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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66535 Canola nucleus 73.82 45.19
CDY33299 Canola nucleus 51.12 33.94
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 59.1 30.9
CDY66721 Canola golgi 30.42 23.06
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 29.93 17.47
CDX94669 Canola endoplasmic reticulum 31.42 16.82
CDY44314 Canola endoplasmic reticulum 30.92 16.67
CDX99828 Canola golgi 30.67 16.4
CDY48339 Canola cytosol 30.67 16.27
CDX84330 Canola endoplasmic reticulum, plasma membrane 28.68 16.13
CDY31339 Canola plasma membrane 30.42 15.97
CDY39830 Canola plasma membrane 30.42 15.8
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 29.93 15.75
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 30.42 15.27
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 21.45 14.73
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 29.68 14.17
CDY24913 Canola mitochondrion 21.2 12.65
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 18.45 12.23
CDY07639 Canola endoplasmic reticulum 19.45 11.52
CDY24949 Canola endoplasmic reticulum, plasma membrane 19.2 11.39
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 18.7 11.36
CDY10370 Canola cytosol 7.73 11.27
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 18.2 11.27
CDX87530 Canola cytosol, golgi, peroxisome, plastid 18.2 11.25
CDX99540 Canola cytosol 14.96 11.17
CDY20475 Canola endoplasmic reticulum, golgi 18.45 10.74
CDX74837 Canola mitochondrion 18.45 10.74
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 15.71 10.55
CDX74348 Canola plastid 15.71 10.55
CDX98897 Canola golgi, mitochondrion 18.2 10.53
CDY07198 Canola mitochondrion 15.46 10.35
CDY67390 Canola mitochondrion 18.45 10.28
CDX70565 Canola endoplasmic reticulum 15.46 10.2
CDY26666 Canola mitochondrion 18.2 10.18
CDY46435 Canola endoplasmic reticulum, golgi 15.21 10.12
CDX70263 Canola plastid 14.71 9.97
CDY51142 Canola cytosol 15.21 9.89
CDX78577 Canola endoplasmic reticulum, golgi 14.96 9.87
CDX84046 Canola cytosol 14.96 9.8
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 14.96 9.79
CDX94861 Canola endoplasmic reticulum, golgi 14.71 9.78
CDY45006 Canola endoplasmic reticulum, golgi 14.71 9.75
CDY54063 Canola mitochondrion 13.47 9.75
CDY00911 Canola mitochondrion 14.21 9.74
CDY40268 Canola endoplasmic reticulum, golgi 14.71 9.74
CDX92981 Canola endoplasmic reticulum, golgi 14.71 9.74
CDY16198 Canola endoplasmic reticulum, golgi 14.71 9.74
CDY44966 Canola cytosol 14.96 9.68
CDY15505 Canola endoplasmic reticulum, golgi 14.96 9.68
CDX86634 Canola endoplasmic reticulum, golgi 14.96 9.68
CDX99539 Canola cytosol 14.96 9.6
CDY08621 Canola mitochondrion, plastid 13.97 9.59
CDX94256 Canola cytosol 14.71 9.53
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 14.71 9.52
CDX89824 Canola endoplasmic reticulum, golgi 14.71 9.52
CDY25257 Canola cytosol 14.71 9.52
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 14.46 9.49
CDY50730 Canola cytosol 11.72 9.48
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 14.71 9.34
CDY18904 Canola endoplasmic reticulum 14.71 9.32
CDY33300 Canola plastid 5.49 9.21
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 14.21 9.08
CDX76494 Canola endoplasmic reticulum, golgi 13.22 9.04
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 13.97 9.03
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 13.97 9.0
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 12.97 8.8
CDY12278 Canola endoplasmic reticulum, golgi 12.72 8.5
CDY22567 Canola endoplasmic reticulum, golgi 12.72 8.5
CDX85977 Canola cytosol 10.22 8.49
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 12.72 8.46
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 12.72 8.46
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 12.72 8.46
CDX70102 Canola cytosol 18.7 7.97
CDY68187 Canola mitochondrion 12.22 7.94
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 12.97 7.91
CDX93797 Canola cytosol 9.48 7.87
CDX98606 Canola vacuole 12.97 7.83
CDY61681 Canola endoplasmic reticulum, golgi 13.22 7.77
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 13.97 7.72
CDX78919 Canola cytosol, golgi 13.47 7.64
CDY27362 Canola plasma membrane 14.71 5.85
CDY70748 Canola cytosol, peroxisome 2.99 2.79
CDY01971 Canola endoplasmic reticulum, extracellular 2.0 1.92
CDX83493 Canola golgi 1.5 1.45
CDY57187 Canola cytosol 1.0 1.28
CDY43336 Canola cytosol 0.0 0.0
CDY70936 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-MapMan:35.1GO:A0A078K2W0UniProt:A0A078K2W0EnsemblPlants:CDY72237ProteinID:CDY72237
ProteinID:CDY72237.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00025945001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF944
InterPro:Put_SAM_MeTrfaseUniParc:UPI0004EF2562SEG:seg:::
Description
BnaC08g48790DBnaC08g48790D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K2W0]
Coordinates
chrLK049702:-:3..2185
Molecular Weight (calculated)
45759.7 Da
IEP (calculated)
4.558
GRAVY (calculated)
-1.495
Length
401 amino acids
Sequence
(BLAST)
001: MQDVKQGQDQ DSNTDVTYTD ATKEELPLEV GKRYASQKSK NQENGQQQQQ QEEQNLKSEE NGQQQQDDQN SKNEENGQQQ QQEDQNSKNQ ENGQQQQQEG
101: QNSKNEENGQ QQQQQQEDQN SGKEESGQQN MENNNMVNDE NVKEQKNMKD ENGQQDEQST TKEENVEQQQ AEQNDEKKQE GAGASGFGSG IPKESAESQK
201: SWKSQATESK DEKQRQTSES NNADSIMTGK AWELCNATAA YDYIPCLDNE EAIKKLTSRG HFEHRERHCP EDPPTCLVSL PEGYKESIKW PESRDKIWYH
301: NVPHTKLAEV KGHQNWVKVT GEFLTFPGGG TQFIHGALHY IDFLQQSVKS IAWESHGTMM GACFFWNLTG CLGQEVTLCG QQRQFTRSLK KMSKSGKVWF
401: E
Best Arabidopsis Sequence Match ( AT2G34300.1 )
(BLAST)
001: MAMGKYSRVD GKKSSSYGLT ITIVLLLSLC LVGTWMFMSS WSAPADSAGY SSTDTAKDVS KNDLRKEEGD RDPKNFSDEK NEENEAATEN NQVKTDSENS
101: AEGNQVNESS GEKTEAGEER KESDDNNGDG DGEKEKNVKE VGSESDETTQ KEKTQLEEST EENKSEDGNG NEEKAEENAS ETEESTEKSS KEVFPAGDQA
201: EITKESSTGD GAWSTQLVES QNEKKAQQSS ISKDQSSYGW KTCNVTAGPD YIPCLDNWQA IKKLHTTMHY EHRERHCPEE SPHCLVSLPD GYKRSIKWPK
301: SREKIWYNNV PHTKLAEIKG HQNWVKMSGE HLTFPGGGTQ FKNGALHYID FIQQSHPAIA WGNRTRVILD VGCGVASFGG YLFERDVLAL SFAPKDEHEA
401: QVQFALERGI PAMLNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKNEEDSGIW KAMSELTKAM CWKLVTIKKD
501: KLNEVGAAIY QKPTSNKCYN KRPQNEPPLC KDSDDQNAAW NVPLEACMHK VTEDSSKRGA VWPNMWPERV ETAPEWLDSQ EGVYGKPAPE DFTADQEKWK
601: TIVSKAYLND MGIDWSNVRN VMDMRAVYGG FAAALKDLKL WVMNVVPVDA PDTLPIIYER GLFGIYHDWC ESFNTYPRTY DLLHADHLFS TLRKRCNLVS
701: VMAEIDRILR PQGTFIIRDD METLGEVEKM VKSMKWKVKM TQSKDNEGLL SIEKSWWRPE ETETIKSAIA
Arabidopsis Description
Probable methyltransferase PMT25 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT31]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.