Factsheet for TraesCS1B01G226800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	98.84	98.84
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	98.01	98.01
KXG38879	Sorghum	mitochondrion	85.26	85.26
Os10t0569300-01	Rice	golgi	84.6	84.46
Zm00001d030012_P001	Maize	golgi	84.44	84.44
HORVU1Hr1G054470.1	Barley	mitochondrion, plastid	82.62	79.97
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	71.19	70.38
KRH04297	Soybean	endoplasmic reticulum	70.03	69.0
KRH57576	Soybean	endoplasmic reticulum	69.54	68.52
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	69.54	68.4
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	67.05	65.75
Solyc08g077240.2.1	Tomato	nucleus	66.89	65.58
CDY70748	Canola	cytosol, peroxisome	46.69	65.58
AT4G18030.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	66.56	64.73
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	66.39	64.68
CDX78823	Canola	endoplasmic reticulum, golgi, vacuole	66.39	64.68
CDY03207	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	66.23	64.31
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	65.07	63.28
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	62.09	60.68
Bra017538.1-P	Field mustard	golgi, plasma membrane	66.06	55.19
CDY35169	Canola	cytosol, endoplasmic reticulum, golgi	66.06	55.03
TraesCS2B01G418400.1	Wheat	golgi	56.46	53.45
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	55.3	51.94
TraesCS6B01G029000.1	Wheat	cytosol	53.81	51.51
TraesCS3B01G427600.1	Wheat	cytosol	30.63	48.43
TraesCS2B01G419000.1	Wheat	golgi, plastid	41.56	43.43
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	42.38	40.19
TraesCS7B01G342700.1	Wheat	plastid	38.91	38.34
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	37.91	37.18
TraesCS1B01G250100.1	Wheat	plasma membrane	34.27	34.79
TraesCS3B01G395100.1	Wheat	plastid	35.43	30.27
TraesCS1B01G305900.1	Wheat	mitochondrion	33.28	30.13
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	38.91	29.27
TraesCS3B01G380800.1	Wheat	plastid	33.77	28.41
TraesCS5B01G413400.3	Wheat	mitochondrion	31.13	26.04
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	34.93	23.55
TraesCS7B01G286500.1	Wheat	mitochondrion	34.6	22.87
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	35.26	20.9

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005802	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009505
GO:GO:0016020	GO:GO:0016740	GO:GO:0030312	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF954
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G226800	EnsemblPlants:TraesCS1B01G226800.1

Description

No Description!

Coordinates

chr1B:-:407544331..407546997

Molecular Weight (calculated)

69008.1 Da

IEP (calculated)

8.405

GRAVY (calculated)

-0.433

Length

604 amino acids

Sequence
(BLAST)

001: MRGSRMNPDR RTRSIMSVVI VMGLCCFFYI LGAWQKSGTG RGDSIALRVT KETDCTILPN LHFETHHSMG GVNPLIMNNK VFKPCHIRYR DYTPCQDQNR
101: AMTFPRENMT YRERHCPAEN EKLHCLIPAP KGYVTPFAWP KSREYVPYAN APYKSLTVEK AVQNWIQHQG DVFHFPGGGT MFPNGASSYI DELASVIPLT
201: DGTIRTALDT GCGVASWGAY LMDRNILTMS FAPRDSHEAQ VQFALERGVP AVIGVLGTMK LPYPSRSFDM AHCSRCLIPW KSNDGMYMME VDRVLRPGGY
301: WILSGPPINW KKYYKTWQRS KQDSEEEQNR IENIAEMLCW NKIYEKEDTV IWQKKANSNA CHNKNGRTSK MCNVQDADDI WYKKMETCIT PIPEGAQQLQ
401: KFPQRLFAVP PRILEGTPGV TEEVYEEDKK LWKKHVDTYK RVNKLIGKSR YRNIMDMNAG LGSFAAVLDS PGSWVMNVVP TISERNTLGI IYERGLIGIY
501: HDWCEAFSTY PRTYDLIHAS GVFSLYENKC DLEDILLEMD RILRPEGAVI LRDNVEVLNK VRSTVTGMRW KSKLLDHEDG PLVPEKLLIA VKTYWVGSKE
601: GSSP

Best Arabidopsis Sequence Match ( AT1G26850.1 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.