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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, golgi
Any Predictor:cytosol, endoplasmic reticulum, golgi
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017538.1-P Field mustard golgi, plasma membrane 97.93 98.2
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 82.21 95.82
CDY70748 Canola cytosol, peroxisome 48.14 81.16
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 68.97 80.65
VIT_02s0012g00580.t01 Wine grape endoplasmic reticulum, golgi 64.14 76.1
KRH57576 Soybean endoplasmic reticulum 61.66 72.92
KRH04297 Soybean endoplasmic reticulum 61.52 72.76
CDY50730 Canola cytosol 48.0 70.16
PGSC0003DMT400062230 Potato endoplasmic reticulum, golgi 58.21 68.51
Solyc08g077240.2.1 Tomato nucleus 58.07 68.34
CDY45006 Canola endoplasmic reticulum, golgi 56.0 67.11
CDY46435 Canola endoplasmic reticulum, golgi 55.72 67.0
Os10t0569300-01 Rice golgi 55.59 66.61
TraesCS1A01G213400.1 Wheat endoplasmic reticulum, golgi 55.31 66.39
CDY16198 Canola endoplasmic reticulum, golgi 55.31 66.17
TraesCS1B01G226800.1 Wheat endoplasmic reticulum, golgi 55.03 66.06
TraesCS1D01G216200.1 Wheat endoplasmic reticulum, golgi 55.03 66.06
CDY40268 Canola endoplasmic reticulum, golgi 55.17 66.01
KXG38879 Sorghum mitochondrion 54.34 65.23
Zm00001d030012_P001 Maize golgi 54.21 65.07
CDY70936 Canola cytosol 15.31 60.66
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 49.38 57.37
CDX85977 Canola cytosol 38.07 57.14
CDX93797 Canola cytosol 37.93 56.94
CDX94256 Canola cytosol 45.79 53.63
CDY25257 Canola cytosol 45.79 53.55
CDX84046 Canola cytosol 45.1 53.43
CDY01971 Canola endoplasmic reticulum, extracellular 30.62 53.37
CDX99539 Canola cytosol 45.79 53.12
CDY44966 Canola cytosol 45.38 53.06
CDX99540 Canola cytosol 38.76 52.33
CDY18904 Canola endoplasmic reticulum 43.59 49.92
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 43.31 49.68
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 43.03 49.68
CDY54063 Canola mitochondrion 37.52 49.1
CDX83493 Canola golgi 28.0 49.03
CDY57187 Canola cytosol 20.14 46.79
CDY43336 Canola cytosol 11.45 43.23
CDY12278 Canola endoplasmic reticulum, golgi 35.31 42.67
CDY22567 Canola endoplasmic reticulum, golgi 35.03 42.33
CDY68187 Canola mitochondrion 36.0 42.3
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 35.03 42.12
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 35.03 42.12
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 35.03 42.12
CDX76494 Canola endoplasmic reticulum, golgi 33.52 41.47
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 33.66 41.29
CDX74348 Canola plastid 33.24 40.37
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 33.1 40.2
CDY07198 Canola mitochondrion 32.97 39.9
CDY10370 Canola cytosol 14.62 38.55
CDY51142 Canola cytosol 32.69 38.41
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 33.66 37.14
CDX98606 Canola vacuole 33.93 37.05
CDY00911 Canola mitochondrion 29.52 36.58
CDY08621 Canola mitochondrion, plastid 29.38 36.47
CDY61681 Canola endoplasmic reticulum, golgi 33.52 35.63
CDX70565 Canola endoplasmic reticulum 29.79 35.53
CDX78577 Canola endoplasmic reticulum, golgi 29.79 35.53
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 28.55 35.45
CDX94861 Canola endoplasmic reticulum, golgi 29.24 35.16
CDX92981 Canola endoplasmic reticulum, golgi 29.38 35.15
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 29.1 34.88
CDX70263 Canola plastid 28.41 34.8
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 29.38 34.75
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 29.1 34.53
CDX86634 Canola endoplasmic reticulum, golgi 29.52 34.52
CDY15505 Canola endoplasmic reticulum, golgi 29.52 34.52
CDX78919 Canola cytosol, golgi 33.52 34.37
CDX89824 Canola endoplasmic reticulum, golgi 29.24 34.19
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 28.97 33.87
CDX87530 Canola cytosol, golgi, peroxisome, plastid 29.66 33.13
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 29.24 32.72
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 30.48 32.17
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 29.1 31.97
CDX98897 Canola golgi, mitochondrion 30.48 31.89
CDY07639 Canola endoplasmic reticulum 29.52 31.61
CDY24949 Canola endoplasmic reticulum, plasma membrane 29.38 31.51
CDX74837 Canola mitochondrion 29.79 31.35
CDY27362 Canola plasma membrane 43.31 31.12
CDY20475 Canola endoplasmic reticulum, golgi 29.52 31.06
CDY33299 Canola nucleus 25.79 30.96
CDX84330 Canola endoplasmic reticulum, plasma membrane 30.34 30.86
CDY24913 Canola mitochondrion 28.55 30.8
CDX99828 Canola golgi 31.03 30.0
CDY48339 Canola cytosol 31.17 29.89
CDY44314 Canola endoplasmic reticulum 30.48 29.7
CDX94669 Canola endoplasmic reticulum 30.34 29.37
CDY31339 Canola plasma membrane 30.76 29.19
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 30.62 29.13
CDY39830 Canola plasma membrane 30.48 28.63
CDY66535 Canola nucleus 25.79 28.55
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 30.07 27.28
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 30.07 25.95
CDY66721 Canola golgi 18.9 25.9
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 27.31 25.81
CDY67390 Canola mitochondrion 25.38 25.56
CDY26666 Canola mitochondrion 24.97 25.24
CDX70102 Canola cytosol 31.31 24.12
CDY72237 Canola nucleus 7.72 13.97
CDY33300 Canola plastid 1.24 3.77
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078HCG4UniProt:A0A078HCG4EnsemblPlants:CDY35169
ProteinID:CDY35169ProteinID:CDY35169.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00058063001PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF954InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EE6613
SEG:seg:::::
Description
BnaA09g18060DBnaA09g18060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCG4]
Coordinates
chrLK032347:+:232804..239836
Molecular Weight (calculated)
82509.1 Da
IEP (calculated)
9.376
GRAVY (calculated)
-0.298
Length
725 amino acids
Sequence
(BLAST)
001: MDIIPLSELL LNLSSQLRCH FQWSLVPELE IQRKEETFSI FQALLLHRRF IGLFCSSSSL SLLCLIKSSH VFEIFSAVMK SEKRHALVKK SWCIEISKVM
101: MMASSKNTPP VNNRTRISIT IVTGLCCFFY LLGAWQRNGF GKGGGVITLE AVTKQAQCTN TTDIVANLDF EPHHKTIKIP HRANPKPIMF KPCDVKFKDY
201: TPCHEQKRAM RFPRENMVYR ERHCPPENEK LRCLIPAPKG YTTPFPWPKS RDYVHYANVP FKTLTVAKAG QNWVKFQGDV FKFPGGGTMF PQGADAYIET
301: LAKVIPIKDG LVRTALDTGC GVASWGAYML KKNVLTMSFA PRDVHEAQVQ FALERGVPAI IGVLGSIRLP YPPRAFDMAQ CSRCLIPWTS NEGMYLMEVD
401: RVLRPGGYWV LSGPPINWKT YYKTWKRSKK ELKAEQKRIE EIAESLCWEK KYEKGDIAIW RKKTNDRSCR MSSSSSSVKT CKGKDTDDIW NKTMEVCVTP
501: FPKVSSDVEV KKFPERLFSV PPCVTKGLVE GVNVESYQED NKLWKKRVSN YKRINRLIGS SRYRNVMDMN AGLGGFAAAL ESSESWVMNV VPTIAKNSLS
601: VVFERGLIGI YHDWCEGFST YPRTYDLIHA NNVFSLYQNR CNVEDILLEM DRILRPEGTV ILRDEVDALN DVRKIAKGMR WDTKLMDHED GPLVPEKILV
701: AVKQYWVAGD GGNVRNSTST LSGEE
Best Arabidopsis Sequence Match ( AT4G18030.1 )
(BLAST)
001: MGSKHNPPGN NRSRSTLSLL VVVGLCCFFY LLGAWQKSGF GKGDSIAMEI TKQAQCTDIV TDLDFEPHHN TVKIPHKADP KPVSFKPCDV KLKDYTPCQE
101: QDRAMKFPRE NMIYRERHCP PDNEKLRCLV PAPKGYMTPF PWPKSRDYVH YANAPFKSLT VEKAGQNWVQ FQGNVFKFPG GGTMFPQGAD AYIEELASVI
201: PIKDGSVRTA LDTGCGVASW GAYMLKRNVL TMSFAPRDNH EAQVQFALER GVPAIIAVLG SILLPYPARA FDMAQCSRCL IPWTANEGTY LMEVDRVLRP
301: GGYWVLSGPP INWKTWHKTW NRTKAELNAE QKRIEGIAES LCWEKKYEKG DIAIFRKKIN DRSCDRSTPV DTCKRKDTDD VWYKEIETCV TPFPKVSNEE
401: EVAGGKLKKF PERLFAVPPS ISKGLINGVD EESYQEDINL WKKRVTGYKR INRLIGSTRY RNVMDMNAGL GGFAAALESP KSWVMNVIPT INKNTLSVVY
501: ERGLIGIYHD WCEGFSTYPR TYDFIHASGV FSLYQHSCKL EDILLETDRI LRPEGIVIFR DEVDVLNDVR KIVDGMRWDT KLMDHEDGPL VPEKILVATK
601: QYWVAGDDGN NSPSSSNSEE E
Arabidopsis Description
Probable methyltransferase PMT14 [Source:UniProtKB/Swiss-Prot;Acc:Q94EJ6]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.