Factsheet for TraesCS1B01G213600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	94.35	98.85
HORVU1Hr1G051470.3	Barley	endoplasmic reticulum	93.09	97.05
TraesCS1A01G198600.1	Wheat	golgi	94.35	95.7
Os04t0218400-00	Rice	cytosol	19.31	84.25
EER94413	Sorghum	plasma membrane	74.88	77.81
GSMUA_Achr4P27550_001	Banana	extracellular, plasma membrane	66.88	73.83
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	66.88	73.83
KRH76381	Soybean	cytosol, golgi, plasma membrane	63.74	68.01
GSMUA_Achr4P18470_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	63.74	67.89
Solyc08g075870.2.1	Tomato	nucleus, unclear	63.58	67.84
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	63.58	67.84
PGSC0003DMT400079286	Potato	cytosol	63.27	67.5
CDY09274	Canola	cytosol, endoplasmic reticulum, golgi	62.48	67.34
VIT_02s0033g01120.t01	Wine grape	cytosol	63.42	67.33
CDX76494	Canola	endoplasmic reticulum, golgi	61.85	67.24
Solyc08g005490.2.1	Tomato	nucleus, unclear	62.95	67.17
KRH07206	Soybean	cytosol, golgi, plasma membrane	62.64	66.72
AT4G19120.2	Thale cress	cytosol, endoplasmic reticulum, golgi	62.79	66.67
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	62.64	66.39
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	62.01	66.28
KRH07708	Soybean	cytosol	62.17	66.22
CDY12278	Canola	endoplasmic reticulum, golgi	62.32	66.17
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	62.32	66.17
KRH39668	Soybean	endoplasmic reticulum	61.85	66.0
CDY22567	Canola	endoplasmic reticulum, golgi	61.7	65.5
CDY47694	Canola	cytosol, endoplasmic reticulum, golgi	61.85	65.34
CDY47695	Canola	cytosol, endoplasmic reticulum, golgi	61.85	65.34
CDY67792	Canola	cytosol, endoplasmic reticulum, golgi	61.85	65.34
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	61.07	64.51
AT1G31850.3	Thale cress	cytosol, endoplasmic reticulum, golgi	60.75	64.18
KRH07208	Soybean	cytosol	59.5	62.75
CDY01583	Canola	endoplasmic reticulum, plasma membrane, vacuole	62.79	60.88
CDX98606	Canola	vacuole	62.79	60.24
CDY61681	Canola	endoplasmic reticulum, golgi	62.64	58.5
GSMUA_Achr5P18010_001	Banana	nucleus	66.88	56.95
CDX78919	Canola	cytosol, golgi	63.11	56.86
Bra013374.1-P	Field mustard	cytosol, golgi	62.95	56.72
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	43.96	43.55
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	41.76	43.32
TraesCS2B01G418400.1	Wheat	golgi	43.01	42.95
TraesCS6B01G029000.1	Wheat	cytosol	42.23	42.63
TraesCS3B01G427600.1	Wheat	cytosol	25.43	42.41
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	40.19	42.38
TraesCS2B01G419000.1	Wheat	golgi, plastid	37.99	41.87
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	39.72	40.74
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	38.78	39.97
TraesCS7B01G342700.1	Wheat	plastid	35.16	36.54
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	33.75	34.9
TraesCS1B01G250100.1	Wheat	plasma membrane	31.24	33.45
TraesCS3B01G395100.1	Wheat	plastid	34.22	30.83
TraesCS1B01G305900.1	Wheat	mitochondrion	31.55	30.13
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	36.89	29.27
TraesCS3B01G380800.1	Wheat	plastid	31.55	27.99
TraesCS5B01G413400.3	Wheat	mitochondrion	28.89	25.48
TraesCS7B01G286500.1	Wheat	mitochondrion	34.38	23.96
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	33.12	23.55
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	33.28	20.8
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	5.18	11.07

Protein Annotations

EnsemblPlants:TraesCS1B01G213600.1	EnsemblPlantsGene:TraesCS1B01G213600	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF984	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr1B:+:388008684..388010682

Molecular Weight (calculated)

71046.4 Da

IEP (calculated)

8.722

GRAVY (calculated)

-0.336

Length

637 amino acids

Sequence
(BLAST)

001: MKYSKEAKPE RAGGGGGGAR AVPVALMLLL LCGFSFYLGG MYSTGRTFTF SSTTTSIIPI VSTAKQEGSA IALAIARNGN GDDEVEFSEC PADYQDYTPC
101: TDPKRWRRYG NYRLSFMERH CPPPPERAVC LVPPPRGYKP PIRWPKSKDQ CWYRNVPYDW INSQKSNQHW LRKDGDRFTF PGGGTMFPNG VGAYVDLMAD
201: LIPGMKDGSV RTALDTGCGV ASWGGDLLAR NILTVSLAPR DNHEAQVQFA LERGIPAILG IISTQRLPIP SASMDMAHCS RCLIPWTEFG GLYLMEIQRV
301: LRPGGFWVLS GPPINYENRW HGWNTTVEAQ KADFDRLKKM LASMCFRLYN KKGDIAVWQK SLDAGCYDKL TPVTTPAKCD DSVDADAAWY VPMRSCVTAP
401: SPKSRGKALP KWPQRLSVAP ERVSVVPGGS GSAMKHDDGK WKAATKHYKA LLPALGSDKV RNVMDMSAVY GGFAASLVKD PVWVMNVVSS YGPNSLGVVY
501: DRGLIGTNHD WCEAFSTYPR TYDLLHADGL FTAESHRYVM CCRILPPTYS AKEDLKLLTD CPWHCRCEMK FVLVEMDRIL RPTGYAIIRD NPYFLDSVAS
601: IAKGMRWTCD RHDTENKENE KEKLLICHKQ LWSAKKA

Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)

001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN

Arabidopsis Description

ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.