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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33299 Canola nucleus 83.97 91.06
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 88.55 75.62
CDY72237 Canola nucleus 45.19 73.82
VIT_04s0023g02790.t01 Wine grape cytosol 56.18 72.73
Bra036837.1-P Field mustard golgi, mitochondrion, plasma membrane, plastid, vacuole 99.85 71.55
AT3G51070.1 Thale cress extracellular, mitochondrion, plasma membrane, plastid, vacuole 86.56 63.35
Os06t0712800-01 Rice cytosol 37.25 54.59
CDY10370 Canola cytosol 22.9 54.55
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 56.34 53.71
CDY43336 Canola cytosol 15.42 52.6
CDX84330 Canola endoplasmic reticulum, plasma membrane 55.88 51.33
KRH28732 Soybean endoplasmic reticulum 60.0 51.17
CDY66721 Canola golgi 41.07 50.85
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 60.92 50.13
CDY44314 Canola endoplasmic reticulum 56.79 50.0
CDX94669 Canola endoplasmic reticulum 57.1 49.93
CDX99828 Canola golgi 56.95 49.73
PGSC0003DMT400009110 Potato cytosol 61.83 49.39
CDY48339 Canola cytosol 56.95 49.34
CDY31339 Canola plasma membrane 57.25 49.08
CDY39830 Canola plasma membrane 57.4 48.7
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 56.64 48.69
GSMUA_Achr4P19870_001 Banana golgi, mitochondrion 59.54 47.27
Solyc02g084670.2.1 Tomato unclear 61.83 45.87
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 55.88 45.81
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 40.61 45.55
HORVU0Hr1G021970.3 Barley cytosol, nucleus 55.42 45.21
KRH69842 Soybean mitochondrion 56.64 44.92
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 56.03 43.69
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 38.17 41.32
OQU77087 Sorghum mitochondrion 56.34 39.98
TraesCS7D01G380100.1 Wheat mitochondrion 55.42 39.76
CDY24913 Canola mitochondrion 40.76 39.73
TraesCS7B01G286500.1 Wheat mitochondrion 55.42 39.72
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 38.02 37.73
TraesCS7A01G383700.2 Wheat plastid 51.3 36.64
CDX70565 Canola endoplasmic reticulum 33.28 35.86
CDX94861 Canola endoplasmic reticulum, golgi 32.98 35.82
CDX92981 Canola endoplasmic reticulum, golgi 33.13 35.81
CDY50730 Canola cytosol 27.02 35.69
CDX78577 Canola endoplasmic reticulum, golgi 32.98 35.53
CDX85977 Canola cytosol 26.11 35.4
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 32.98 35.24
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 33.28 35.16
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 32.67 35.02
CDX89824 Canola endoplasmic reticulum, golgi 33.13 35.0
CDX93797 Canola cytosol 25.8 34.99
CDX86634 Canola endoplasmic reticulum, golgi 32.98 34.84
CDY15505 Canola endoplasmic reticulum, golgi 32.98 34.84
CDY07639 Canola endoplasmic reticulum 35.11 33.97
CDY24949 Canola endoplasmic reticulum, plasma membrane 34.96 33.88
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 33.44 33.8
CDX87530 Canola cytosol, golgi, peroxisome, plastid 33.44 33.74
CDX98897 Canola golgi, mitochondrion 35.42 33.48
CDX76494 Canola endoplasmic reticulum, golgi 29.77 33.28
CDX74837 Canola mitochondrion 34.96 33.24
CDX70263 Canola plastid 29.92 33.11
CDY20475 Canola endoplasmic reticulum, golgi 34.66 32.95
CDY01971 Canola endoplasmic reticulum, extracellular 20.92 32.93
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 29.62 32.83
CDY00911 Canola mitochondrion 29.31 32.82
CDY70748 Canola cytosol, peroxisome 21.53 32.79
CDY08621 Canola mitochondrion, plastid 29.16 32.71
CDY26666 Canola mitochondrion 35.73 32.64
CDY67390 Canola mitochondrion 35.73 32.5
Zm00001d036423_P002 Maize mitochondrion 40.46 32.24
CDX74348 Canola plastid 29.31 32.16
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 29.31 32.16
CDX99540 Canola cytosol 26.26 32.03
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 29.47 32.01
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 29.47 32.01
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 29.47 32.01
CDX83493 Canola golgi 20.15 31.88
CDY12278 Canola endoplasmic reticulum, golgi 29.16 31.83
CDY22567 Canola endoplasmic reticulum, golgi 29.01 31.67
CDY46435 Canola endoplasmic reticulum, golgi 29.01 31.51
CDY07198 Canola mitochondrion 28.7 31.39
CDX84046 Canola cytosol 29.31 31.37
CDY40268 Canola endoplasmic reticulum, golgi 29.01 31.35
CDY16198 Canola endoplasmic reticulum, golgi 28.86 31.19
CDY25257 Canola cytosol 29.47 31.13
CDY45006 Canola endoplasmic reticulum, golgi 28.7 31.07
CDX94256 Canola cytosol 29.31 31.02
CDY44966 Canola cytosol 29.16 30.81
CDX99539 Canola cytosol 29.31 30.72
CDY54063 Canola mitochondrion 25.95 30.69
CDY51142 Canola cytosol 28.7 30.47
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 28.86 30.1
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 29.01 30.06
CDY18904 Canola endoplasmic reticulum 29.01 30.02
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 28.24 29.84
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 28.09 29.58
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 29.16 29.07
CDX98606 Canola vacuole 29.31 28.92
CDY61681 Canola endoplasmic reticulum, golgi 29.62 28.45
CDY68187 Canola mitochondrion 26.72 28.36
CDX78919 Canola cytosol, golgi 29.77 27.58
CDY57187 Canola cytosol 12.82 26.92
CDY70936 Canola cytosol 7.48 26.78
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 28.55 25.79
CDX70102 Canola cytosol 35.57 24.76
CDY27362 Canola plasma membrane 29.01 18.83
CDY33300 Canola plastid 3.36 9.21
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078JJ90UniProt:A0A078JJ90EnsemblPlants:CDY66535
ProteinID:CDY66535ProteinID:CDY66535.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00054505001PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF944InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EDF423
SEG:seg:::::
Description
BnaA09g54660DBnaA09g54660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ90]
Coordinates
chrLK035312:-:14500..17500
Molecular Weight (calculated)
74713.0 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.792
Length
655 amino acids
Sequence
(BLAST)
001: MQDVKQGQDQ DSNTDVTYTD ATKEELPLEQ QQQEGQNSKN EENGQQQQQE DQNLGKEESG QQNMENNNMV NDENVKEQKN MKDENGQQDE QSTTKEENVE
101: QQQAEQKDEK KQEGAGASGF GSGIPKESAE SQKSWKSQAT ESKDEKQRQT SESNNADSIM TGKAWELCNA TAAYDYIPCL DNEEAIKKLT SRGHFEHRER
201: HCPEDPPTCL VSLPEGYKES IKWPESRDKI WYHNVPHTKL AEVKGHQNWV KVTGEFLTFP GGGTQFIHGA LHYIDFLQQS VKNIAWGKST RVVLDVGCGV
301: ASFGGFLFER DVIAMSLAPK DEHEAQVQFA LERKIPAISA VMGTKRLPFP SRVFDLIHCA RCRVPWHNDG GMLLLELNRM LRPGGYFVWS ATPVYQKLEE
401: DVQIWKEMSA LTKSMCWELV TINKDKLNGI GAAIYQKPTT NECYEKRKHK KPPMCKNNDD SNAAWYVPLQ ACMHKVPTNV VERGSKWPVS WPRRLQTPPY
501: WLNSSQMGIY GKPAPLDFTT DYEHWKHVVS KVYMKEMGIS WSNVRNVMDM RAVYGGFAAA LKDLQVTYPR SYDLLHADHL FSKLKARCNL VPVMAEVDRI
601: VRPGGKLIVR DEANVIREIE NMLKSLHWDV HLTFSKHQEG ILSAQKGFWR PDTSP
Best Arabidopsis Sequence Match ( AT3G51070.1 )
(BLAST)
001: MAFGRGRGNK RTSTSSYAST ITMVIFVALC VFGVWMLSSN SVIPPQITQG STRAAVAETE RSDVSASSNG NDEPEPTKQE SDEQQAFEDN PGKLPDDAVK
101: SEDEQRKSAK EKSETTSSKT QTQETQQNND DKISEEKEKD NGKENQTVQE SEEGQMKKVV KEFEKEQKQQ RDEDAGTQPK GTQGQEQGQG KEQPDVEQGN
201: KQGQEQDSNT DVTFTDATKQ EQPMETGQGE TSETSKNEEN GQPEEQNSGN EETGQQNEEK TTASEENGKG EKSMKDENGQ QEEHTTAEEE SGNKEEESTS
301: KDENMEQQEE RKDEKKHEQG SEASGFGSGI PKESAESQKS WKSQATESKD EKQRQTSESN TVERIMDGNA WVLCNATAGT DYIPCLDNEE AIMKLRSRRH
401: FEHRERHCPE DPPTCLVPLP EGYKEAIKWP ESRDKIWYHN VPHTKLAEVK GHQNWVKVTG EFLTFPGGGT QFIHGALHYI DFLQQSLKNI AWGKRTRVIL
501: DVGCGVASFG GFLFERDVIA MSLAPKDEHE AQVQFALERK IPAISAVMGS KRLPFPSRVF DLIHCARCRV PWHNEGGMLL LELNRMLRPG GYFVWSATPV
601: YQKLEEDVQI WKEMSALTKS LCWELVTINK DKLNGIGAAI YQKPATNECY EKRKHNKPPL CKNNDDANAA WYVPLQACMH KVPTNVVERG SKWPVNWPRR
701: LQTPPYWLNS SQMGIYGKPA PRDFTTDYEH WKHVVSKVYM NEIGISWSNV RNVMDMRAVY GGFAAALKDL QVWVMNVVNI NSPDTLPIIY ERGLFGIYHD
801: WCESFSTYPR SYDLLHADHL FSKLRTRCNL VPVMAEVDRI VRPGGKLIVR DESNVIREVE NMLKSLHWDV HLTFSKHQEG ILSAQKGFWR PETSQ
Arabidopsis Description
Probable methyltransferase PMT27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD39]
SUBAcon: [extracellular,vacuole,mitochondrion,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.