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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, mitochondrion, golgi, plasma membrane, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, mitochondrion, plasma membrane, plastid
Any Predictor:extracellular, golgi, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33299 Canola nucleus 78.23 99.34
CDY66535 Canola nucleus 75.62 88.55
Bra038881.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid, vacuole 99.22 84.37
AT3G51070.1 Thale cress extracellular, mitochondrion, plasma membrane, plastid, vacuole 87.74 75.2
VIT_04s0023g02790.t01 Wine grape cytosol 48.24 73.12
CDY72237 Canola nucleus 30.9 59.1
CDY33300 Canola plastid 18.12 58.16
KRH28732 Soybean endoplasmic reticulum 56.45 56.38
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 50.33 56.19
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 57.37 55.28
CDY10370 Canola cytosol 19.69 54.91
Os06t0712800-01 Rice cytosol 31.94 54.81
CDY66721 Canola golgi 37.55 54.44
CDX84330 Canola endoplasmic reticulum, plasma membrane 50.59 54.42
CDY44314 Canola endoplasmic reticulum 51.5 53.09
CDY31339 Canola plasma membrane 52.41 52.62
CDX94669 Canola endoplasmic reticulum 51.24 52.47
CDY39830 Canola plasma membrane 52.8 52.46
CDX99828 Canola golgi 51.11 52.27
CDY43336 Canola cytosol 13.04 52.08
CDY48339 Canola cytosol 51.24 51.98
GSMUA_Achr4P19870_001 Banana golgi, mitochondrion 55.8 51.88
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 51.37 51.71
PGSC0003DMT400009110 Potato cytosol 54.11 50.61
Solyc02g084670.2.1 Tomato unclear 57.76 50.17
KRH69842 Soybean mitochondrion 53.45 49.64
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 50.72 48.69
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 52.67 48.1
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 35.72 46.92
HORVU0Hr1G021970.3 Barley cytosol, nucleus 48.37 46.2
OQU77087 Sorghum mitochondrion 52.8 43.88
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 33.9 42.98
TraesCS7D01G380100.1 Wheat mitochondrion 50.72 42.61
TraesCS7B01G286500.1 Wheat mitochondrion 50.59 42.45
CDY24913 Canola mitochondrion 35.98 41.07
TraesCS7A01G383700.2 Wheat plastid 47.07 39.37
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 33.64 39.09
CDX92981 Canola endoplasmic reticulum, golgi 29.2 36.96
CDX94861 Canola endoplasmic reticulum, golgi 28.94 36.82
CDX89824 Canola endoplasmic reticulum, golgi 29.47 36.45
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 29.47 36.45
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 29.07 36.38
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 28.81 36.17
Zm00001d036423_P002 Maize mitochondrion 38.72 36.13
CDX70565 Canola endoplasmic reticulum 28.42 35.86
CDX85977 Canola cytosol 22.56 35.82
CDX93797 Canola cytosol 22.56 35.82
CDY50730 Canola cytosol 23.08 35.69
CDX86634 Canola endoplasmic reticulum, golgi 28.81 35.65
CDY15505 Canola endoplasmic reticulum, golgi 28.81 35.65
CDX78577 Canola endoplasmic reticulum, golgi 28.16 35.53
CDX98897 Canola golgi, mitochondrion 31.42 34.78
CDY24949 Canola endoplasmic reticulum, plasma membrane 30.51 34.62
CDY07639 Canola endoplasmic reticulum 30.51 34.56
CDX87530 Canola cytosol, golgi, peroxisome, plastid 29.2 34.51
CDX70263 Canola plastid 26.6 34.46
CDY46435 Canola endoplasmic reticulum, golgi 26.99 34.33
CDX99540 Canola cytosol 23.99 34.26
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 28.94 34.26
CDY26666 Canola mitochondrion 31.81 34.03
CDY40268 Canola endoplasmic reticulum, golgi 26.86 33.99
CDX74837 Canola mitochondrion 30.51 33.96
CDX76494 Canola endoplasmic reticulum, golgi 25.95 33.96
CDY45006 Canola endoplasmic reticulum, golgi 26.73 33.88
CDY67390 Canola mitochondrion 31.68 33.75
CDY00911 Canola mitochondrion 25.68 33.68
CDY20475 Canola endoplasmic reticulum, golgi 30.25 33.67
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 25.95 33.67
CDY01971 Canola endoplasmic reticulum, extracellular 18.25 33.65
CDY08621 Canola mitochondrion, plastid 25.55 33.56
CDY16198 Canola endoplasmic reticulum, golgi 26.47 33.5
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 26.08 33.17
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 26.08 33.17
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 26.08 33.17
CDY25257 Canola cytosol 26.73 33.06
CDY70748 Canola cytosol, peroxisome 18.51 33.02
CDY12278 Canola endoplasmic reticulum, golgi 25.81 33.0
CDX94256 Canola cytosol 26.6 32.96
CDX84046 Canola cytosol 26.21 32.84
CDY22567 Canola endoplasmic reticulum, golgi 25.68 32.83
CDX74348 Canola plastid 25.55 32.83
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 25.55 32.83
CDX99539 Canola cytosol 26.6 32.64
CDY54063 Canola mitochondrion 23.34 32.31
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 26.08 32.26
CDY44966 Canola cytosol 26.08 32.26
CDY07198 Canola mitochondrion 25.16 32.22
CDX83493 Canola golgi 17.34 32.13
CDY18904 Canola endoplasmic reticulum 26.08 31.6
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 25.95 31.49
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 25.42 31.35
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 25.42 31.05
CDY51142 Canola cytosol 24.9 30.96
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 25.55 29.83
CDX98606 Canola vacuole 25.68 29.67
CDY68187 Canola mitochondrion 23.73 29.5
CDY61681 Canola endoplasmic reticulum, golgi 25.95 29.18
CDX78919 Canola cytosol, golgi 26.08 28.29
CDY70936 Canola cytosol 6.52 27.32
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 25.81 27.31
CDY57187 Canola cytosol 11.08 27.24
CDX70102 Canola cytosol 32.2 26.25
CDY27362 Canola plasma membrane 25.42 19.33
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078GMV0UniProt:A0A078GMV0EnsemblPlants:CDY26534
ProteinID:CDY26534ProteinID:CDY26534.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00035390001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF944InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EE9B08SEG:seg:
Description
BnaC01g23650DBnaC01g23650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMV0]
Coordinates
chrLK032191:+:550542..555437
Molecular Weight (calculated)
87192.0 Da
IEP (calculated)
6.176
GRAVY (calculated)
-0.856
Length
767 amino acids
Sequence
(BLAST)
001: MAFGKGRGNK RSSSTSYAST ITMVVFVALC VIGVWMLSSN SIIPPQISQA NTRTVISETE RADVSASSNG NDEPEPTRQE SDEHPTYEDN PGKLPDDAIK
101: SEYEQQKSAK EKNEKTSSKA RDETKEEQPM ETEQGGTSEN SKNEENGQQQ QQQDDQNSGK EENMENNTTS EENEKEQKST KDENGQQDEH NTTEDESGSK
201: EEQSTTKEDN VEQQQEEQKE EKRQESSEAS GFGSGIPKES AESQKSWKSQ ATESKDEKQR QTTESNTIES IMVGKAWELC NATAGYDYIP CLDNEAAIKK
301: LTSRRHFEHR ERHCPEDPPT CLVSLPDGYK ESIKWPESRD KIWYHNVPHT KLAEVKGHQN WVKVTGEFLT FPGGGTQFIH GALHYIDFLQ QALKNIAWGK
401: RTRVVLDVGC GVASFGGFLF ERDVIAMSLA PKDEHEAQVQ FALERKIPAI SAVMGSKRLP FPSRVFDLIH CARCRVPWHN EGGMLLLELN RMLRPGGYFV
501: WSATPVYQKL EEDVQIWKEM SALTKSMCWE LVTINKDKLN GIGAAIYQKP TTNECYEKRK RNRPPMCKNN DDANAAWYVP LQACMHKAPT NVVERGSKWP
601: VNWPRRLQTP PYWLNSSQMG IYGKPAPRDF TTDYEHWKHV VSKVYMNEIG ISWSNVRNVM DMRAVYGGFA AALKDLQVTY PRSYDLLHAD HLFSKLRPRC
701: NLVPVMAEVD RIVRPGGKLI VRDEANVIRE IENMLKSLHW DVHLTFSKHQ EGILSAQKGF WRPDTSP
Best Arabidopsis Sequence Match ( AT3G51070.1 )
(BLAST)
001: MAFGRGRGNK RTSTSSYAST ITMVIFVALC VFGVWMLSSN SVIPPQITQG STRAAVAETE RSDVSASSNG NDEPEPTKQE SDEQQAFEDN PGKLPDDAVK
101: SEDEQRKSAK EKSETTSSKT QTQETQQNND DKISEEKEKD NGKENQTVQE SEEGQMKKVV KEFEKEQKQQ RDEDAGTQPK GTQGQEQGQG KEQPDVEQGN
201: KQGQEQDSNT DVTFTDATKQ EQPMETGQGE TSETSKNEEN GQPEEQNSGN EETGQQNEEK TTASEENGKG EKSMKDENGQ QEEHTTAEEE SGNKEEESTS
301: KDENMEQQEE RKDEKKHEQG SEASGFGSGI PKESAESQKS WKSQATESKD EKQRQTSESN TVERIMDGNA WVLCNATAGT DYIPCLDNEE AIMKLRSRRH
401: FEHRERHCPE DPPTCLVPLP EGYKEAIKWP ESRDKIWYHN VPHTKLAEVK GHQNWVKVTG EFLTFPGGGT QFIHGALHYI DFLQQSLKNI AWGKRTRVIL
501: DVGCGVASFG GFLFERDVIA MSLAPKDEHE AQVQFALERK IPAISAVMGS KRLPFPSRVF DLIHCARCRV PWHNEGGMLL LELNRMLRPG GYFVWSATPV
601: YQKLEEDVQI WKEMSALTKS LCWELVTINK DKLNGIGAAI YQKPATNECY EKRKHNKPPL CKNNDDANAA WYVPLQACMH KVPTNVVERG SKWPVNWPRR
701: LQTPPYWLNS SQMGIYGKPA PRDFTTDYEH WKHVVSKVYM NEIGISWSNV RNVMDMRAVY GGFAAALKDL QVWVMNVVNI NSPDTLPIIY ERGLFGIYHD
801: WCESFSTYPR SYDLLHADHL FSKLRTRCNL VPVMAEVDRI VRPGGKLIVR DESNVIREVE NMLKSLHWDV HLTFSKHQEG ILSAQKGFWR PETSQ
Arabidopsis Description
Probable methyltransferase PMT27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD39]
SUBAcon: [extracellular,mitochondrion,vacuole,plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.