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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • cytosol 3
  • endoplasmic reticulum 3
  • extracellular 2
  • golgi 3
  • plasma membrane 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
nucleus: 21132161
endoplasmic reticulum: 27224218
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH14916 Soybean nucleus 95.8 95.8
KRG97692 Soybean plastid 49.58 76.42
KRH31179 Soybean plasma membrane 75.8 75.93
CDY10370 Canola cytosol 32.77 70.91
VIT_13s0067g01690.t01 Wine grape endoplasmic reticulum, golgi 70.25 68.98
PGSC0003DMT400069743 Potato endoplasmic reticulum, golgi 68.57 66.56
Bra000181.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 63.36 64.55
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 63.36 64.55
AT2G40280.1 Thale cress extracellular, plasma membrane 63.7 64.35
PGSC0003DMT400077225 Potato plastid 65.38 60.5
Solyc06g051000.2.1 Tomato plastid 64.37 59.66
GSMUA_Achr4P18750_001 Banana endoplasmic reticulum, golgi 61.18 58.52
CDY24913 Canola mitochondrion 63.53 56.25
Solyc05g052500.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 68.91 52.56
Os01t0828300-01 Rice golgi, plastid 59.33 52.37
TraesCS1D01G294500.1 Wheat golgi, plasma membrane, plastid 58.15 51.87
TraesCS1B01G305900.1 Wheat mitochondrion 57.98 51.72
Os05t0472200-01 Rice endoplasmic reticulum, golgi 56.3 51.46
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 56.64 51.37
TraesCS1A01G297000.1 Wheat golgi 57.14 51.13
Zm00001d043012_P018 Maize golgi 58.66 50.22
TraesCS3A01G348800.1 Wheat golgi 57.65 48.38
TraesCS3B01G380800.1 Wheat plastid 58.32 48.33
TraesCS3D01G342700.1 Wheat golgi 58.15 48.32
OQU87776 Sorghum endoplasmic reticulum, golgi 52.6 46.23
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 57.82 45.99
Zm00001d010599_P002 Maize endoplasmic reticulum, plasma membrane, plastid 56.13 44.95
KRH32196 Soybean golgi 38.49 38.68
KRH19571 Soybean golgi 38.49 38.62
KRH00647 Soybean cytosol 34.96 38.59
KRH53915 Soybean endoplasmic reticulum 51.09 37.72
KRH48238 Soybean endoplasmic reticulum 37.65 37.71
KRH28732 Soybean endoplasmic reticulum 48.57 37.63
KRH34393 Soybean endoplasmic reticulum 39.16 37.52
KRH01812 Soybean extracellular, plasma membrane, vacuole 36.13 37.39
KRH40535 Soybean plastid 37.48 37.35
KRH64022 Soybean endoplasmic reticulum 50.76 37.28
KRH73069 Soybean endoplasmic reticulum 41.18 37.23
KRH65147 Soybean endoplasmic reticulum 37.31 37.19
KRG92410 Soybean endoplasmic reticulum, golgi 38.66 37.1
KRH00643 Soybean endoplasmic reticulum, mitochondrion 37.14 37.08
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 38.82 37.02
KRH31698 Soybean endoplasmic reticulum 38.82 36.96
KRH18054 Soybean endoplasmic reticulum, golgi 41.18 36.95
KRH15065 Soybean nucleus 41.18 36.9
KRH16455 Soybean endoplasmic reticulum, golgi 40.84 36.82
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 39.16 36.64
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 50.92 36.33
KRH39668 Soybean endoplasmic reticulum 36.3 36.18
KRH76381 Soybean cytosol, golgi, plasma membrane 36.3 36.18
KRH53330 Soybean endoplasmic reticulum 50.76 36.17
KRH69085 Soybean endoplasmic reticulum, golgi 37.98 36.16
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 48.24 36.06
KRH31030 Soybean endoplasmic reticulum, plasma membrane 40.5 35.97
KRH07206 Soybean cytosol, golgi, plasma membrane 36.13 35.95
KRG97843 Soybean endoplasmic reticulum 39.83 35.75
KRH07708 Soybean cytosol 35.8 35.62
KRH69842 Soybean mitochondrion 49.41 35.59
KRH70718 Soybean endoplasmic reticulum 36.13 35.42
KRH74853 Soybean endoplasmic reticulum, golgi 35.97 35.26
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 49.08 35.14
KRH45909 Soybean endoplasmic reticulum 35.63 34.87
KRH04297 Soybean endoplasmic reticulum 35.8 34.75
KRG91450 Soybean mitochondrion 34.96 34.67
KRH72067 Soybean plastid 35.13 34.66
KRH07208 Soybean cytosol 35.13 34.6
KRH40943 Soybean golgi 48.91 34.56
KRG99086 Soybean endoplasmic reticulum 35.29 34.54
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 36.47 34.44
KRH57576 Soybean endoplasmic reticulum 35.29 34.26
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 35.63 34.08
KRH05816 Soybean endoplasmic reticulum 40.0 34.05
KRH63351 Soybean endoplasmic reticulum 34.62 33.99
KRH09116 Soybean endoplasmic reticulum 35.97 33.86
KRH48242 Soybean endoplasmic reticulum 36.47 33.85
KRH33118 Soybean extracellular, golgi, plastid 34.45 33.83
KRH60099 Soybean cytosol 35.13 33.55
KRH15210 Soybean mitochondrion 40.0 33.47
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 35.46 33.33
KRH41379 Soybean cytosol 35.13 33.23
KRH54546 Soybean golgi 31.26 32.18
Protein Annotations
EntrezGene:100800390Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02001273EnsemblPlantsGene:GLYMA_02G263500GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1JIE7EnsemblPlants:KRH73268ProteinID:KRH73268ProteinID:KRH73268.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF887InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI0002336E2ASEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:44905409..44909750
Molecular Weight (calculated)
68127.0 Da
IEP (calculated)
8.677
GRAVY (calculated)
-0.297
Length
595 amino acids
Sequence
(BLAST)
001: MAILAEDFFK ERKYPFIVTL LILLICVTLF LFSFNHTTSN TVAFYSVIQE KPPLNPSQAS ADYTANPKVQ ELPPNVTNVR FDWKLCKEPQ NVDFIPCLDN
101: FKAIKALKSR RHMEHRERHC PETRLHCLLS LPKGYKVPVP WPKSRDKIWY DNVPYSKLVE YKKDQHWVVK SGKYLVFPGG GTQFKDGVDH YIKFIEKTLP
201: AIKWGKHTRV ILDVGCGVAS FGGYLLDKNV ITMSFAPKDE HEAQIQFALE RGIPATLSVI GTQKLTFPDN GFDLIHCARC RVHWDADGGK PLYELNRILR
301: PGGFFAWSAT PVYRDDERDQ KVWNAMVDIT KAMCWKVVAK GHDSSGIGLV IYQKPTSSSC YEKREENNPP LCENKDGKNI SWYARLDSCL TPLPVDGKGN
401: LQSWPKPWPQ RLTSKPPSLP TDSDAKDKFF KDSKRWSELV SDVYMNGLSI KWSSVRNVMD MNAGYAGFAA ALIDLPVWVM NVVPIDVPDT LSIIMDRGLI
501: GMYHDWCESF NTYPRTYDLL HASFLFKYLE QRCDIVDVAV EIDRILRPNG YLVVQDSVEI LNKLNPILRS LNWSVTLHQN QFLVGRKGFW RPTSS
Best Arabidopsis Sequence Match ( AT2G40280.1 )
(BLAST)
001: MAISVQHVVV LLLSTLLIAI TFFLFTSDNA RFPFPSLSTT DYYTPIPKSP IPHRIVDVSS DQTPQKMKLN TSLEVGELKW DLCKGAESVD YIPCLDNYAA
101: IKQLKSRRHM EHRERHCPEP SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ FKFGVTHYVE FIEKALPSIK
201: WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG
301: FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL
401: WPKRLVSVKP QSISVKAETL KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD TLSVVYDRGL IGVYHDWCES
501: VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR
Arabidopsis Description
Probable methyltransferase PMT23 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ3]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.