Factsheet for Solyc05g056580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
mitochondrion 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059933	Potato	golgi	97.54	97.54
GSMUA_Achr8P32550_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	56.7	68.91
KRH53915	Soybean	endoplasmic reticulum	67.4	67.99
KRH64022	Soybean	endoplasmic reticulum	67.16	67.41
Os12t0178300-00	Rice	cytosol	21.65	66.42
CDY31339	Canola	plasma membrane	62.36	66.36
CDY39830	Canola	plasma membrane	62.98	66.32
GSMUA_Achr7P23260_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	59.16	65.89
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	67.04	65.58
KRH40943	Soybean	golgi	66.91	64.61
Zm00001d002943_P002	Maize	plasma membrane	53.14	64.38
Os04t0692400-01	Rice	mitochondrion, peroxisome	53.51	64.25
VIT_04s0044g01670.t01	Wine grape	cytosol	65.19	64.24
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	64.21	62.97
EES11713	Sorghum	plastid	54.12	62.32
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	61.01	62.08
GSMUA_Achr8P30140_001	Banana	nucleus	59.66	61.55
TraesCS2D01G569900.1	Wheat	plastid	53.01	61.31
TraesCSU01G022400.1	Wheat	plastid	53.01	61.13
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	62.98	60.95
EES03991	Sorghum	plastid	59.04	60.68
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	59.53	60.27
HORVU3Hr1G090970.1	Barley	cytosol, golgi, mitochondrion, plastid, vacuole	59.53	59.9
TraesCS3D01G401300.2	Wheat	golgi	59.16	59.9
Zm00001d012211_P008	Maize	plastid	58.18	59.72
Os01t0883900-02	Rice	golgi, mitochondrion, plasma membrane, vacuole	59.16	59.68
TraesCS3A01G406100.1	Wheat	plastid	59.29	59.65
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	55.47	58.72
GSMUA_Achr11P...	Banana	mitochondrion	59.41	57.98
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	52.52	57.7
HORVU2Hr1G127220.1	Barley	cytosol	53.01	55.47
GSMUA_Achr8P08230_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	59.16	54.85
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	61.62	53.64
Os11t0186300-01	Rice	plasma membrane	55.1	51.67
HORVU4Hr1G017470.1	Barley	vacuole	53.63	48.88
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	53.51	48.71
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	53.38	48.44
TraesCS4A01G220000.1	Wheat	golgi	53.14	48.32
Solyc02g084670.2.1	Tomato	unclear	52.4	48.24
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	52.89	48.1
Zm00001d004720_P001	Maize	golgi	53.51	48.01
HORVU5Hr1G037320.6	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.41	44.85
Solyc06g051000.2.1	Tomato	plastid	35.3	44.7
Zm00001d041844_P021	Maize	golgi, mitochondrion, nucleus, plasma membrane, plastid	55.1	42.42
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	52.03	41.59
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	51.91	41.41
KXG23110	Sorghum	endoplasmic reticulum	54.49	40.72
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	51.78	40.52
Solyc09g090190.2.1	Tomato	nucleus	30.5	40.13
Solyc03g005600.2.1	Tomato	nucleus, unclear	30.01	39.35
Solyc02g067890.2.1	Tomato	nucleus	29.03	38.69
Solyc03g116150.2.1	Tomato	nucleus	27.55	38.36
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	36.16	37.69
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	31.37	37.61
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	28.17	37.42
Solyc08g075870.2.1	Tomato	nucleus, unclear	27.43	37.35
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	28.17	37.24
Solyc01g091640.2.1	Tomato	nucleus	27.31	37.06
Solyc08g005490.2.1	Tomato	nucleus, unclear	27.18	37.02
Solyc04g080360.2.1	Tomato	nucleus	35.3	36.89
Solyc10g079450.1.1	Tomato	plasma membrane	27.55	36.66
Solyc01g010870.2.1	Tomato	nucleus, unclear	27.31	36.57
Solyc08g077240.2.1	Tomato	nucleus	27.55	36.36
Solyc01g009600.2.1	Tomato	plastid	27.8	35.65
Solyc06g035790.2.1	Tomato	plastid	28.17	35.18
Solyc08g013740.2.1	Tomato	unclear	27.18	35.02
Solyc01g091690.2.1	Tomato	plastid	27.18	34.75
Solyc04g058180.2.1	Tomato	plastid	27.31	34.37
Solyc03g026120.2.1	Tomato	plastid	27.43	34.31

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:K4C2Y2
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1060	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc05g056580.2	EnsemblPlants:Solyc05g056580.2.1	TMHMM:TMhelix	UniParc:UPI0002765928	:	:

Description

No Description!

Coordinates

chr5:-:65826429..65830771

Molecular Weight (calculated)

90818.1 Da

IEP (calculated)

4.909

GRAVY (calculated)

-0.657

Length

813 amino acids

Sequence
(BLAST)

001: MALGKYSRVD GRKSSNYCST VTIVVFVALC LVGVWMMTSS SVVPDQNLDL SSQGKKTDLS TQVTEGKESY NGGNESNNKA GDESNPTDEG KSKQFEDTLG
101: DLPEDATKGD ALVSQEENVS NPQQTESTSE VKQEEKSTEQ KEDAGESESE TQSEKATDGS DDKKEDGPNK VDDKDSEAGE KTENKSVGEE IKEGSDEKKS
201: IENSVELNDK KDQEVGQSSD EKSDGEKKDL SSSAVLSSGT QSDLLNETTT QNGAFLTQAS ESKNEKEMQK SSESDKESSY IWKLCNSTAG PDYIPCLDNL
301: EAIRNLRSTK HYEHRERHCP DNPPTCLVPL PEGYQHSVEW PTSREKIWYH NVPHTKLAEI KGHQNWVKVS GEYLTFPGGG TQFKHGALHY IDFIQQSFPE
401: IAWGKQTRVI LDVGCGVASF GGYLFERDVL AMSLAPKDEH EAQVQFALER GIPAISAVMG TKRLPFPSRV FDVVHCARCR VPWHIEGGKL LLELNRVLRP
501: GGLFVWSATP VYQKLPEDVE IWEAMQKLTK AMCWDLVSKT KDRVNGVGVA VYRKPTSNEC YEQRSKDAPP ICQGSDDPNA AWNVPLQACM HKAPVATSER
601: GSQWPEPWPA RLSKSPYWLL SSQVGVYGKP APEDFTADYE HWKHVVTNSY LNGMGINWST VRNVMDMRAI YGGFAAALRD LNVWVMNVVS VDAPDTLPII
701: YERGLFGIYH DWCESFSTYP RSYDLVHADH LFSKIKTKCG LPAIVAEVDR ILRPGGKLIV RDKEETITEL ESMLKSMQYE INMTYSKDKE GLLYCQKTMW
801: RPKDVETLTY AIA

Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)

001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG

Arabidopsis Description

Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.