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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G06050.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 85.71 87.1
CDX70102 Canola cytosol 92.5 68.12
PGSC0003DMT400069783 Potato endoplasmic reticulum 66.52 67.99
GSMUA_Achr5P28990_001 Banana cytosol 54.55 67.86
CDY24949 Canola endoplasmic reticulum, plasma membrane 66.09 67.75
VIT_13s0019g02250.t01 Wine grape golgi 66.67 67.35
KRG97843 Soybean endoplasmic reticulum 64.36 67.27
CDY07639 Canola endoplasmic reticulum 65.66 67.21
Solyc05g052970.2.1 Tomato endoplasmic reticulum 65.66 67.11
GSMUA_Achr9P03780_001 Banana cytosol 53.82 66.37
KRH31030 Soybean endoplasmic reticulum, plasma membrane 64.07 66.27
KRH15065 Soybean nucleus 62.77 65.51
KRH73069 Soybean endoplasmic reticulum 61.9 65.2
CDX74837 Canola mitochondrion 63.92 64.3
CDY20475 Canola endoplasmic reticulum, golgi 63.78 64.15
EES03874 Sorghum mitochondrion 61.9 62.35
Zm00001d012400_P007 Maize plasma membrane 57.72 61.73
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 57.58 61.57
CDX87530 Canola cytosol, golgi, peroxisome, plastid 57.58 61.48
Os01t0846600-01 Rice mitochondrion 60.61 61.14
Zm00001d042883_P001 Maize mitochondrion, plastid 60.75 60.58
TraesCS3D01G356400.1 Wheat endoplasmic reticulum 60.61 60.17
TraesCS3B01G395100.1 Wheat plastid 61.04 59.83
TraesCS3A01G362600.1 Wheat golgi 60.61 59.83
HORVU3Hr1G085900.1 Barley golgi, plastid 60.89 56.42
CDY43336 Canola cytosol 12.27 44.27
CDX85977 Canola cytosol 30.16 43.27
CDY50730 Canola cytosol 30.74 42.94
CDX93797 Canola cytosol 29.58 42.44
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 34.78 41.27
CDX94861 Canola endoplasmic reticulum, golgi 35.5 40.8
CDY10370 Canola cytosol 16.16 40.73
CDX92981 Canola endoplasmic reticulum, golgi 35.5 40.59
CDX89824 Canola endoplasmic reticulum, golgi 36.22 40.48
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 36.22 40.48
CDY70936 Canola cytosol 10.68 40.44
CDX86634 Canola endoplasmic reticulum, golgi 35.93 40.16
CDY15505 Canola endoplasmic reticulum, golgi 35.93 40.16
CDX83493 Canola golgi 23.95 40.1
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 35.35 39.97
CDX70565 Canola endoplasmic reticulum 35.06 39.97
CDX78577 Canola endoplasmic reticulum, golgi 35.06 39.97
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 34.92 39.61
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 34.05 39.01
CDY01971 Canola endoplasmic reticulum, extracellular 23.23 38.7
CDY70748 Canola cytosol, peroxisome 23.95 38.6
CDX70263 Canola plastid 32.9 38.51
CDY40268 Canola endoplasmic reticulum, golgi 33.33 38.12
CDY46435 Canola endoplasmic reticulum, golgi 32.9 37.81
CDY16198 Canola endoplasmic reticulum, golgi 33.04 37.79
CDY33299 Canola nucleus 32.9 37.75
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.37 37.7
CDY45006 Canola endoplasmic reticulum, golgi 32.9 37.69
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 33.77 37.26
CDX84046 Canola cytosol 32.9 37.25
CDX76494 Canola endoplasmic reticulum, golgi 31.46 37.2
CDX99540 Canola cytosol 28.72 37.06
CDY57187 Canola cytosol 16.59 36.86
CDY12278 Canola endoplasmic reticulum, golgi 31.89 36.83
CDY44966 Canola cytosol 32.9 36.77
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 31.17 36.55
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 31.46 36.52
CDX94256 Canola cytosol 32.61 36.51
CDY22567 Canola endoplasmic reticulum, golgi 31.6 36.5
CDY18904 Canola endoplasmic reticulum 33.33 36.49
CDY54063 Canola mitochondrion 29.15 36.46
CDY25257 Canola cytosol 32.61 36.45
CDY00911 Canola mitochondrion 30.74 36.41
CDX74348 Canola plastid 31.31 36.35
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 32.61 36.33
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 33.04 36.23
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.23 36.19
CDY68187 Canola mitochondrion 32.18 36.14
CDY08621 Canola mitochondrion, plastid 30.45 36.13
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 32.32 36.13
CDY07198 Canola mitochondrion 31.02 35.89
CDX99539 Canola cytosol 32.32 35.84
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 31.17 35.82
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 31.17 35.82
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 31.02 35.66
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 33.91 35.61
CDY66535 Canola nucleus 33.48 35.42
CDY24913 Canola mitochondrion 34.2 35.27
CDY44314 Canola endoplasmic reticulum 37.66 35.08
CDY51142 Canola cytosol 31.17 35.01
CDX94669 Canola endoplasmic reticulum 37.66 34.85
CDY31339 Canola plasma membrane 38.1 34.55
CDY39830 Canola plasma membrane 38.38 34.46
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 37.52 34.12
CDX99828 Canola golgi 36.8 34.0
CDY48339 Canola cytosol 36.8 33.73
CDY66721 Canola golgi 25.4 33.27
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 31.46 33.18
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 38.24 33.17
CDX98606 Canola vacuole 31.31 32.68
CDY61681 Canola endoplasmic reticulum, golgi 31.31 31.82
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 38.1 31.43
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 34.78 31.42
CDY26666 Canola mitochondrion 32.18 31.1
CDX78919 Canola cytosol, golgi 31.6 30.98
CDY67390 Canola mitochondrion 32.03 30.83
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 31.89 30.48
CDY27362 Canola plasma membrane 33.62 23.09
CDY72237 Canola nucleus 10.53 18.2
CDY33300 Canola plastid 1.44 4.18
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078ECW9EnsemblPlants:CDX98897ProteinID:CDX98897
ProteinID:CDX98897.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00107001001PFAM:PF03141PFscan:PS51257PANTHER:PTHR10108PANTHER:PTHR10108:SF789
InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EECBE0SEG:seg
Description
BnaC09g49380D
Coordinates
chrLK031907:+:472219..477543
Molecular Weight (calculated)
78647.4 Da
IEP (calculated)
7.049
GRAVY (calculated)
-0.307
Length
693 amino acids
Sequence
(BLAST)
001: MQYVRMLRIL LKSNLLRSSS FFKISVFVSI SVACFFLGKH WSEDGFRRLV FFSSEPSRSP IVALSPDLGK SYNISDLIHK SLPIPPVLPP PLTPPPPPST
101: VDLQVFGIVD ENGTMSDEFR IGDYDAESLG NQTESESGDG EAELTTARAS VGRIEVCPEV MTDYIPCLDN VEAIKRLEST ARGERFERHC PKEGTGLNCT
201: VPAPNGYRPP IPWPKSRDEV WFNNVPHTRL VEDKGGQNWI LEENDKFKFP GGGTQFIHGA DQYLDQISQM VPDVSFGNHT RVVLDIGCGV ASFGAYLMSR
301: DVLTLSIAPK DVHENQIQFA LERGVPAMVA AFTTRRLLYP SQAFDLVHCS RCRINWTRDD GILLLEVNRM LRAGGYFVWA AQPVYKHEKA LEEQWEEMLN
401: LTTRLCWVLV KKEGYIAIWQ KPTNNTCYLS RDAGIIPPLC NPEDDPDSVW YVDLKACITR IEDNGYGANL APWPSRLQTP PDRLQTIQID SYIARKELFV
501: AEYKYWKEII SNYVNALHWK QIGLRNVMDM RAGYGGFAAA LAELKVDCWV LNVVPVSGAN TLPVIYDRGL LGVMHDWCEP FDTYPRTYDL LHAAGLFSIE
601: RKRCNMTTIM LEMDRILRPG GRVYIRDTIN VMSELQEIGN AMRWHTTLRE TAEGPHASYR VLLCEKKFEK TVESSVDKHH TKKKKRKSKG KRP
Best Arabidopsis Sequence Match ( AT5G06050.1 )
(BLAST)
001: MKLFLNSNLL RNSIFFKISA FVLISVACFF LGKHWSEDGF RRLIFFSAEP SRSPIVALSP DFGKTYNISG LIYESHPILP PSLSPPPPPD SVELKVFGIV
101: NENGTMSDEF QIGDYDVESA ETLGNQTEFE SSDDDDIKST TARVSVRKFE ICSENMTEYI PCLDNVEAIK RLNSTARGER FERNCPNDGM GLNCTVPIPQ
201: GYRSPIPWPR SRDEVWFNNV PHTKLVEDKG GQNWIYKEND KFKFPGGGTQ FIHGADQYLD QISQMIPDIS FGNHTRVVLD IGCGVASFGA YLMSRNVLTM
301: SIAPKDVHEN QIQFALERGV PAMVAAFTTR RLLYPSQAFD LVHCSRCRIN WTRDDGILLL EVNRMLRAGG YFVWAAQPVY KHEKALEEQW EEMLNLTTRL
401: CWVLVKKEGY IAIWQKPVNN TCYLSRGAGV SPPLCNSEDD PDNVWYVDLK ACITRIEENG YGANLAPWPA RLLTPPDRLQ TIQIDSYIAR KELFVAESKY
501: WKEIISNYVN ALHWKQIGLR NVLDMRAGFG GFAAALAELK VDCWVLNVIP VSGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDLLHAAG LFSIERKRCN
601: MTTMMLEMDR ILRPGGRVYI RDTINVTSEL QEIGNAMRWH TSLRETAEGP HSSYRVLLCE KRFESSEKRR TKKRRKTKGK RA
Arabidopsis Description
Probable methyltransferase PMT12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG39]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.