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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013282.1-P Field mustard endoplasmic reticulum, golgi, vacuole 98.84 68.55
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 98.84 68.55
AT4G18030.1 Thale cress endoplasmic reticulum, golgi, mitochondrion, plasma membrane 90.7 62.8
CDY70936 Canola cytosol 24.19 56.83
CDY50730 Canola cytosol 65.35 56.65
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 80.47 55.63
VIT_02s0012g00580.t01 Wine grape endoplasmic reticulum, golgi 76.98 54.17
CDY01971 Canola endoplasmic reticulum, extracellular 52.33 54.09
KRH04297 Soybean endoplasmic reticulum 75.12 52.69
KRH57576 Soybean endoplasmic reticulum 74.88 52.53
CDX85977 Canola cytosol 57.21 50.93
CDX93797 Canola cytosol 57.21 50.93
CDX83493 Canola golgi 47.67 49.52
PGSC0003DMT400062230 Potato endoplasmic reticulum, golgi 70.7 49.35
Solyc08g077240.2.1 Tomato nucleus 70.47 49.19
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 81.16 48.14
CDY46435 Canola endoplasmic reticulum, golgi 66.74 47.6
CDY45006 Canola endoplasmic reticulum, golgi 66.51 47.27
CDY57187 Canola cytosol 34.19 47.12
Os10t0569300-01 Rice golgi 65.81 46.78
TraesCS1A01G213400.1 Wheat endoplasmic reticulum, golgi 65.58 46.69
TraesCS1B01G226800.1 Wheat endoplasmic reticulum, golgi 65.58 46.69
TraesCS1D01G216200.1 Wheat endoplasmic reticulum, golgi 65.58 46.69
CDY40268 Canola endoplasmic reticulum, golgi 65.58 46.53
CDY16198 Canola endoplasmic reticulum, golgi 65.35 46.37
KXG38879 Sorghum mitochondrion 64.42 45.86
Zm00001d030012_P001 Maize golgi 63.95 45.53
CDY43336 Canola cytosol 18.37 41.15
CDX94256 Canola cytosol 58.6 40.71
CDY25257 Canola cytosol 58.6 40.65
CDX84046 Canola cytosol 57.67 40.52
CDY44966 Canola cytosol 58.14 40.32
CDX99539 Canola cytosol 57.67 39.68
CDY18904 Canola endoplasmic reticulum 56.51 38.39
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 56.05 38.13
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 55.58 38.06
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 54.42 37.5
CDX99540 Canola cytosol 46.51 37.24
CDY54063 Canola mitochondrion 46.74 36.28
CDY10370 Canola cytosol 21.4 33.45
CDY68187 Canola mitochondrion 47.21 32.9
CDX74348 Canola plastid 45.35 32.66
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.12 32.5
CDY07198 Canola mitochondrion 45.12 32.39
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 45.35 32.34
CDY12278 Canola endoplasmic reticulum, golgi 45.12 32.33
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 45.12 32.17
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 45.12 32.17
CDY22567 Canola endoplasmic reticulum, golgi 44.88 32.17
CDX76494 Canola endoplasmic reticulum, golgi 43.26 31.74
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 43.49 31.64
CDY51142 Canola cytosol 44.88 31.28
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 43.72 28.61
CDX98606 Canola vacuole 43.72 28.31
CDY08621 Canola mitochondrion, plastid 38.14 28.08
CDY00911 Canola mitochondrion 37.67 27.69
CDY61681 Canola endoplasmic reticulum, golgi 43.26 27.27
CDX78577 Canola endoplasmic reticulum, golgi 38.37 27.14
CDX70565 Canola endoplasmic reticulum 38.14 26.97
CDX70263 Canola plastid 36.74 26.69
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 35.81 26.37
CDX92981 Canola endoplasmic reticulum, golgi 36.98 26.24
CDX94861 Canola endoplasmic reticulum, golgi 36.74 26.2
CDX78919 Canola cytosol, golgi 43.02 26.17
CDX89824 Canola endoplasmic reticulum, golgi 37.21 25.81
CDX86634 Canola endoplasmic reticulum, golgi 36.98 25.65
CDY15505 Canola endoplasmic reticulum, golgi 36.98 25.65
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 36.51 25.61
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 36.28 25.53
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 36.74 25.48
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 35.81 25.45
CDX87530 Canola cytosol, golgi, peroxisome, plastid 38.14 25.27
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 37.67 25.0
CDY24949 Canola endoplasmic reticulum, plasma membrane 38.84 24.7
CDY07639 Canola endoplasmic reticulum 38.84 24.67
CDX74837 Canola mitochondrion 38.84 24.24
CDY27362 Canola plasma membrane 56.28 23.98
CDX98897 Canola golgi, mitochondrion 38.6 23.95
CDY20475 Canola endoplasmic reticulum, golgi 38.37 23.95
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 36.74 23.94
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 37.44 23.44
CDY33299 Canola nucleus 32.79 23.34
CDX84330 Canola endoplasmic reticulum, plasma membrane 38.14 23.0
CDY24913 Canola mitochondrion 35.58 22.77
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 38.37 21.65
CDY44314 Canola endoplasmic reticulum 37.44 21.64
CDX99828 Canola golgi 37.67 21.6
CDY66535 Canola nucleus 32.79 21.53
CDX94669 Canola endoplasmic reticulum 37.44 21.5
CDY48339 Canola cytosol 37.67 21.43
CDY31339 Canola plasma membrane 37.44 21.07
CDY39830 Canola plasma membrane 36.98 20.6
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.21 20.02
CDY26666 Canola mitochondrion 32.56 19.53
CDY67390 Canola mitochondrion 32.56 19.44
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 37.21 19.05
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 33.02 18.51
CDX70102 Canola cytosol 39.3 17.96
CDY66721 Canola golgi 19.07 15.5
CDY72237 Canola nucleus 2.79 2.99
CDY33300 Canola plastid 0.0 0.0
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078JT30UniProt:A0A078JT30EnsemblPlants:CDY70748
ProteinID:CDY70748ProteinID:CDY70748.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00007136001PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF954InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EE5F80SEG:seg
Description
BnaCnng69650DBnaCnng69650D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JT30]
Coordinates
chrLK043162:+:1..2969
Molecular Weight (calculated)
48796.4 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.394
Length
430 amino acids
Sequence
(BLAST)
001: IDELASVIPI KDGSVRTALD TGCGVASWGA YMLKRNVLTM SFAPRDNHEA QVQFALERGV PAIIAVLGSI LLPYPPRAFD MAQCSRCLIP WTANEGTYLM
101: EVDRVLRPGG YWVLSGPPIN WKTYYKTWNR TRADLKAEQK RIEDIAESLC WEKKYEKGDT AIFRKKINDR SCDRSTPVNT CKRKDSDDVW YKEIETCVTP
201: FPKVSNEEEV AGGKLKKFPE RLFALPPSVS KGLVSGVDAE TYQEDVKLWK KRVGRYKRIN SLIGSTRYRN VMDMNAGLGG FAAALESPKS WVMNVVPTIT
301: KKTLSVVYER GLIGIYHDWC EGFSTYPRTY DFIHANGVFS MYQHSCKIED ILLEMDRILR PEGIVIIRDE VDVLNDVRKI ANGMRWDTKL MDHEDGPLVP
401: EKILYAVKQY WVAGDDANNQ SSSADSSEEE
Best Arabidopsis Sequence Match ( AT1G26850.1 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.