Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH76381 Soybean cytosol, golgi, plasma membrane 93.97 93.97
KRH07708 Soybean cytosol 80.23 80.1
KRH07206 Soybean cytosol, golgi, plasma membrane 80.07 79.93
PGSC0003DMT400047515 Potato cytosol, golgi, plasma membrane 77.55 77.55
Os04t0218400-00 Rice cytosol 18.93 77.4
Solyc08g005490.2.1 Tomato nucleus, unclear 77.05 77.05
Solyc08g075870.2.1 Tomato nucleus, unclear 75.88 75.88
Bra023213.1-P Field mustard endoplasmic reticulum, golgi 76.05 75.67
CDY12278 Canola endoplasmic reticulum, golgi 76.05 75.67
GSMUA_Achr4P27550_001 Banana extracellular, plasma membrane 73.03 75.56
PGSC0003DMT400079286 Potato cytosol 75.54 75.54
KRH07208 Soybean cytosol 76.05 75.17
CDY22567 Canola endoplasmic reticulum, golgi 75.21 74.83
AT1G31850.3 Thale cress cytosol, endoplasmic reticulum, golgi 75.54 74.79
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 75.38 74.63
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 75.38 74.63
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 75.38 74.63
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 71.19 73.66
Bra033872.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plasma membrane 74.37 73.63
GSMUA_Achr4P18470_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 70.02 69.9
EER94413 Sorghum plasma membrane 68.34 66.56
TraesCS1D01G202300.2 Wheat endoplasmic reticulum 66.5 65.3
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 66.33 64.81
TraesCS1A01G198600.1 Wheat golgi 66.16 62.9
TraesCS1B01G213600.1 Wheat endoplasmic reticulum 66.0 61.85
GSMUA_Achr5P18010_001 Banana nucleus 71.69 57.22
KRH00647 Soybean cytosol 42.04 46.57
KRG91450 Soybean mitochondrion 44.22 44.0
KRH09116 Soybean endoplasmic reticulum 46.06 43.51
KRH04297 Soybean endoplasmic reticulum 44.39 43.23
KRH57576 Soybean endoplasmic reticulum 44.39 43.23
KRH70718 Soybean endoplasmic reticulum 43.72 43.0
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 45.39 42.81
KRH74853 Soybean endoplasmic reticulum, golgi 43.38 42.67
KRH60099 Soybean cytosol 44.39 42.54
KRH41379 Soybean cytosol 44.39 42.13
KRH45909 Soybean endoplasmic reticulum 42.88 42.11
KRH01812 Soybean extracellular, plasma membrane, vacuole 40.54 42.09
KRG99086 Soybean endoplasmic reticulum 42.71 41.94
KRH48242 Soybean endoplasmic reticulum 44.56 41.5
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 42.88 41.16
KRH63351 Soybean endoplasmic reticulum 41.54 40.92
KRH48238 Soybean endoplasmic reticulum 39.53 39.73
KRH54546 Soybean golgi 38.36 39.62
KRH65147 Soybean endoplasmic reticulum 39.53 39.53
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 40.87 38.73
KRH00643 Soybean endoplasmic reticulum, mitochondrion 38.36 38.42
KRH40535 Soybean plastid 38.36 38.36
KRH32196 Soybean golgi 36.18 36.49
KRH14916 Soybean nucleus 36.18 36.3
KRH73268 Soybean endoplasmic reticulum 36.18 36.3
KRH19571 Soybean golgi 35.68 35.92
KRH69085 Soybean endoplasmic reticulum, golgi 37.19 35.52
KRH34393 Soybean endoplasmic reticulum 36.68 35.27
KRG97692 Soybean plastid 22.61 34.97
KRH31179 Soybean plasma membrane 34.67 34.85
KRG92410 Soybean endoplasmic reticulum, golgi 36.18 34.84
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 36.35 34.78
KRH31698 Soybean endoplasmic reticulum 36.35 34.72
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 36.35 34.12
KRH73069 Soybean endoplasmic reticulum 37.19 33.74
KRH15065 Soybean nucleus 37.52 33.73
KRG97843 Soybean endoplasmic reticulum 37.35 33.63
KRH72067 Soybean plastid 33.67 33.33
KRH16455 Soybean endoplasmic reticulum, golgi 36.68 33.18
KRH18054 Soybean endoplasmic reticulum, golgi 36.52 32.88
KRH31030 Soybean endoplasmic reticulum, plasma membrane 36.85 32.84
KRH33118 Soybean extracellular, golgi, plastid 32.83 32.34
KRH28732 Soybean endoplasmic reticulum 36.52 28.39
KRH64022 Soybean endoplasmic reticulum 38.02 28.02
KRH53915 Soybean endoplasmic reticulum 37.69 27.92
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 38.53 27.68
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 36.35 27.26
KRH69842 Soybean mitochondrion 37.52 27.12
KRH40943 Soybean golgi 38.19 27.08
KRH05816 Soybean endoplasmic reticulum 31.66 27.04
KRH53330 Soybean endoplasmic reticulum 37.19 26.59
KRH15210 Soybean mitochondrion 31.32 26.3
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.68 26.26
Protein Annotations
EntrezGene:100811384Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02005951EnsemblPlantsGene:GLYMA_09G213100GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1L555ProteinID:KRH39667.1EnsemblPlants:KRH39668ProteinID:KRH39668ProteinID:KRH39668.1
PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF984InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335
TMHMM:TMhelixUniParc:UPI0002337E82::::
Description
hypothetical protein
Coordinates
chr9:-:43682939..43688242
Molecular Weight (calculated)
68423.1 Da
IEP (calculated)
8.253
GRAVY (calculated)
-0.446
Length
597 amino acids
Sequence
(BLAST)
001: MKHKDGKPIN QPNKNRTVTL AVTLIALCGF SFYLGGIFCS GKDSVVVNNI QMALDSPKES SGSLQVKPIS FPECSLDYQD YTPCTDPRRW RKYGMYRLTL
101: LERHCPSVFE RKECLVPPPD GYKPPIRWPK SRDECWYRNV PYDWINNQKS DQHWLRKEGE KFLFPGGGTM FPDGVGEYVD LMQDLIPEMK DGTVRTAIDT
201: GCGVASWGGD LLDRGILTIS LAPRDNHEAQ VQFALERGIP AVLGVISTQR LPFPSNSFDM AHCSRCLIPW TEFGGIYLME IHRILRPGGF WILSGPPVNY
301: ERRWRGWNTT IEDQRSDYEK LQELLTSMCF KLYNKKDDIA VWQKAKDNHC YEKLARESYP AKCDDSIEPD SGWYTPLRAC FVVPDPKYKK SGLTYMPKWP
401: ERLLAAPERI TTVHGSSTST FSHDNGKWKK RIQHYKKLLP ELGTDKVRNV MDMNTVYGAF AAALINDPLW VMNVVSSYAP NTLPVVFDRG LIGILHDWCE
501: AFSTYPRTYD LLHLDGLFSA ESHRCEMKHV LLEMDRILRP AGHAIIRESV YFVDAIATIG KGMRWVCRKE NTEYGVDKEK ILICQKKLWH SSNNGSR
Best Arabidopsis Sequence Match ( AT1G31850.1 )
(BLAST)
001: MKSGKQSSQP EKGTSRILSL TVLFIAFCGF SFYLGGIFCS ERDKIVAKDV TRTTTKAVAS PKEPTATPIQ IKSVSFPECG SEFQDYTPCT DPKRWKKYGV
101: HRLSFLERHC PPVYEKNECL IPPPDGYKPP IRWPKSREQC WYRNVPYDWI NKQKSNQHWL KKEGDKFHFP GGGTMFPRGV SHYVDLMQDL IPEMKDGTVR
201: TAIDTGCGVA SWGGDLLDRG ILSLSLAPRD NHEAQVQFAL ERGIPAILGI ISTQRLPFPS NAFDMAHCSR CLIPWTEFGG IYLLEIHRIV RPGGFWVLSG
301: PPVNYNRRWR GWNTTMEDQK SDYNKLQSLL TSMCFKKYAQ KDDIAVWQKL SDKSCYDKIA KNMEAYPPKC DDSIEPDSAW YTPLRPCVVA PTPKVKKSGL
401: GSIPKWPERL HVAPERIGDV HGGSANSLKH DDGKWKNRVK HYKKVLPALG TDKIRNVMDM NTVYGGFSAA LIEDPIWVMN VVSSYSANSL PVVFDRGLIG
501: TYHDWCEAFS TYPRTYDLLH LDSLFTLESH RCEMKYILLE MDRILRPSGY VIIRESSYFM DAITTLAKGI RWSCRREETE YAVKSEKILV CQKKLWFSSN
601: QTS
Arabidopsis Description
Probable methyltransferase PMT20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S7]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.