrion 33.22 29.91
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.52 29.79
CDY39830 Canola plasma membrane 37.85 29.66
CDY66535 Canola nucleus 31.07 28.7
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.02 28.04
CDY66721 Canola golgi 24.13 27.6
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.19 26.79
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 33.88 26.73
CDY67390 Canola mitochondrion 29.92 25.14
CDY26666 Canola mitochondrion 29.75 25.1
CDX70102 Canola cytosol 38.84 24.97
CDY72237 Canola nucleus 9.75 14.71
CDY33300 Canola plastid 2.48 6.28
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078I555UniProt:A0A078I555EnsemblPlants:CDY45006
ProteinID:CDY45006ProteinID:CDY45006.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00081207001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1051InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EE50E2:::
Description
BnaCnng12360DBnaCnng12360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I555]
Coordinates
chrLK032608:-:198977..202330
Molecular Weight (calculated)
68887.0 Da
IEP (calculated)
7.752
GRAVY (calculated)
-0.412
Length
605 amino acids
Sequence
(BLAST)
001: MAIKSDNKTR SSVQIFIVFS LCCFFYILGA WQRSGFGKGD SIALEMTNSA SAADCNIVPS LNFETHHAGE SSALVASTKV KTFEPCSARY TDYTPCHDQK
101: RAMTFPRESM IYRERHCVPE NEKLRCLVPA PKGYVTPFSW PKSRDYVPYA NAPYKALTVE KAIQNWIQYE GEVFRFPGGG TQFPQGADKY IDQLASVIPM
201: ENGTVRTALD TGCGVASWGA YLWSRNVRAM SFAPRDSHEA QVQFALERGV PAVIGVLGSI KLPYPTRAFD MAHCSRCLIP WGANDGMYLM EVDRVLRPGG
301: YWILSGPPIN WKVNYKAWQR PREDLQEEQR RIEETAKLLC WEKKYEHGEI AIWQKRLNDE ACRSRQDDPR ANFCKTDDTD DVWYKKMEAC ITPYPETSEL
401: QVFPDRLNSV PPRISSGSVS GVTADAYEDD NRQWKKHVKA YKRINGLLDT GRYRNIMDMN AGFGGFAAAI ESQKLWVMNV VPTIAEKNRL GVVYERGLIG
501: IYHDWCEAFS TYPRTYDLIH ANHLFSLYKN KCNADDILLE MDRILRPEGA VIIRDDVDTL IKVKRIISGM RWDSKLVDHE DGPLVNEKVL IAVKQYWVTN
601: STASH
Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.