Factsheet for TraesCS5B01G120300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

golgi 1
mitochondrion 2
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	95.49	95.67
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	93.62	91.82
HORVU5Hr1G037320.6	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	82.83	90.56
Os12t0178300-00	Rice	cytosol	18.74	72.08
CDY43336	Canola	cytosol	11.87	63.02
Bra010830.1-P	Field mustard	golgi	39.45	58.94
CDX90190	Canola	golgi, mitochondrion, plasma membrane, plastid, vacuole	39.65	58.81
CDX84330	Canola	endoplasmic reticulum, plasma membrane	39.74	56.8
CDY31339	Canola	plasma membrane	41.81	55.76
CDY39830	Canola	plasma membrane	41.41	54.66
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	42.69	54.17
CDX99828	Canola	golgi	39.74	54.0
CDY66721	Canola	golgi	27.97	53.88
Zm00001d041844_P021	Maize	golgi, mitochondrion, nucleus, plasma membrane, plastid	55.54	53.6
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	47.1	53.57
CDX94669	Canola	endoplasmic reticulum	39.35	53.54
CDY44314	Canola	endoplasmic reticulum	39.06	53.49
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	39.35	53.47
CDY48339	Canola	cytosol	39.65	53.44
CDY17234	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	39.84	53.28
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	39.74	53.15
KXG23110	Sorghum	endoplasmic reticulum	56.72	53.12
Bra032319.1-P	Field mustard	cytosol	39.25	53.12
AT1G29470.1	Thale cress	golgi	40.14	53.12
KRH64022	Soybean	endoplasmic reticulum	42.0	52.84
KRH53915	Soybean	endoplasmic reticulum	41.61	52.61
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	41.22	52.57
VIT_04s0044g01670.t01	Wine grape	cytosol	42.49	52.48
AT2G34300.3	Thale cress	endoplasmic reticulum, golgi, vacuole	39.65	52.47
Solyc05g056580.2.1	Tomato	golgi	41.41	51.91
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	42.0	51.63
PGSC0003DMT400059933	Potato	golgi	41.12	51.54
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	38.08	50.52
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	41.41	50.24
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	40.92	50.18
KRH40943	Soybean	golgi	41.02	49.64
PGSC0003DMT400006139	Potato	nucleus	38.08	48.68
VIT_18s0001g01270.t01	Wine grape	plasma membrane	41.81	48.52
KRH64591	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.35	48.08
KRH53330	Soybean	endoplasmic reticulum	38.96	47.54
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	40.53	44.22
TraesCS7B01G286500.1	Wheat	mitochondrion	38.67	43.11
TraesCS1B01G305900.1	Wheat	mitochondrion	27.28	41.68
TraesCS3B01G380800.1	Wheat	plastid	27.77	39.41
TraesCS2B01G419000.1	Wheat	golgi, plastid	21.69	38.24
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	22.08	36.53
TraesCS3B01G427600.1	Wheat	cytosol	13.54	36.13
TraesCS7B01G342700.1	Wheat	plastid	21.69	36.05
TraesCS5B01G413400.3	Wheat	mitochondrion	25.52	36.01
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	22.67	35.93
TraesCS1B01G250100.1	Wheat	plasma membrane	20.9	35.8
TraesCS3B01G395100.1	Wheat	plastid	24.83	35.78
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	21.69	35.76
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	21.39	35.5
TraesCS2B01G418400.1	Wheat	golgi	22.08	35.27
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	20.9	35.26
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	21.3	34.94
TraesCS6B01G029000.1	Wheat	cytosol	21.2	34.23
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	20.8	33.28

Protein Annotations

EnsemblPlants:TraesCS5B01G120300.1	EnsemblPlantsGene:TraesCS5B01G120300	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF1062	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TIGR:cd02440	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:213248756..213252006

Molecular Weight (calculated)

110464.0 Da

IEP (calculated)

4.442

GRAVY (calculated)

-0.695

Length

1019 amino acids

Sequence
(BLAST)

0001: MPLFDRDRYQ RLPLDVGGGG ARRPTSSCAT ATVVLFVGLC LVAAWMMAPT SNVPMGVSPD KAGEDTDVGL TRSVVKGGDA DMTPATDKAA KEDKDGGPAV
0101: QTTEVDQSAE ATDADANSTT AGKPDGDTVA GAESPSKNLA FSHDSGMTEG GGVAKPEEDP DKNVQNNTEE ATTDKGAEDA STDTNQSGGN TAEQNTKEAT
0201: TDKSAEDAST GTNQSGGNNA EQNTEEAMTD KSAEDASTGT NQSGGNNAEQ NTEEATTDKS AEDASTGTNQ SGGNNAEQNT EEAPRDTTDT GDQIDKSSDT
0301: TETGGQGEKN VEAAPTEKKG ETEDNITNKN AEETPAYAKE AGDDGTEKNQ TAFDDRTGDD AATGAASKNQ TFVDKDTPRN QTSTTVEDTL SEEDGMVLTN
0401: SSTITQGEEE RPVTEPVTGG DTETAELLPS GQAELLNETT TAEQDVTFPT QATESSEEKA RNSRNKEHKN KGNLVVVVGE SSTEEASNVW KLCNTSAGAD
0501: YIPCLDNEAA IKGLKSNKHY EHRERHCPSP APSCLVPLPE GYRQPIPWPE SRERIWYHNV PHTKLALYKG HQNWVKVSDD GEHLVFPGGG TQFLNGASHY
0601: IDVIQEALPA VAWGTRSRVA LDVGCGVASF GGYLFDKDVL SMSFAPKDEH EAQVQFALER GIPAISAVMG TKRLPFPGGA YDVVHCARCR VPWHIEGGKL
0701: LLEANRLLRA GGLFVWSATP VYRKDAENVG IWQAMVALTK SMCWEMVTRT SDTVDQTAMV IFKKPSSNEC YSKRSGAEPP LCEESDDPNA AWNVTLQACM
0801: HRVATEPAAR GSRWPEQWPE RLTAAPYWLN ESQVGVYGKP AADDLAADTE HWREAVNSSY LSGMGIEWKN VRNVIDMRSV YGGLAAALRD MKVWVMNIVP
0901: VESPDTLPII YERGLLGMYH DWCESLSTYP RSYDLVHADH LFSKLKYRCK VRLVMAEVDR ILRPEGKMIL RDDRETAEEV ERIAKSLHWE VRMAVSNEGE
1001: RLLCFHKTMW RPTQVQPLG

Best Arabidopsis Sequence Match ( AT1G29470.1 )
(BLAST)

001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA

Arabidopsis Description

Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.