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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004933.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion, plastid 98.58 98.73
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 98.42 98.58
AT2G45750.1 Thale cress endoplasmic reticulum, golgi 90.68 90.97
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 89.57 90.29
KRH00647 Soybean cytosol 63.19 74.21
CDY01971 Canola endoplasmic reticulum, extracellular 48.03 73.08
CDY54063 Canola mitochondrion 60.51 69.13
HORVU2Hr1G095070.1 Barley cytosol 46.92 68.59
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 66.19 67.36
PGSC0003DMT400071370 Potato endoplasmic reticulum, golgi 66.67 66.35
Solyc01g091690.2.1 Tomato plastid 66.35 66.04
CDX85977 Canola cytosol 49.92 65.42
CDX93797 Canola cytosol 49.29 64.6
KRH48242 Soybean endoplasmic reticulum 65.09 64.27
VIT_15s0048g01940.t01 Wine grape mitochondrion 64.14 64.24
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, golgi 52.61 62.71
GSMUA_Achr5P13670_001 Banana plastid 58.29 62.02
TraesCS2A01G400300.1 Wheat mitochondrion 60.35 60.25
KXG26943 Sorghum plastid 60.98 60.22
Zm00001d002625_P003 Maize mitochondrion 60.19 59.72
TraesCS2D01G397900.1 Wheat mitochondrion 60.03 59.56
Zm00001d026079_P001 Maize plastid 60.03 59.28
TraesCS6B01G269400.1 Wheat mitochondrion, plastid 60.19 59.25
TraesCS2B01G418400.1 Wheat golgi 59.72 59.25
CDX99540 Canola cytosol 50.08 59.03
CDY70936 Canola cytosol 17.06 59.02
Os02t0675700-01 Rice mitochondrion 60.19 58.98
Os04t0570800-02 Rice golgi 60.03 58.82
TraesCS6A01G256000.1 Wheat mitochondrion 59.56 58.81
TraesCS6D01G237200.1 Wheat golgi 59.72 58.79
CDY50730 Canola cytosol 45.97 58.67
CDX84046 Canola cytosol 56.56 58.5
CDX94256 Canola cytosol 57.03 58.32
HORVU6Hr1G065360.4 Barley mitochondrion 59.4 58.29
CDX99539 Canola cytosol 57.35 58.08
CDY25257 Canola cytosol 56.87 58.06
CDY44966 Canola cytosol 56.4 57.58
Zm00001d051442_P002 Maize plasma membrane 58.61 57.34
GSMUA_Achr5P03280_001 Banana plastid 51.82 57.14
CDY70748 Canola cytosol, peroxisome 38.39 56.51
CDY27362 Canola plasma membrane 89.89 56.39
EES05735 Sorghum mitochondrion, plastid 59.08 56.16
CDY40268 Canola endoplasmic reticulum, golgi 50.87 53.14
CDY46435 Canola endoplasmic reticulum, golgi 50.55 53.07
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 51.97 53.06
CDX83493 Canola golgi 34.6 52.9
CDY45006 Canola endoplasmic reticulum, golgi 50.55 52.89
CDY16198 Canola endoplasmic reticulum, golgi 50.55 52.81
CDY57187 Canola cytosol 25.28 51.28
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 49.92 50.8
CDY12278 Canola endoplasmic reticulum, golgi 42.97 45.33
CDY22567 Canola endoplasmic reticulum, golgi 42.97 45.33
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 42.65 44.78
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 42.65 44.78
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 42.5 44.61
CDY68187 Canola mitochondrion 43.13 44.25
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 49.92 43.59
CDX76494 Canola endoplasmic reticulum, golgi 40.28 43.52
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 40.6 43.49
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.18 41.54
CDX74348 Canola plastid 38.86 41.21
CDY07198 Canola mitochondrion 38.55 40.73
CDY51142 Canola cytosol 39.02 40.03
CDY10370 Canola cytosol 17.22 39.64
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 40.6 39.12
CDY43336 Canola cytosol 11.85 39.06
CDX98606 Canola vacuole 40.92 39.01
CDX89824 Canola endoplasmic reticulum, golgi 37.6 38.39
CDX94861 Canola endoplasmic reticulum, golgi 36.49 38.31
CDX92981 Canola endoplasmic reticulum, golgi 36.65 38.28
CDX86634 Canola endoplasmic reticulum, golgi 37.28 38.06
CDY15505 Canola endoplasmic reticulum, golgi 37.28 38.06
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 37.28 38.06
CDY61681 Canola endoplasmic reticulum, golgi 40.76 37.83
CDX78577 Canola endoplasmic reticulum, golgi 36.18 37.66
CDX70565 Canola endoplasmic reticulum 36.02 37.5
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 36.18 37.36
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 36.02 37.32
CDX78919 Canola cytosol, golgi 40.92 36.63
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 33.02 35.79
CDX74837 Canola mitochondrion 38.55 35.41
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 36.18 35.34
CDY24949 Canola endoplasmic reticulum, plasma membrane 37.6 35.21
CDX87530 Canola cytosol, golgi, peroxisome, plastid 36.02 35.13
CDY07639 Canola endoplasmic reticulum 37.44 35.01
CDY20475 Canola endoplasmic reticulum, golgi 37.91 34.83
CDX70263 Canola plastid 31.91 34.12
CDY08621 Canola mitochondrion, plastid 31.44 34.08
CDY00911 Canola mitochondrion 31.28 33.85
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 32.07 33.55
CDX98897 Canola golgi, mitochondrion 36.49 33.33
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 34.28 31.59
CDY33299 Canola nucleus 29.7 31.13
CDY24913 Canola mitochondrion 32.7 30.8
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 32.07 30.76
CDX84330 Canola endoplasmic reticulum, plasma membrane 34.28 30.43
CDY31339 Canola plasma membrane 35.39 29.32
CDY44314 Canola endoplasmic reticulum 34.12 29.03
CDY39830 Canola plasma membrane 35.39 29.02
CDY66535 Canola nucleus 30.02 29.01
CDY48339 Canola cytosol 34.6 28.97
CDX99828 Canola golgi 34.12 28.8
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 34.6 28.74
CDX94669 Canola endoplasmic reticulum 33.97 28.7
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 35.39 28.04
CDY66721 Canola golgi 22.43 26.84
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 35.39 26.67
CDY26666 Canola mitochondrion 29.7 26.22
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 31.6 26.08
CDY67390 Canola mitochondrion 29.54 25.97
CDX70102 Canola cytosol 36.97 24.87
CDY72237 Canola nucleus 9.32 14.71
CDY33300 Canola plastid 1.9 5.02
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078G087UniProt:A0A078G087EnsemblPlants:CDY18904
ProteinID:CDY18904ProteinID:CDY18904.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00006096001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1059InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EEDBA1:::
Description
BnaC04g04460DBnaC04g04460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G087]
Coordinates
chrLK032090:-:238846..241702
Molecular Weight (calculated)
72540.1 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.530
Length
633 amino acids
Sequence
(BLAST)
001: MNLSTRISSS RDKKSNLYYV TLVAVLCVGS YLLGVWQNST VNPRAAFDTS TDAPPCEKFS KTTSATDLDF NAHHNPHDPP PSTVTAVSFP SCDAALSEHT
101: PCEDAKRSLK FSRERLEYRQ RHCPEREEAL KCRIPAPYGY KTPFRWPESR DVAWFANVPH TELTVEKKNQ NWVRYENDRF WFPGGGTMFP RGADAYIDDI
201: GRLIDLSDGS IRTAIDTGCG VASFGAYLLS RNITTMSFAP RDTHEAQVQF ALERGVPAMI GIMATIRLPY PSRAFDLAHC SRCLIPWGKN DGVYLMEVDR
301: VLRPGGYWIL SGPPINWQKR WKGWERTMDD LNEEQTQIEQ VARSLCWKKV VQRDDLAIWQ KPFNHIHCKK MRQVLKNPEF CRYDQDPDMA WYTKMESCLT
401: PLPEVDEAED LKTVAGGKLE KWPARLNAVP PRVNNGDLKE ITPEAFLEDT ELWKQRVSYY KKLDYQLGET GRYRNLLDMN AYLGGFAAAL ADEPVWVMNV
501: VPVEAKHNTL GVIYERGLIG TYQNWCEAMS TYPRTYDFIH ADSVFTLYQD KCEPEDILLE MDRVLRPGGG VIIRDDVDVL IKVKELSKGF QWQGRIADHE
601: KGPHERVKIY YAVKQYWTVP APEEDKNNTK ALS
Best Arabidopsis Sequence Match ( AT2G45750.1 )
(BLAST)
001: MNLFTRISSR TKKANLYYVT LVALLCIASY LLGIWQNTAV NPRAAFDDSD GTPCEGFTRP NSTKDLDFDA HHNIQDPPPV TETAVSFPSC AAALSEHTPC
101: EDAKRSLKFS RERLEYRQRH CPEREEILKC RIPAPYGYKT PFRWPASRDV AWFANVPHTE LTVEKKNQNW VRYENDRFWF PGGGTMFPRG ADAYIDDIGR
201: LIDLSDGSIR TAIDTGCGVA SFGAYLLSRN ITTMSFAPRD THEAQVQFAL ERGVPAMIGI MATIRLPYPS RAFDLAHCSR CLIPWGQNDG AYLMEVDRVL
301: RPGGYWILSG PPINWQKRWK GWERTMDDLN AEQTQIEQVA RSLCWKKVVQ RDDLAIWQKP FNHIDCKKTR EVLKNPEFCR HDQDPDMAWY TKMDSCLTPL
401: PEVDDAEDLK TVAGGKVEKW PARLNAIPPR VNKGALEEIT PEAFLENTKL WKQRVSYYKK LDYQLGETGR YRNLVDMNAY LGGFAAALAD DPVWVMNVVP
501: VEAKLNTLGV IYERGLIGTY QNWCEAMSTY PRTYDFIHAD SVFTLYQGQC EPEEILLEMD RILRPGGGVI IRDDVDVLIK VKELTKGLEW EGRIADHEKG
601: PHEREKIYYA VKQYWTVPAP DEDKNNTSAL S
Arabidopsis Description
Probable methyltransferase PMT16 [Source:UniProtKB/Swiss-Prot;Acc:O80844]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.