Factsheet for TraesCS4B01G098500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G220000.1	Wheat	golgi	96.09	96.31
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	95.98	96.3
HORVU4Hr1G017470.1	Barley	vacuole	93.75	94.17
Os11t0186300-01	Rice	plasma membrane	68.86	71.16
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	68.86	69.02
Zm00001d004720_P001	Maize	golgi	68.64	67.88
CDY43336	Canola	cytosol	13.95	65.1
Bra010830.1-P	Field mustard	golgi	44.75	58.8
CDX90190	Canola	golgi, mitochondrion, plasma membrane, plastid, vacuole	44.75	58.37
CDY31339	Canola	plasma membrane	47.77	56.02
CDX84330	Canola	endoplasmic reticulum, plasma membrane	44.53	55.96
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	50.0	55.79
CDY39830	Canola	plasma membrane	47.54	55.18
KRH53915	Soybean	endoplasmic reticulum	49.22	54.71
KRH64022	Soybean	endoplasmic reticulum	49.22	54.44
CDY44314	Canola	endoplasmic reticulum	45.2	54.44
CDX94669	Canola	endoplasmic reticulum	45.42	54.34
AT1G29470.1	Thale cress	golgi	46.65	54.29
CDX99828	Canola	golgi	45.42	54.27
Bra032319.1-P	Field mustard	cytosol	45.54	54.18
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	45.31	54.13
CDY48339	Canola	cytosol	45.65	54.1
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	50.11	54.03
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	47.88	53.69
AT2G34300.3	Thale cress	endoplasmic reticulum, golgi, vacuole	45.98	53.51
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	49.44	53.44
Solyc05g056580.2.1	Tomato	golgi	48.44	53.38
VIT_04s0044g01670.t01	Wine grape	cytosol	49.0	53.21
CDY17234	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	45.2	53.15
PGSC0003DMT400059933	Potato	golgi	48.21	53.14
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	44.98	52.89
KRH40943	Soybean	golgi	49.44	52.61
CDY66721	Canola	golgi	31.03	52.55
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	44.2	51.56
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	48.33	51.55
PGSC0003DMT400006139	Potato	nucleus	44.31	49.81
VIT_18s0001g01270.t01	Wine grape	plasma membrane	47.43	48.41
KRH64591	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.53	47.84
KRH53330	Soybean	endoplasmic reticulum	44.08	47.31
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	53.57	47.1
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	46.99	45.07
TraesCS7B01G286500.1	Wheat	mitochondrion	44.2	43.33
TraesCS1B01G305900.1	Wheat	mitochondrion	31.81	42.73
TraesCS3B01G380800.1	Wheat	plastid	31.36	39.14
TraesCS1B01G250100.1	Wheat	plasma membrane	25.11	37.82
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	25.78	37.5
TraesCS2B01G419000.1	Wheat	golgi, plastid	23.66	36.68
TraesCS3B01G395100.1	Wheat	plastid	28.79	36.49
TraesCS7B01G342700.1	Wheat	plastid	24.89	36.38
TraesCS5B01G413400.3	Wheat	mitochondrion	29.13	36.15
TraesCS3B01G427600.1	Wheat	cytosol	15.4	36.13
TraesCS6B01G029000.1	Wheat	cytosol	25.33	35.97
TraesCS2B01G418400.1	Wheat	golgi	25.56	35.89
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	24.55	35.6
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	24.33	35.5
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	24.22	34.94
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	23.55	34.93
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	24.89	34.68
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	23.55	33.12

Protein Annotations

EnsemblPlants:TraesCS4B01G098500.1	EnsemblPlantsGene:TraesCS4B01G098500	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	ncoils:Coil
PANTHER:PTHR10108	PANTHER:PTHR10108:SF1057	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:103771839..103774618

Molecular Weight (calculated)

99044.9 Da

IEP (calculated)

5.957

GRAVY (calculated)

-0.528

Length

896 amino acids

Sequence
(BLAST)

001: MALFDRNQRP RSSLFSTATI VVFAALCLVG FWMVTPPSPE AVPAATATAS TADVKKAAEA VVKEKEEDRS IDATNNFKQD SANVVAEATT AAVEAEKPTV
101: DAKGGEADGE KPASKNQSFD DENGRTEGGE LVKPETAETD GAAAAAAAVA ASQGKSVEDT VTDFKEQAST DTKETVGSGG QDANTEKTPA DTKESIVSQE
201: ENPKEAAGGG SSKKQTFDDE NGKMEGVDVV KDDGNKTFIS EDNAKPIMEE TTTAATDKME DAAAVGISTE ASSVTNPDDT KRSDIVEEDQ KLLPEPLPNG
301: QAELLTEPAA QNGSFTTQAA ESTNEQKTRA EKNKNKKKKK KAASKAEAEP EREPEAAVLS PAHVWKLCNT STGEDYIPCL DNEAAIKKLK TDIHYEHRER
401: HCPAHPPTCL VPAPPSYKDP IRWPVSRSKI WYHNVPHTQL AEFKKRQNWV KVSGEYLTFP GGGTQFKTGG ALHYIDLIQQ AFPEVAWGRR SRVVLDVGCG
501: VASFGGFMFE RGVLTMSFAP KDEHEAQVQF ALERGIPAIS AVMGTKRLQF PSNVFDIVHC ARCRVPWHIN GGLLLLEVNR LVRPGGFFVW SATPVYQKLA
601: EDVEIWGEMV KLTKAMCWEM VAKTRDTIDR VGLVIFRKPM SNHCYETRRQ TEPPLCHPSD DPNAAWNISL RACMHRVPTD PSVRGSRWPQ PWPERAEKVP
701: YWLNSSQVGV YGKAAPEDFA ADYAHWKKVV QNSYLAGMGI EWKSVRNVMD MRAVYGGLAA ALRDMNVWVM NTVNIDSPDT LPVIYERGMF GIYHDWCESF
801: STYPRSYDLL HADHLFSKLK ARCKVLPVLV EVDRILRPNG KLIVRDDKET VDEIVEGVRS MHWEVRMTVS KHKEAMLCAR KTMWRPTEME PGPPTR

Best Arabidopsis Sequence Match ( AT1G29470.1 )
(BLAST)

001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA

Arabidopsis Description

Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.