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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os04t0218400-00 Rice cytosol 20.72 86.99
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 78.47 78.72
TraesCS1D01G202300.2 Wheat endoplasmic reticulum 77.98 78.62
GSMUA_Achr4P27550_001 Banana extracellular, plasma membrane 72.27 76.78
TraesCS1A01G198600.1 Wheat golgi 78.14 76.27
TraesCS1B01G213600.1 Wheat endoplasmic reticulum 77.81 74.88
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 69.82 74.18
GSMUA_Achr4P18470_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 68.35 70.07
Solyc08g005490.2.1 Tomato nucleus, unclear 68.19 70.02
PGSC0003DMT400047515 Potato cytosol, golgi, plasma membrane 68.19 70.02
KRH76381 Soybean cytosol, golgi, plasma membrane 68.03 69.85
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 66.56 69.04
CDX76494 Canola endoplasmic reticulum, golgi 65.91 68.94
Solyc08g075870.2.1 Tomato nucleus, unclear 67.05 68.84
VIT_02s0033g01120.t01 Wine grape cytosol 67.37 68.83
PGSC0003DMT400079286 Potato cytosol 66.88 68.68
Bra012557.1-P Field mustard cytosol, golgi, nucleus 67.21 68.55
KRH39668 Soybean endoplasmic reticulum 66.56 68.34
AT4G19120.2 Thale cress cytosol, endoplasmic reticulum, golgi 66.39 67.83
CDY12278 Canola endoplasmic reticulum, golgi 66.23 67.67
Bra020975.1-P Field mustard endoplasmic reticulum, golgi 65.74 67.62
KRH07206 Soybean cytosol, golgi, plasma membrane 65.91 67.56
Bra023213.1-P Field mustard endoplasmic reticulum, golgi 66.07 67.5
AT1G31850.3 Thale cress cytosol, endoplasmic reticulum, golgi 66.23 67.33
CDY22567 Canola endoplasmic reticulum, golgi 65.74 67.17
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 66.07 67.16
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 66.07 67.16
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 65.91 67.0
KRH07708 Soybean cytosol 65.25 66.89
Bra033872.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plasma membrane 65.09 66.17
KRH07208 Soybean cytosol 62.97 63.91
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 67.05 62.56
CDX98606 Canola vacuole 67.37 62.2
CDY61681 Canola endoplasmic reticulum, golgi 66.56 59.82
CDX78919 Canola cytosol, golgi 66.88 57.99
Bra013374.1-P Field mustard cytosol, golgi 66.72 57.85
GSMUA_Achr5P18010_001 Banana nucleus 70.31 57.62
EER89033 Sorghum cytosol 42.9 42.42
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 40.46 42.32
KXG38879 Sorghum mitochondrion 41.27 41.89
EER96732 Sorghum endoplasmic reticulum, golgi 42.09 41.75
KXG26943 Sorghum plastid 43.07 41.19
EER93951 Sorghum peroxisome 42.74 41.13
EES08791 Sorghum golgi 41.6 40.41
EES05735 Sorghum mitochondrion, plastid 43.07 39.64
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 39.31 39.51
OQU88046 Sorghum plastid 35.4 35.0
OQU91634 Sorghum endoplasmic reticulum, golgi 35.07 34.9
EES03874 Sorghum mitochondrion 35.4 31.54
OQU77908 Sorghum plasma membrane, plastid 31.48 31.08
EES11713 Sorghum plastid 35.4 30.74
EES03991 Sorghum plastid 37.85 29.33
OQU87776 Sorghum endoplasmic reticulum, golgi 31.16 28.21
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 37.19 25.5
OQU77087 Sorghum mitochondrion 34.42 22.86
KXG23110 Sorghum endoplasmic reticulum 34.75 19.58
EER93372 Sorghum mitochondrion 29.36 13.74
Bra031938.1-P Field mustard extracellular, mitochondrion, nucleus, plastid 6.2 12.75
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EntrezGene:8086276UniProt:C5WQL4EnsemblPlants:EER94413ProteinID:EER94413
ProteinID:EER94413.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0032259ProteinID:KXG38801.1PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF984InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3001G281300SUPFAM:SSF53335unigene:Sbi.7095
TMHMM:TMhelixUniParc:UPI0001A82DE0RefSeq:XP_002467415.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:55101626..55105195
Molecular Weight (calculated)
68232.0 Da
IEP (calculated)
9.233
GRAVY (calculated)
-0.330
Length
613 amino acids
Sequence
(BLAST)
001: MKYSKEDKPE RAGGAGAGSR AVPVTLVVIV LCAFSFYLGG IYSTGRSLLD AIQPAPTTLV TLGGGGTTTT TTRRSSDNDQ ARPALAAVAF PECPADLQDY
101: TPCTDPKRWR RYGNYRLSFM ERHCPPPPDR QQCLVPPPKG YKPPIRWPKS KDHCWYRNVP YDWINSQKSN QHWLVKEGDR FRFPGGGTMF PNGVGEYVDL
201: MQGLIPGMRD GTVRTALDTG CGVASWGGDL LGRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSAAFDMA HCSRCLIPWT EFGGLYLLEI
301: HRVLRPGGFW VLSGPPVNYE NRWHGWNTTA QAQKADFDRL KKMLASMCFK LYNMKGDIAV WQKSGDATAC YDKLTAITTP AKCDDSVDPD AAWYVPMRSC
401: VTAPSAKYKK LGLNATPKWP QRLAVAPERI NVVPGSSAAA FKQDDARWKL RAKHYKTLLP ALGSDKIRNV MDMNTVYGGL AGSLIKDPVW VMNVVSSYGP
501: NSLGVVYDRG LIGVNHDWCE AFSTYPRTYD LLHLDGLFTA ESHRCEMKFV LLEMDRILRP TGYAIIREST YFLDSVAPIA KGMRWSCEKH NTENKADKDK
601: ILICQKKLWA GKQ
Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)
001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN
Arabidopsis Description
ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.