Factsheet for PGSC0003DMT400069743

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	97.39	76.54
PGSC0003DMT400077225	Potato	plastid	73.74	70.3
CDY10370	Canola	cytosol	31.0	69.09
KRH14916	Soybean	nucleus	66.88	68.91
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	67.86	68.65
KRH73268	Soybean	endoplasmic reticulum	66.56	68.57
KRH31179	Soybean	plasma membrane	64.6	66.67
KRG97692	Soybean	plastid	41.6	66.06
AT2G40280.1	Thale cress	extracellular, plasma membrane	61.83	64.35
CDY07611	Canola	endoplasmic reticulum, extracellular, vacuole	61.17	64.21
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	61.17	64.21
GSMUA_Achr4P18750_001	Banana	endoplasmic reticulum, golgi	61.66	60.77
AT3G56080.1	Thale cress	endoplasmic reticulum, vacuole	59.38	59.67
CDY43341	Canola	endoplasmic reticulum, golgi, vacuole	58.08	58.84
CDY24913	Canola	mitochondrion	60.85	55.51
CDX76062	Canola	endoplasmic reticulum, golgi, vacuole	58.24	54.09
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	57.91	53.22
HORVU1Hr1G070430.8	Barley	golgi, plasma membrane, vacuole	56.93	53.2
TraesCS1B01G305900.1	Wheat	mitochondrion	57.75	53.07
Os01t0828300-01	Rice	golgi, plastid	58.24	52.97
TraesCS1A01G297000.1	Wheat	golgi	57.1	52.63
Os05t0472200-01	Rice	endoplasmic reticulum, golgi	55.46	52.23
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	57.59	52.22
Zm00001d043012_P018	Maize	golgi	57.26	50.5
TraesCS3A01G348800.1	Wheat	golgi	57.75	49.93
TraesCS3B01G380800.1	Wheat	plastid	58.24	49.72
TraesCS3D01G342700.1	Wheat	golgi	57.42	49.16
HORVU3Hr1G088050.14	Barley	endoplasmic reticulum, plasma membrane	57.59	47.19
OQU87776	Sorghum	endoplasmic reticulum, golgi	51.71	46.82
Zm00001d010599_P002	Maize	endoplasmic reticulum, plasma membrane, plastid	55.79	46.03
PGSC0003DMT400059283	Potato	cytosol	34.42	38.02
PGSC0003DMT400017929	Potato	endoplasmic reticulum, golgi	36.54	36.72
PGSC0003DMT400079286	Potato	cytosol	35.56	36.52
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	35.4	36.35
PGSC0003DMT400050242	Potato	golgi	35.89	35.71
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	35.89	35.6
PGSC0003DMT400071375	Potato	mitochondrion	34.75	35.56
PGSC0003DMT400069783	Potato	endoplasmic reticulum	39.15	35.4
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	35.56	35.22
PGSC0003DMT400059933	Potato	golgi	46.66	35.18
PGSC0003DMT400006139	Potato	nucleus	45.51	35.01
PGSC0003DMT400080300	Potato	endoplasmic reticulum, golgi	34.75	34.8
PGSC0003DMT400016774	Potato	endoplasmic reticulum, golgi	34.58	34.64
PGSC0003DMT400071370	Potato	endoplasmic reticulum, golgi	35.4	34.12
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	34.26	34.09
PGSC0003DMT400009110	Potato	cytosol	45.51	34.02
PGSC0003DMT400014851	Potato	cytosol	33.93	33.33
PGSC0003DMT400037042	Potato	plastid	34.26	32.46
PGSC0003DMT400065051	Potato	plastid	34.42	32.26
PGSC0003DMT400030542	Potato	plastid	33.12	31.87
PGSC0003DMT400027588	Potato	endoplasmic reticulum, plasma membrane, plastid	29.36	31.41
PGSC0003DMT400009562	Potato	golgi, mitochondrion	38.66	30.46

Protein Annotations

EntrezGene:102581117	Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	UniProt:M1CL20	PFAM:PF03141
EnsemblPlantsGene:PGSC0003DMG400027121	PGSC:PGSC0003DMG400027121	EnsemblPlants:PGSC0003DMT400069743	PANTHER:PTHR10108	PANTHER:PTHR10108:SF887	InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002959289	RefSeq:XP_006355647.1	SEG:seg

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027121]

Coordinates

chr5:+:47776267..47781982

Molecular Weight (calculated)

69737.3 Da

IEP (calculated)

6.819

GRAVY (calculated)

-0.312

Length

613 amino acids

Sequence
(BLAST)

001: MAISSMKNLF KERKIPFLFS FFLLLIFVTF ILISNSQKSP VFIATDISQH HSETPISSNP IISQTQLNPI TKDSNPSEDF GLNDTKNDEL GVENFDWKLC
101: KGAVAVDYIP CLDNSEAIKA LKSRRHMEHR ERHCPDPSPR CLIPLPDGYK LPVPWPKSRD MIWYNSVPHP KLVEYKKDQN WVVKSGDYLV FPGGGTQFKD
201: GVTNYIESIE KTFPEIDWGK HIRVILDVGC GVASFGGYLL DKNVITVSLA PKDEHEAQIQ FALERGIPAT LSVIGTQKLA FPDNAYDMIH CARCRVHWDG
301: DGGKPLMELN RILRPGGFFV WSATPVYRDD ERDKKVWKAM VALTEAICWK VVKKTFFDSA GVGLVIYQKP VSSSCYENRR ENNPPLCDQN NRSNSSWYAS
401: LDSCLVPLPT SSSGNTYEWP APWPQRLNNK PERLSQKTDN EDIFDEDTKH WAALVSDVYL GGLSINWSSV RNVMDMNAGY GGFASAIIDR PLWVMNVVPI
501: SEPDTLSIIF DRGLIGIYHD WCESFNTYPR TYDLLHSSFH FGNLTQRCDV VEVVVEMDRI VRPGGYVLVQ DTMPMLNKLS SILQSLHWSV NLQQEQFLVA
601: KKGFWRPHDK VRK

Best Arabidopsis Sequence Match ( AT2G40280.1 )
(BLAST)

001: MAISVQHVVV LLLSTLLIAI TFFLFTSDNA RFPFPSLSTT DYYTPIPKSP IPHRIVDVSS DQTPQKMKLN TSLEVGELKW DLCKGAESVD YIPCLDNYAA
101: IKQLKSRRHM EHRERHCPEP SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ FKFGVTHYVE FIEKALPSIK
201: WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG
301: FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL
401: WPKRLVSVKP QSISVKAETL KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD TLSVVYDRGL IGVYHDWCES
501: VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR

Arabidopsis Description

Probable methyltransferase PMT23 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ3]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.