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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002943_P002 Maize plasma membrane 88.67 93.29
Os04t0692400-01 Rice mitochondrion, peroxisome 73.51 76.66
TraesCSU01G022400.1 Wheat plastid 74.79 74.89
TraesCS2D01G569900.1 Wheat plastid 74.22 74.54
TraesCS2A01G560300.1 Wheat mitochondrion, peroxisome, plastid 73.65 70.27
CDY43336 Canola cytosol 18.7 68.75
HORVU2Hr1G127220.1 Barley cytosol 73.37 66.67
Bra010830.1-P Field mustard golgi 58.36 60.41
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 58.36 59.97
EES03991 Sorghum plastid 65.01 58.03
CDY31339 Canola plasma membrane 62.61 57.85
CDY39830 Canola plasma membrane 62.61 57.25
CDX84330 Canola endoplasmic reticulum, plasma membrane 56.94 56.38
CDY44314 Canola endoplasmic reticulum 58.64 55.65
KRH53915 Soybean endoplasmic reticulum 63.31 55.46
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 58.64 55.2
CDX94669 Canola endoplasmic reticulum 58.5 55.14
CDX99828 Canola golgi 58.22 54.8
CDY48339 Canola cytosol 58.64 54.76
Bra032319.1-P Field mustard cytosol 58.22 54.58
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 61.76 54.57
KRH64022 Soybean endoplasmic reticulum 62.61 54.57
PGSC0003DMT400059933 Potato golgi 62.75 54.49
AT1G29470.1 Thale cress golgi 59.07 54.16
Solyc05g056580.2.1 Tomato golgi 62.32 54.12
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 58.78 54.04
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 63.31 53.92
CDY66721 Canola golgi 39.94 53.31
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 57.37 53.15
VIT_04s0044g01670.t01 Wine grape cytosol 62.04 53.09
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 57.22 53.02
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 62.61 52.62
PGSC0003DMT400006139 Potato nucleus 59.21 52.45
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 57.08 52.34
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 61.47 52.23
KRH40943 Soybean golgi 60.76 50.95
VIT_18s0001g01270.t01 Wine grape plasma membrane 62.18 50.0
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 58.92 49.88
KRH53330 Soybean endoplasmic reticulum 58.07 49.1
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 60.48 47.76
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 60.48 45.72
OQU77087 Sorghum mitochondrion 55.95 42.8
OQU91634 Sorghum endoplasmic reticulum, golgi 35.84 41.07
KXG23110 Sorghum endoplasmic reticulum 60.34 39.15
OQU87776 Sorghum endoplasmic reticulum, golgi 37.11 38.7
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 32.01 38.57
EES03874 Sorghum mitochondrion 36.97 37.94
EER89033 Sorghum cytosol 33.0 37.58
EER93951 Sorghum peroxisome 33.43 37.05
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 31.87 36.89
EER96732 Sorghum endoplasmic reticulum, golgi 32.15 36.73
OQU77908 Sorghum plasma membrane, plastid 32.29 36.72
KXG26943 Sorghum plastid 32.72 36.04
KXG38879 Sorghum mitochondrion 30.74 35.93
EES05735 Sorghum mitochondrion, plastid 33.43 35.44
EER94413 Sorghum plasma membrane 30.74 35.4
EES08791 Sorghum golgi 31.3 35.02
OQU88046 Sorghum plastid 28.61 32.58
EER93372 Sorghum mitochondrion 37.68 20.31
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EntrezGene:8064302UniProt:C5YB55EnsemblPlants:EES11713ProteinID:EES11713
ProteinID:EES11713.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0032259PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1055
InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3006G281000SUPFAM:SSF53335unigene:Sbi.13804TMHMM:TMhelix
UniParc:UPI0001A870E7RefSeq:XP_002447385.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr6:+:61082550..61087360
Molecular Weight (calculated)
80443.6 Da
IEP (calculated)
6.600
GRAVY (calculated)
-0.475
Length
706 amino acids
Sequence
(BLAST)
001: MAFGHTRLDV RRAPQSSYFS CSTTTVAVFV ALCLVAVWMA SSMLVTPTEF SPFQPKVRPL PPQDSPPDTG SLTSAGQDDG IREMERDVPV DPPPVTQQLP
101: PVTDSMDSED QQEDVKEQVR KPDRQRTSEQ PEVFPDGSQA ELFNETTTER GPWQTKAAQS NKDAKEQTLT SSSPVSFTWV LCNVDAGTDY IPCLDNTEAI
201: KKLRSTKHYE HRERHCPEKP PTCLVPLPEG YRNRIRWPKS RDQIWYNNVP HTKLVEYKGH QNWVKVSGEY LIFPGGGTQF KHGALHYIDF IQEAKKDVAW
301: GKRSRVVLDV GCGVASFGGY LFDRDVITMS FAPKDEHEAQ VQFALERGIP AISAVMGTKR LPFSSRVFDV VHCARCRVPW HIEGGKLLLE LDRLLRPGGY
401: FVWSATPVYQ KLPEDVEIWQ AMSALTSSMC WKMVNKVKDR VNRVGIAIYR KPTDNSCYEA RSETNPPLCG EYDDPDAAWN ISLGACMHKL PVDPTIRGSQ
501: WPELWPLRLE KPPYWLRGSE AGVYGKPAPE DFQADYEHWK RVVSNSYMNG LGIDWSSVRN VMDMKAVYAG FAAALRNLKV WVMNVVPIDS PDTLPIIYER
601: GLFGLYHDWC ESFSTYPRTY DLLHANHLFS KVKKRCELLP VIVEVDRVLR PEGRLIVRDN IETISEVENI VKSLHWEVHM SYSQDKEGLL FVQKTTWRPN
701: ETEDKL
Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)
001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG
Arabidopsis Description
Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.