Factsheet for PGSC0003DMT400009562

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 1
golgi 2
nucleus 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g080360.2.1	Tomato	nucleus	97.04	97.04
KRH05816	Soybean	endoplasmic reticulum	58.48	65.09
KRH15210	Soybean	mitochondrion	59.0	64.56
VIT_18s0001g12470.t01	Wine grape	mitochondrion	59.64	64.09
CDY26666	Canola	mitochondrion	56.17	60.95
Bra025737.1-P	Field mustard	mitochondrion	55.91	60.42
CDY67390	Canola	mitochondrion	55.66	60.14
AT1G19430.1	Thale cress	mitochondrion	55.78	59.94
GSMUA_Achr6P05660_001	Banana	mitochondrion	52.06	58.11
TraesCS5D01G418500.1	Wheat	mitochondrion	47.43	51.04
TraesCS5B01G413400.3	Wheat	mitochondrion	47.04	50.69
TraesCS5A01G408700.1	Wheat	mitochondrion	46.53	50.56
HORVU5Hr1G099090.3	Barley	mitochondrion	46.4	50.42
Os03t0775200-01	Rice	mitochondrion	46.92	50.07
Zm00001d034250_P002	Maize	mitochondrion	45.37	48.29
PGSC0003DMT400069743	Potato	endoplasmic reticulum, golgi	30.46	38.66
PGSC0003DMT400059283	Potato	cytosol	26.09	36.58
PGSC0003DMT400077225	Potato	plastid	30.21	36.55
PGSC0003DMT400059933	Potato	golgi	36.5	34.93
PGSC0003DMT400006139	Potato	nucleus	35.73	34.88
PGSC0003DMT400069783	Potato	endoplasmic reticulum	29.43	33.78
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	26.09	32.79
PGSC0003DMT400009110	Potato	cytosol	34.32	32.56
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	25.58	32.2
PGSC0003DMT400079286	Potato	cytosol	24.55	31.99
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	24.16	31.49
PGSC0003DMT400071375	Potato	mitochondrion	24.16	31.39
PGSC0003DMT400071370	Potato	endoplasmic reticulum, golgi	25.58	31.29
PGSC0003DMT400017929	Potato	endoplasmic reticulum, golgi	24.16	30.82
PGSC0003DMT400080300	Potato	endoplasmic reticulum, golgi	24.16	30.72
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	24.29	30.68
PGSC0003DMT400016774	Potato	endoplasmic reticulum, golgi	24.04	30.56
PGSC0003DMT400050242	Potato	golgi	24.16	30.52
PGSC0003DMT400037042	Potato	plastid	25.32	30.45
PGSC0003DMT400065051	Potato	plastid	25.45	30.28
PGSC0003DMT400014851	Potato	cytosol	24.04	29.97
PGSC0003DMT400030542	Potato	plastid	24.42	29.83
PGSC0003DMT400027588	Potato	endoplasmic reticulum, plasma membrane, plastid	20.57	27.92
EER93372	Sorghum	mitochondrion	46.02	27.33

Protein Annotations

EntrezGene:102590716	Gene3D:3.40.50.150	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0032259	UniProt:M0ZWI1	PFAM:PF03141	EnsemblPlantsGene:PGSC0003DMG401003730	PGSC:PGSC0003DMG401003730
EnsemblPlants:PGSC0003DMT400009562	PANTHER:PTHR10108	PANTHER:PTHR10108:SF733	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TMHMM:TMhelix	UniParc:UPI000296913D	RefSeq:XP_006341939.1	SEG:seg	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401003730]

Coordinates

chr4:-:69758270..69763566

Molecular Weight (calculated)

88428.9 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.678

Length

778 amino acids

Sequence
(BLAST)

001: MRKHNTALTR FGRKVKGSYQ SYGLGVKLAA VVILGLCFVF IWSVFSPSSY SVAYQRDTFD DIREPISSAN RKKVTSLVPS TKKEQPHNKK LKHRSSSGEK
101: KKRVDRSSLP SKSGGWHKND KSGVDRKRKG EDLKLPKKAD EVKEQELEGS ETDVLEKENE EEKIGNDKQE EEKKVVEVKE NEKEKTENNS KQEGEGVDGK
201: ETEKEEIESN KEEEGEGEGT VDGNEGNGEL ANTEELDQES AEKVEDEDED EKAKDNGKKD KNLGPLFDPK AHYTWNLCST RSKHNYIPCI DFESASGKLQ
301: NYRHHERSCP KAPQMCLVPL PPGGYETPVS WPESKSKILY KNVAHLKLEA FVKKGSWVVE SGDYLAFPTN QSIPKGGIQH YLDFIEEMVP DIEWGKNIRV
401: VLDIGCEDSS FGASLLEKDV LTLTLGLKDD LVDLAQVALE RGFPAVVTPF GTRRLPFPSG VFDAIHCNDC HASWHSNGGK HLIEMNRILR PGGYFILSSK
501: HNSIEVEEAM STLTASICWN ILADKTDEIS DIRIKLYQKP QANDIYQLRR KKVPPLCKAN ENPDASWYVP IKSCLHTIPE SIEQRGTEWP EEWPKRLETY
601: PDWMNNREKL IADSEHWKAI VDHSYLVGLG IDWSNIRNVM DMKAINGGFA AALAQQKVWV MNVIPVHAPN TLPVVFERGL IGVYHDWCEA FGTYPRSYDL
701: LHADHLFSRL KNRCKHPIVI VVEMDRILRP GGWGIIRDKV EILDPLEKIL RSLHWEIRMT FAKDKEGILC AQKTMWRP

Best Arabidopsis Sequence Match ( AT1G19430.3 )
(BLAST)

001: MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP

Arabidopsis Description

Probable methyltransferase PMT28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.